Division of Food Microbiology

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  1. 2013
  2. Published

    A long-lasting outbreak of Salmonella Typhimurium U323 associated with several pork products, Denmark, 2010. / Kuhn, K. G. ; Sørensen, Gitte; Torpdahl, M.; Jensen, T.; Gubbels, S.; Bjergager, G. O.; Wingstrand, Anne; Porsbo, Lone Jannok; Ethelberg, S.

    In: Epidemiology and Infection, Vol. 141, No. 2, 2013, p. 260-268.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  3. Published

    Campylobacter contamination and the relative risk of illness from organic broiler meat in comparison with conventional broiler meat. / Rosenquist, Hanne; Boysen, Louise; Krogh, Anne Louise; Jensen, Annette Nygaard; Nauta, Maarten.

    In: International Journal of Food Microbiology, Vol. 162, No. 3, 2013, p. 226-230.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  4. Published

    Characterization of the infant gut microbiota in a cohort of 330 Danish children at 9, 18 and 36 months by quantitative PCR array (GULDA) analysis. / Bergström, Anders; Skov, Thomas; Bahl, Martin Iain; Roager, Henrik Munch; Fleischer Michaelsen, Kim; Licht, Tine Rask.

    2013. Poster session presented at Cell Symposia, Lisbon, Portugal.

    Publication: Research - peer-review › Poster – Annual report year: 2013

  5. Published

    CLK review - Salmonella i svine- og oksekød. / Aabo, Søren.

    In: Review over resultater af Fødevarestyrelsens CKL projekter 2000-2010. Søborg : DTU Fødevareinstituttet, 2013. p. 21-40.

    Publication: Research › Book chapter – Annual report year: 2013

  6. Published

    CLK review VTEC - verotoksin producerende Escherichia coli. / Boel, Jeppe.

    In: Review over resultater af Fødevarestyrelsens CKL projekter 2000-2010. Søborg : DTU Fødevareinstituttet, 2013. p. 41-42.

    Publication: Research › Book chapter – Annual report year: 2013

  7. Published

    Dietary Xylooligosaccharide Downregulates IFN-γ and the Low-Grade Inflammatory Cytokine IL-1β Systemically in Mice123. / Hansen, Camilla H. F.; Frøkiær, Hanne; Christensen, Annette G.; Bergström, Anders; Licht, Tine Rask; Hansen, Axel K.; Metzdorff, Stine B.

    In: Journal of Nutrition, Vol. 143, No. 4, 2013, p. 533-540.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  8. Published

    Effect of diet on the human gut microbiota. / Bahl, Martin Iain.

    2013. Abstract from 8th Danish Conference on Biotechnology and Molecular Biology, Vejle, Denmark.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2013

  9. Published

    Effect of natural microbiota on growth of Salmonella spp. in fresh pork – A predictive microbiology approach. / Møller, Cleide; Ilg, Y.; Aabo, Søren; Christensen, Bjarke Bak; Dalgaard, Paw; Hansen, Tina Beck.

    In: Food Microbiology, Vol. 34, No. 2, 2013, p. 284-295.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  10. Published

    Effects of feeding finisher pigs with chicory or lupine feed for one week or two weeks before slaughter with respect to levels of Bifidobacteria and Campylobacter. / Jensen, Annette Nygaard; Hansen, L. L.; Baggesen, Dorte Lau; Mølbak, Lars.

    In: Animal, Vol. 7, No. 1, 2013, p. 66-74.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  11. Published

    Enterotypes influence temporal changes in gut microbiota. / Roager, Henrik Munch; Licht, Tine Rask; Kellebjerg Poulsen, Sanne; Meinert Larsen, Thomas; Bahl, Martin Iain.

    2013. Abstract from Cell Symposia, Lisbon, Portugal.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2013

  12. Published

    Enterotypes influence temporal changes in gut microbiota. / Roager, Henrik Munch; Licht, Tine Rask; Kellebjerg Poulsen, Sanne; Meinert Larsen, Thomas; Bahl, Martin Iain.

    2013. Abstract from 8th Danish Conference on Biotechnology and Molecular Biology, Vejle, Denmark.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2013

  13. Published

    Evaluation of growth potential of Listeria monocytogenes and Salmonella in a sandwich environment. / Birk, Tina; Aabo, Søren; Hansen, Tina Beck.

    2013. Abstract from 10th Symposium on Food Microbiology, Helsingør, Denmark.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2013

  14. Published

    Evaluation of pre-PCR processing approaches for enumeration of Salmonella enterica in naturally contaminated animal feed. / Löfström, Charlotta; Schelin, J.; Andersson, G.; Vigre, Håkan; Norling, B.; Häggblom, P.; Hoorfar, Jeffrey; Rådström, P.

    2013. Poster session presented at MedVetNet 2013, Lyngby, Denmark.

    Publication: Research - peer-review › Poster – Annual report year: 2013

  15. Published

    Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing. / Zankari, Ea; Hasman, Henrik; Kaas, Rolf Sommer; Seyfarth, Anne Mette; Agersø, Yvonne; Lund, Ole; Larsen, Mette Voldby; Aarestrup, Frank Møller.

    In: Journal of Antimicrobial Chemotherapy, Vol. 68, No. 4, 2013, p. 771-777.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  16. Published

    Hygiejneparametre. / Andersen, Jens Kirk; Hansen, Tina Beck.

    In: Review over resultater af Fødevarestyrelsens CKL projekter 2000-2010. Søborg : DTU Fødevareinstituttet, 2013. p. 44-48.

    Publication: Research › Book chapter – Annual report year: 2013

  17. Published

    In vitro growth of four individual human gut bacteria on oligosaccharides produced by chemoenzymatic synthesis.. / Vigsnæs, Louise Kristine; Nakai, Hiroyuki; Hemmingsen, Lene; Andersen, Joakim Mark; Lahtinen, Sampo J; Rasmussen, Louise Enggaard; Abou Hachem, Maher ; Petersen, Bent O.; Duus, Jens Øllgaard; Meyer, Anne S.; Licht, Tine Rask; Svensson, Birte.

    In: Food & Function, Vol. 4, No. 5, 2013, p. 784-793.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  18. Published

    Lipid hydrolysis products affect the composition of microbiota isolated from infant fecal samples after in vitro fermentation. / Bennike, Rikke Mette Guldhammer; Licht, Tine Rask; Hellgren, Lars.

    2013. Abstract from Cell Symposia, Lisbon, Portugal.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2013

  19. Published

    Lipid hydrolysis products affect the composition of microbiota isolated from infant fecal samples after in vitro fermentation. / Bennike, Rikke Mette Guldhammer; Licht, Tine Rask; Hellgren, Lars.

    2013. Abstract from 27th Nordic Lipid Symposium, Helsinki, Finland.

    Publication: Research › Conference abstract for conference – Annual report year: 2013

  20. Published

    Microbiotas from UC patients display altered metabolism and reduced ability of LAB to colonize mucus. / Vigsnæs, Louise Kristine; van den Abbeele, Pieter; Sulek, Karolina; Frandsen, Henrik Lauritz; Steenholdt, Casper; Brynskov, Jørn; Vermeiren, Joan; van de Wiele, Tom; Licht, Tine Rask.

    In: Scientific Reports, Vol. 3, 2013.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  21. Published

    Organic acids for control of Salmonella in different feed materials. / Koyuncu, Sevinc; Andersson, Mats Gunnar; Löfström, Charlotta; Skandamis, Panagiotis N.; Gounadaki, Antonia; Zentek, Jürgen; Häggblom, Per .

    In: B M C Veterinary Research, Vol. 9, 2013, p. 81.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  22. Published

    Pre-PCR Processing Strategies. / Hedman, Johannes; Lövenklev, Maria; Wolffs, Petra; Löfström, Charlotta; Knutsson, Rickard; Rådström, Peter.

    In: PCR Technology : Current Innovations. ed. / Tania Nolan; Stephen A. Bustin. 3. ed. Taylor & Francis, 2013. p. 3-18.

    Publication: Research - peer-review › Book chapter – Annual report year: 2013

  23. Published

    Pre-storage of gelified reagents in a lab-on-a-foil system for rapid nucleic acid analysis. / Yi, Sun; Høgberg, Jonas; Christine, Thanner; Florian, Laouenan; Monsalve, Lisandro G.; Rodriguez, Sonia; Cao, Cuong; Wolff, Anders; Ruano-Lopez, Jesus M.; Bang, Dang Duong.

    In: Lab On a Chip, Vol. 13, No. 8, 2013, p. 1509-1514.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  24. Published

    Real-time PCR Detection of Food-borne Pathogenic Salmonella spp.. / Malorny, B.; Mäde, D.; Löfström, Charlotta.

    In: Real-Time PCR in Food Science: Current Technology and Applications. ed. / David Rodríguez-Lázaro. Caister Academic Press, 2013. p. 57-77.

    Publication: Research › Book chapter – Annual report year: 2013

  25. Published

    Short videos to enhance student learning in microbiological laboratory exercises. / Löfström, Charlotta; Jensen, Lars Bogø; Josefsen, Mathilde Hartmann.

    2013. Poster session presented at Conceive Design Implement Operate (CDIO2013), Cambridge, MA., United States.

    Publication: Research - peer-review › Poster – Annual report year: 2013

  26. Published

    Use of real-time PCR on faecal samples for detection of sub-clinical Salmonella infection in cattle did not improve the detection sensitivity compared to conventional bacteriology. / Jensen, Annette Nygaard; Nielsen, L.R.; Baggesen, Dorte Lau.

    In: Veterinary Microbiology, Vol. 163, No. 3-4, 2013, p. 373-377.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  27. In press

    Validation of a real-time PCR based method for detection of Clostridium botulinum types C, D and their mosaic variants C-D and D-C in a multicenter collaborative trial. / Woudstra, C.; Skarin, H.; Anniballi, F.; Auricchio, B.; De Medici, D.; Bano, L.; Drigo, I.; Hansen, Trine; Löfström, Charlotta; Hamidjaja, R.; van Rotterdam, B. J. ; Koene, M.; Bäyon-Auboyer, M.-H.; Buffereau, J.-P.; Fach, P.

    In: Anaerobe, 2013.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  28. Published

    Yersinia enterocolitica. / Aabo, Søren.

    In: Review over resultater af Fødevarestyrelsens CKL projekter 2000-2010. Søborg : DTU Fødevareinstituttet, 2013. p. 43.

    Publication: Research › Book chapter – Annual report year: 2013

  29. 2012
  30. Published

    Acid stress response and protein induction in Campylobacter jejuni isolates with different acid tolerance.. / Birk, Tina; Wik, Monica Takamiya; Lametsch, René; Knøchel, Susanne.

    In: B M C Microbiology, Vol. 12, No. 174, 2012.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  31. Published

    A comparative analysis of the intestinal metagenomes present in guinea pigs (Cavia porcellus) and humans (Homo sapiens). / Hildebrand, Falk; Ebersbach, Tine; Nielsen, Henrik Bjørn; Li, Xiaoping; Sonne, Si Brask; dos Santos, Marcelo Bertalan Quintanilha; Dimitrov, Peter; Madsen, Lise; Qin, Junjie; Wang, Jun; Raes, Jeroen; Kristiansen, Karsten; Licht, Tine Rask.

    In: B M C Genomics, Vol. 13, No. 514, 2012.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  32. Published

    A proactive attempt to control an outbreak of foodborne disease in humans after detection of Salmonella during surveillance and control of pork in Denmark. / Wingstrand, Anne; Jensen, T.; Sørensen, Gitte; Gubbels, S. ; Porsbo, Lone Jannok; Ethelberg, S.; Bjerager, G. O. ; Kjeldsen, Marianne Kirstine; Torpdahl, M.; Kuhn, K. G.

    In: Case studies in food safety and authenticity: Lessons from real-life situations. ed. / J. Hoorfar. Woodhead Publishing, 2012. (Woodhead Publishing Series in Food Science, Technology and Nutrition, Vol. 240).

    Publication: Research - peer-review › Book chapter – Annual report year: 2012

  33. Published

    Bacterial Impact on the Gut Metabolome. / Sulek, Karolina; Licht, Tine Rask (Main supervisor); Wilcks, Andrea (Supervisor); Skov, Thomas Hjort (Supervisor); Smedsgaard, Jørn (Supervisor).

    Søborg : DTU Food, 2012. 161 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2013

  34. Published

    Boosting exports of fresh meat by using faster laboratory methods in Denmark. / Löfström, Charlotta; Josefsen, Mathilde Hartmann; Hoorfar, Jeffrey; Hansen, F.

    In: Case studies in food safety and authenticity: Lessons from real-life situations. ed. / J. Hoorfar. Woodhead Publishing, 2012. p. 267-275 (Woodhead Publishing Series in Food Science, Technology and Nutrition; No. 240).

    Publication: Research - peer-review › Book chapter – Annual report year: 2012

  35. Published

    Case studies in food safety and authenticity: Lessons from real-life situations. / Hoorfar, Jeffrey (Editor).

    Woodhead Publishing, 2012. 408 p. (Woodhead Publishing Series in Food Science, Technology and Nutrition).

    Publication: Research - peer-review › Book – Annual report year: 2012

  36. Published

    Complete Genome Sequence of the Porcine Isolate Enterococcus faecalis D32. / Zischka, Melanie; Kuenne, Carsten; Blom, Jochen; Dabrowski, Piotr W.; Linke, Burkhard; Hain, Torsten; Nitsche, Andreas; Goesmann, Alexander; Larsen, Jesper; Jensen, Lars Bogø; Witte, Wolfgang; Werner, Guido.

    In: Journal of Bacteriology, Vol. 194, No. 19, 2012, p. 5490-5491.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  37. Published

    "Conferm" - a new tool to predict reduction of pathogens during production of fermented and matured sausages. / Gunvig, A.; Hansen, F.; Borgaard, C.; Hansen, Tina Beck; Aabo, Søren.

    In: XXIII FoodMicro 2012: Abstract Book. ed. / Dilek Heperkan; Funda Karbancioglu-Guler; Ceren Daskaya-Dikmen. Istanbul : Istanbul Technical University, 2012. p. 91.

    Publication: Research - peer-review › Conference abstract in proceedings – Annual report year: 2012

  38. Published

    Correlation between Salmonella and hygiene indicators in the Danish fresh pork chain. / Aabo, Søren; sandø, G.; Hansen, Tina Beck.

    In: XXIII FoodMicro 2012: Abstract Book. ed. / Dilek Heperkan; Funda Karbancioglu-Guler; Ceren Daskaya-Dikmen. Istanbul : Istanbul Technical University, 2012. p. 394.

    Publication: Research - peer-review › Conference abstract in proceedings – Annual report year: 2012

  39. Published

    Correlation between Salmonella and hygiene indicators in the Danish fresh pork chain. / Aabo, Søren; Sandø, G.; Hansen, Tina Beck.

    In: 2012 Symposium of The Danish Microbiological Society . DMS, 2012. p. 50.

    Publication: Research - peer-review › Conference abstract in proceedings – Annual report year: 2012

  40. Published

    DANMAP 2011 : DANMAP 2011 - Use of antimicrobial agents and occurrence of antimicrobial resistance in bacteria from food animals, food and humans in Denmark . / Agersø, Yvonne; Hald, Tine; Helwigh, Birgitte; Borck Høg, Birgitte; Jensen, Lars Bogø; Jensen, Vibeke Frøkjær; Korsgaard, Helle; Larsen, Lars Stehr; Seyfarth, Anne Mette; Struve, Tina; Hammerum, A. M.; Kuhn, K. G.; Lambertsen, L. M.; Larsen, A. R.; Laursen, M.; Nielsen, E. M.; Olsen, S. S.; Petersen, A.; Skjøt-Rasmussen, L.; Skov, R. L.; Torpdahl, M.

    DANMAP, 2012. 138 p. (Dansk Veterinærtidsskrift).

    Publication: Research › Report – Annual report year: 2012

  41. Published

    Decreased colonization of fecal Clostridium coccoides/Eubacterium rectale species from ulcerative colitis patients in an in vitro dynamic gut model with mucin environment. / Vermeiren, Joan; Van den Abbeele, Pieter; Laukens, Debby; Vigsnæs, Louise Kristine; De Vos, Martine; Boon, Nico; Van de Wiele, Tom.

    In: F E M S Microbiology Ecology, Vol. 79, No. 3, 2012, p. 685-696.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  42. Published

    Design and data analysis of experimental trials to test vaccine candidates against zoonotic pathogens in animals: the case of a clinical trial against campylobacter in broilers. / Garcia Clavero, Ana Belén; Bahrndorff, Simon; Hald, Birthe; Hoorfar, Jeffrey; Madsen, M.; Vigre, Håkan.

    In: Expert Review of Vaccines, Vol. 11, No. 10, 2012, p. 1179-1188.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  43. Published

    Diagnostic herd sensitivity using environmental samples. / Vigre, Håkan; Josefsen, Mathilde Hartmann; Seyfarth, Anne Mette; Agersø, Yvonne.

    2012. Abstract from 13th International Symposium on Veterinary Epidemiology and Economics, Maastricht, Netherlands.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2012

  44. Published

    Documenting the 'terroir' aspects of award-winning Danish conserves: a model for the development of authentic food products. / Christensen, Laurids Siig; Hoorfar, Jeffrey; Sorensen, J.; Bisgaard, S.

    In: Case studies in food safety and authenticity: lessons from real-life situations. Woodhead Publishing, 2012. p. 342-348.

    Publication: Research › Book chapter – Annual report year: 2012

  45. Published

    Effect of environmental stress factors on the uptake and survival of Campylobacter jejuni in Acanthamoeba castellanii. / Bui, Thanh Xuan; Qvortrup, Klaus; Wolff, Anders; Bang, Dang Duong; Creuzenet, Carole.

    In: B M C Microbiology, Vol. 12, 2012.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  46. Published

    Enabling Passive Immunization as an Alternative to Antibiotics for Controlling Enteric Infections in Production Animals. / Heegaard, Peter M. H.; Hald, Birthe; Madsen, M.; Hoorfar, Jeffrey; Larsen, Lars Erik; Breum, Solvej Østergaard; Bisgaard-Frantzen, K.; Bendix Hansen, M.; Lihme, A.

    2012. Poster session presented at International Symposium: Alternatives to antibiotics (ATA), Paris, France.

    Publication: Research - peer-review › Poster – Annual report year: 2012

  47. Published

    Enumeration of Salmonella enterica in naturally contaminated animal feed samples by flotation prior to real-time quantitative PCR. / Schelin, Jenny; Norling, Börje; Vigre, Håkan; Rådström, Peter; Löfström, Charlotta.

    2012. Poster session presented at 23rd International ICFMH Symposium, FoodMicro 2012, Istanbul, Turkey.

    Publication: Research - peer-review › Poster – Annual report year: 2012

  48. Published

    Enumeration of Salmonella enterica in naturally contaminated animal feed samples by flotation prior to real-time quantitative PCR. / Löfström, Charlotta; Schelin, Jenny; Vigre, Håkan; Norling, Börje; Hoorfar, Jeffrey; Rådström, Peter .

    In: XXIII FoodMicro 2012: Abstract Book. ed. / Dilek Heperkan; Funda Karbancioglu-Guler; Ceren Daskaya-Dikmen. Istanbul : Istanbul Technical University, 2012. p. 260.

    Publication: Research - peer-review › Conference abstract in proceedings – Annual report year: 2012

  49. Published

    Estimation of the variation that can be attributed to different levels in a clinical trial of a vaccine. / Garcia Clavero, Ana Belén; Bahrndorff, Simon; Hald, Birthe; Madsen, M.; Vigre, Håkan.

    In: Book of Abstracts of the 13th International Symposium on Veterinary Epidemiology and Economics. Wageningen Academic Publishers, 2012. p. 393.

    Publication: Research - peer-review › Conference abstract in proceedings – Annual report year: 2012

  50. Published

    Estimation of the variation that can be attributed to different levels in a clinical trial of a vaccine against Campylobacter in broilers. / Garcia Clavero, Ana Belén; Bahrndorff, Simon; Hald, Birthe; Madsen, M.; Vigre, Håkan.

    2012. Poster session presented at 13th International Symposium on Veterinary Epidemiology and Economics, Maastricht, Netherlands.

    Publication: Research - peer-review › Poster – Annual report year: 2012

  51. Published

    Evaluation of growth potential of Listeria monocytogenes and Salmonella in a sandwich environment. / Birk, Tina; Møller, Cleide; Bollerslev, Anne Mette; Aabo, Søren; Karapetian, Diana; Hansen, Tina Beck.

    In: 2012 Symposium of The Danish Microbiological Society . DMS, 2012. p. 46.

    Publication: Research - peer-review › Conference abstract in proceedings – Annual report year: 2012

  52. Published

    Evaluation of intestinal sampling sites in pigs at slaughter for assessing antibiotic resistance level in swine herds. / Jensen, Annette Nygaard; Thanou, Olga ; Axelsdottir, Aslaug ; Gerling Thomsen, Signe ; Aabo, Søren.

    In: XXIII FoodMicro 2012: Abstract Book. Istanbul, 2012.

    Publication: Research - peer-review › Conference abstract in proceedings – Annual report year: 2012

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