Division of Food Microbiology

  1. 2014
  2. Published
  3. Published

    Antibiotic treatment affects intestinal permeability and gut microbial composition in female Wistar rats dependent on antibiotic class. / Tulstrup, Monica Vera-Lise; Christensen, Ellen Gerd; Carvalho, Vera; Licht, Tine Rask; Bahl, Martin Iain.

    2014. Poster session presented at Microbiome/Microbiota R&D and Business Collaboration Forum, London, United Kingdom.

    Publication: Research - peer-reviewPoster – Annual report year: 2014

  4. Accepted
  5. Published

    Characterization of the Emerging Salmonella 4,[5],12:i:- in Danish Animal Production.. / Argüello, Hector; Sørensen, Gitte; Carvajal, Ana; Baggesen, Dorte Lau; Rubio, Pedro; Pedersen, Karl.

    In: Foodborne Pathogens and Disease, Vol. 11, No. 5, 2014, p. 366-372.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  6. Published
  7. Published
  8. Published

    Effect of gut microbiota on intestinal integrity : Effect of gut microbiota on intestinal integrity. / Christensen, Ellen Gerd; Bahl, Martin Iain (Supervisor); Licht, Tine Rask (Supervisor).

    Søborg : National Food Institute, Technical University of Denmark, 2014. 157 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2014

  9. Published

    Enumeration of Salmonellae in Table Eggs, Pasteurized Egg Products, and Egg-Containing Dishes by Using Quantitative Real-Time PCR. / Jakočiūnė, Džiuginta; Pasquali, Frédérique; da Silva, Cristiana Soares; Löfström, Charlotta; Hoorfar, Jeffrey; Klein, Günter; Manfreda, Gerardo; Olsen, John Elmerdahl.

    In: Applied and Environmental Microbiology, Vol. 80, No. 5, 2014, p. 1616-1622.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  10. Published

    Establishment of Intestinal Microbiota during Early Life: a Longitudinal, Explorative Study of a Large Cohort of Danish Infants. / Bergström, Anders; Skov, Thomas Hjort; Bahl, Martin Iain; Roager, Henrik Munch; Christensen, Line Brinch; Ejlerskov, Katrine Tschentscher; Mølgaard, Christian; Michaelsen, Kim F.; Licht, Tine Rask.

    In: Applied and Environmental Microbiology, Vol. 80, No. 9, 2014, p. 2889-2900.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  11. Published

    Evaluation of pre-PCR processing approaches for enumeration of Salmonella enterica in naturally contaminated animal feed. / Schelin, Jenny; Andersson, Gunnar; Vigre, Håkan; Norling, Börje; Häggblom, Per; Hoorfar, Jeffrey; Rådström, Peter; Löfström, Charlotta.

    In: Journal of Applied Microbiology, Vol. 116, No. 1, 2014, p. 167-178.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  12. Published

    Lactobacillus acidophilus NCFM affects vitamin E acetate metabolism and intestinal bile acid signature in monocolonized mice. / Roager, Henrik Munch; Sulek, Karolina; Skov, Kasper; Frandsen, Henrik Lauritz; Smedsgaard, Jørn; Wilcks, Andrea; H. Skov, Thomas; Granato Villas-Boas, Silas; Licht, Tine Rask.

    In: Gut Microbes, Vol. 5, No. 3, 2014, p. 1-8.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  13. Published
  14. Published
  15. Published

    Molecular serotyping of salmonella isolates. / Boel, Jeppe; Löfström, Charlotta.

    Annual Report on Zoonoses in Denmark 2013. Søborg : DTU Food, 2014. p. 11-11 (Annual Report on Zoonoses in Denmark).

    Publication: Research - peer-reviewBook chapter – Annual report year: 2014

  16. Published

    Outbreak of Salmonella Choleraesuis in Danish pig herds. / Löfström, Charlotta; Sørensen, Gitte; Baggesen, Dorte Lau.

    Annual Report on Zoonoses in Denmark 2013. Søborg : DTU Food, 2014. p. 28-28 (Annual Report on Zoonoses in Denmark).

    Publication: Research - peer-reviewBook chapter – Annual report year: 2014

  17. Published

    Projekt 15: Tilpasning af den offentlige kontrol - risikobaseret kødkontrol. / Bollerslev, Anne Mette; Hansen, Tina Beck; Hald, Tine; Nauta, Maarten; Aabo, Søren.

    Søborg : DTU Fødevareinstituttet, 2014. 33 p.

    Publication: CommissionedReport – Annual report year: 2014

  18. Published

    Projekt 5 - Udvikling af proceshygiejnekriterier. / Bollerslev, Anne Mette; Hansen, Tina Beck; Nauta, Maarten; Aabo, Søren.

    Søborg : DTU Fødevareinstituttet, 2014. 15 p.

    Publication: CommissionedReport – Annual report year: 2014

  19. Published

    Salmonella enterica subsp. enterica serovar Typhimurium isolates from human and veterinary sources in Bulgaria. / Mateva, Gergana; Löfström, Charlotta; Pedersen, Karl; Sørensen, Gitte; Daskalov, Hristo; Alexandar, Irina.

    2014. Poster session presented at 3rd Balkan Scientific Conference on Biology, Plovdiv, Bulgaria.

    Publication: Research - peer-reviewPoster – Annual report year: 2014

  20. Published

    Salmonella enterica subsp. enterica serovar Typhimurium isolates from human and veterinary sources in Bulgaria. / Mateva, Gergana; Löfström, Charlotta; Pedersen, Karl; Sørensen, Gitte; Daskalov, Hristo; Alexandar, Irina.

    2014. Abstract from 3rd Balkan Scientific Conference on Biology, Plovdiv, Bulgaria.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2014

  21. Published

    Salmonella Typhimurium DT41 in poultry. / Löfström, Charlotta; Hintzmann, Ann-Sofie; Sørensen, Gitte; Baggesen, Dorte Lau.

    Annual Report on Zoonoses in Denmark 2013. Søborg : DTU Food, 2014. p. 29-29 (Annual Report on Zoonoses in Denmark).

    Publication: Research - peer-reviewBook chapter – Annual report year: 2014

  22. Published

    Sample processing. / Bridle, Helen; Jacobsson, Karin; Schultz, Anna Charlotte.

    Waterborne pathogens: Detection methods and applications. ed. / Helen Bridle. Elsevier Science, 2014. p. 67-114.

    Publication: Research - peer-reviewBook chapter – Annual report year: 2014

  23. Published

    Second meal effect on appetite and fermentation of wholegrain rye foods. / Ibrügger, Sabine; Vigsnæs, Louise Kristine; Blennow, Andreas; Škuflić, Dan; Raben, Anne; Lauritzen, Lotte; Kristensen, Mette.

    In: Appetite, Vol. 80, 2014, p. 248-256.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  24. Published

    Sikker nedkøling. / Hansen, Tina Beck.

    2014. Poster session presented at Temadag "Prædiktiv mikrobiologi - et centralt redskab til produktudvikling og dokumentation af fødevaresikkerhed", Lyngby, Denmark.

    Publication: Research - peer-reviewPoster – Annual report year: 2014

  25. Published

    Sikker opvarmning. / Hansen, Tina Beck.

    2014. Poster session presented at Temadag "Prædiktiv mikrobiologi - et centralt redskab til produktudvikling og dokumentation af fødevaresikkerhed", Lyngby, Denmark.

    Publication: Research - peer-reviewPoster – Annual report year: 2014

  26. Published

    Sikker smørrebrøds- og sandwichproduktion. / Hansen, Tina Beck.

    2014. Poster session presented at Temadag "Prædiktiv mikrobiologi - et centralt redskab til produktudvikling og dokumentation af fødevaresikkerhed", Lyngby, Denmark.

    Publication: Research - peer-reviewPoster – Annual report year: 2014

  27. Published

    Source attribution of human campylobacteriosis in Denmark. / Boysen, Louise; Rosenquist, Hanne; Rosenquist, J. T.; Nielsen, E. M.; Sørensen, Gitte; Nordentoft, Steen; Hald, Tine.

    In: Epidemiology and Infection, Vol. 142, No. 8, 2014, p. 1599-1608.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  28. Published

    Starter Cultures: Uses in the Food Industry.. / Hansen, Egon Bech.

    Encyclopedia of Food Microbiology. Vol. 3 Elsevier Science, 2014. p. 529-534.

    Publication: Research - peer-reviewEncyclopedia chapter – Annual report year: 2014

  29. Published

    The Effects of Temperature and Innate Immunity on Transmission of Campylobacter jejuni (Campylobacterales: Campylobacteraceae) Between Life Stages of Musca domestica (Diptera: Muscidae). / Bahrndorff, Simon; Gill, C.; Lowenberger, C.; Skovgard, H.; Hald, Birthe.

    In: Journal of Medical Entomology, Vol. 51, No. 3, 2014, p. 670-677.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  30. Published

    Whole genome sequencing. / Torpdahl, Mia; Löfström, Charlotta; Møller Nielsen, Eva.

    Annual Report on Zoonoses in Denmark 2013. Søborg : DTU Food, 2014. p. 16-19 (Annual Report on Zoonoses in Denmark).

    Publication: Research - peer-reviewBook chapter – Annual report year: 2014

  31. 2013
  32. Published

    Academic courses and workshops. / Hedman, Johannes; Skiby, Jeffrey Edward; Knutsson, Rickard; Nordgaard, Anders ; Blomström, Anne-Lie; Karlsson, Oskar; Rådström, Peter.

    Uppsala, Sweden : National Veterinary Institute (SVA), 2013. 15 p.

    Publication: ResearchReport – Annual report year: 2013

  33. Published

    Actionable Knowledge and Strategic Decision Making for Bio- and Agroterrorism Threats: Building a Collaborative Early Warning Culture. / Mårtensson, Per-Åke; Hedström, Lars; Sundelius, Bengt; Skiby, Jeffrey E.; Elbers, Armin; Knutsson, Rickard.

    In: Biosecurity and Bioterrorism, Vol. 11, No. 1, 2013, p. S46-S54.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  34. Published

    A Danish Salmonella Bareilly outbreak investigated by the use of whole genome sequencing. / Torpdahl, M.; Kiil, K.; Litrup, E.; Sørensen, Gitte; Aarestrup, Frank Møller.

    10th International Meeting on Microbial Epidemiological Markers (IMMEM-10) - Abstract Book. Paris, France, 2013. p. 215.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  35. Published

    A long-lasting outbreak of Salmonella Typhimurium U323 associated with several pork products, Denmark, 2010. / Kuhn, K. G. ; Sørensen, Gitte; Torpdahl, M.; Jensen, T.; Gubbels, S.; Bjergager, G. O.; Wingstrand, Anne; Porsbo, Lone Jannok; Ethelberg, S.

    In: Epidemiology and Infection, Vol. 141, No. 2, 2013, p. 260-268.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  36. Published

    A multiplex bead-based suspension array assay for interrogation of phylogenetically informative single nucleotide polymorphisms for Bacillus anthracis. / Thierry, Simon; Hamidjaja, Raditijo A. ; Girault, Guillaume ; Löfström, Charlotta; Ruuls, Robin; Sylviane, Derzelle.

    In: Journal of Microbiological Methods, Vol. 95, No. 3, 2013, p. 357-365.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  37. Published

    Animal Botulism Outcomes in the AniBioThreat Project. / Woudstra, Cédric; Tevell Åberg, Annica; Skarin, Hanna; Anniballi, Fabrizio; De Medici, Dario; Bano, Luca; Koene, Miriam; Löfström, Charlotta; Hansen, Trine; Hedeland, Mikael; Fach, Patrick.

    In: Biosecurity and Bioterrorism, Vol. 11, No. 1, 2013, p. S177-S182.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  38. Published

    Anthrax. / Derzelle, Sylviane; Hamidjaja, Raditijo A.; Hansen, Trine; Boene, Miriam; Löfström, Charlotta; Thierry, Simon; Ågren, Joakim.

    Uppsala, Sweden : National Veterinary Institute (SVA), 2013. 21 p.

    Publication: ResearchReport – Annual report year: 2013

  39. Published

    Antibiotic resistant enterococci—Tales of a drug resistance gene trafficker. / Werner, Guido; Coque, Teresa M.; Franz, Charles M.A.P.; Grohmann, Elisabeth; Hegstad, Kristin; Jensen, Lars Bogø; van Schaik, Willem; Weaver, Keith.

    In: International Journal of Medical Microbiology, Vol. 303, No. 6-7, 2013, p. 360-379.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  40. Published
  41. Published
  42. Published
  43. Published

    Characterization of Clostridium perfringens isolates from healthy turkeys and from turkeys with necrotic enteritis. / Lyhs, U.; Perko-Mäkelä, P.; Kallio, H.; Brockmann, A.; Heinikainen, S.; Tuuri, H.; Pedersen, Karl.

    In: Poultry Science, Vol. 92, No. 7, 2013, p. 1750-1757.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  44. Published

    Characterization of the infant gut microbiota in a cohort of 330 Danish children at 9, 18 and 36 months by quantitative PCR array (GULDA) analysis. / Bergström, Anders; Skov, Thomas; Bahl, Martin Iain; Roager, Henrik Munch; Fleischer Michaelsen, Kim; Licht, Tine Rask.

    2013. Poster session presented at Cell Symposia, Lisbon, Portugal.

    Publication: Research - peer-reviewPoster – Annual report year: 2013

  45. Published

    CLK review - Salmonella i svine- og oksekød. / Aabo, Søren.

    Review over resultater af Fødevarestyrelsens CKL projekter 2000-2010. Søborg : Danmarks Tekniske Universitet, Fødevareinstituttet, 2013. p. 21-40.

    Publication: ResearchBook chapter – Annual report year: 2013

  46. Published

    CLK review VTEC - verotoksin producerende Escherichia coli. / Boel, Jeppe.

    Review over resultater af Fødevarestyrelsens CKL projekter 2000-2010. Søborg : Danmarks Tekniske Universitet, Fødevareinstituttet, 2013. p. 41-42.

    Publication: ResearchBook chapter – Annual report year: 2013

  47. Published

    ClpP deletion causes attenuation of Salmonella Typhimurium virulence through mis-regulation of RpoS and indirect control of CsrA and the SPI genes. / Knudsen, Gitte Maegaard; Olsen, John E.; Aabo, Søren; Barrow, Paul; Rychlik, Ivan; Thomsen, Line E.

    In: Microbiology, Vol. 159, No. Part 7, 2013, p. 1497-1509.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  48. Published

    Combining predictive microbiology with cold-enrichment in minced pork for quantifying low levels of Salmonella Typhimurium DT104. / Møller, C. O. A.; Aabo, Søren; Hansen, Tina Beck.

    8th International Conference on Predicive Modelling in Food - ICPMF8: conference proceedings. ed. / F. Tenehaus-Aziza; M. Ellouze. 2013. p. 23-24.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  49. Published

    Composting poultry manure by fly larvae (Musca domestica) eliminates Campylobacter jejuni from the manure. / Nordentoft, Steen; Hald, Birthe.

    CHRO 2013: 17th International Workshop on Campylobacter, Helicobacter and Related Organisms. United Kingdom : University of Aberdeen, 2013. p. 130-131.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  50. Published

    Correlation between Salmonella and hygiene indicators in the Danish fresh pork chain. / Hansen, Tina Beck; Sandø, Gudrun; Aabo, Søren.

    2013. Paper presented at 5th International Cold Chain Management Workshop, Bonn, Germany.

    Publication: Research - peer-reviewPaper – Annual report year: 2013

  51. Published

    DANMAP 2012 : DANMAP 2012 - Use of antimicrobial agents and occurrence of antimicrobial resistance in bacteria from food animals, food and humans in Denmark . / Agersø, Yvonne; Dalhoff Andersen, Vibe; Helwigh, Birgitte; Borck Høg, Birgitte; Jensen, Lars Bogø; Jensen, Vibeke Frøkjær; Korsgaard, Helle; Larsen, Lars Stehr; Pedersen, Karl; Seyfarth, Anne Mette; Dalby, Tine; Hammerum, Anette M.; Hoffmann, Steen; Gaardbo Kuhn, Katrin; Larsen, Anders Rhod; Laursen, Maja; Møller Nielsen, Eva ; Olsen, Stefan S.; Petersen, Andreas; Skjøt-Rasmussen, Line; Skov, Robert L.; Slotved, Hans-Christian; Torpdahl, Mia.

    DANMAP, 2013. 118 p. (Dansk Veterinærtidsskrift).

    Publication: ResearchReport – Annual report year: 2013

  52. Published
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