Division of Epidemiology and Microbial Genomics

  1. 2014
  2. Published

    Activation and polar sequestration of PopA, a c-di-GMP effector protein involved in Caulobacter crescentus cell cycle control. / Ozaki, Shogo; Schalch-Moser, Annina; Zumthor, Ludwig; Manfredi, Pablo; Ebbensgaard, Anna Elisabeth; Schirmer, Tilman; Jenal, Urs.

    In: Molecular Microbiology, Vol. 94, No. 3, 2014, p. 580-594.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  3. Published
  4. Published

    Annual Report on Zoonoses in Denmark 2013. / Sørensen, Anna Irene Vedel (Editor); Helwigh, Birgitte (Editor); Müller, Luise.

    Søborg : DTU Food, 2014. 69 p. (Annual Report on Zoonoses in Denmark).

    Publication: ResearchPh.D. thesis – Annual report year: 2014

  5. Published

    Antimicrobial resistance of zoonotic and commensal bacteria in Europe: The missing link between consumption and resistance in veterinary medicine. / Garcia-Migura, Lourdes; Hendriksen, Rene S.; Fraile, Lorenzo; Aarestrup, Frank Møller.

    In: Veterinary Microbiology, Vol. 170, No. 1-2, 2014, p. 1-9.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  6. Published
  7. E-pub ahead of print
  8. Published

    Burden of diseases estimates associated to different red meat cooking practices. / Berjia, Firew Lemma; Poulsen, Morten; Nauta, Maarten.

    In: Food and Chemical Toxicology, Vol. 66, 2014, p. 237-244.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  9. Published

    Characterization of Extended spectrum beta-lactamases (ESBL)-producing Escherichia coli obtained from Danish pigs, pig farmers and their families from farms with high or no consumption of 3rd or 4th generation cephalosporins. / Hammerum, Anette M.; Larsen, Jesper; Dalhoff Andersen, Vibe; Lester, Camilla H; Skytte, Timmy S. Skovgaard; Hansen, Frank ; Olsen, Stefan S.; Mordhorst, Hanne; Skov, Robert L.; Aarestrup, Frank Møller; Agersø, Yvonne.

    In: Journal of Antimicrobial Chemotherapy, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  10. Published

    Characterization of methicillin-resistant Staphylococcus aureus Sequence Type 398. / Christiansen, Mette Theilgaard; Aarestrup, Frank Møller (Main supervisor); Hasman, Henrik (Supervisor); Agersø, Yvonne (Supervisor).

    Søborg : National Food Institute, Technical University of Denmark, 2014. 204 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2014

  11. Published
  12. Published

    Detection and linkage to mobile genetic elements of tetracycline resistance gene tet(M) in Escherichia coli isolates from pigs. / Jurado-Rabadan, Sonia; de la Fuente, Ricardo; Ruiz-Santa-Quiteria, Jose A.; Orden, Jose A.; de Vries, Lisbeth Elvira; Agersø, Yvonne.

    In: B M C Veterinary Research, Vol. 10, No. 1, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  13. Published

    Diversity and antimicrobial susceptibility of Salmonella enterica serovars isolated from pig farms in Ibadan, Nigeria. / Fashae, Kayode; Hendriksen, Rene S.

    In: Folia Microbiologica, Vol. 59, No. 1, 2014, p. 69-77.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  14. Published

    Effect of subinhibitory concentrations of four commonly used biocides on the conjugative transfer of Tn916 in Bacillus subtilis. / Seier-Petersen, Maria Amalie; Jasni, A.; Aarestrup, Frank Møller; Vigre, Håkan; Mullany, P.; Roberts, A. P.; Agersø, Yvonne.

    In: Journal of Antimicrobial Chemotherapy, Vol. 69, No. 2, 2014, p. 343-348.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  15. Published

    Emergence and clonal dissemination of Salmonella enterica serovar Enteritidis causing salmonellosis in Mauritius. / Issack, Mohammad I.; Hendriksen, Rene S.; Hyytiae-Trees, Eija; Svendsen, Christina Aaby; Mikoleit, Matthew.

    In: Journal of Infection in Developing Countries, Vol. 8, No. 4, 2014, p. 454-460.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  16. Published

    Evaluation of pre-PCR processing approaches for enumeration of Salmonella enterica in naturally contaminated animal feed. / Schelin, Jenny; Andersson, Gunnar; Vigre, Håkan; Norling, Börje; Häggblom, Per; Hoorfar, Jeffrey; Rådström, Peter; Löfström, Charlotta.

    In: Journal of Applied Microbiology, Vol. 116, No. 1, 2014, p. 167-178.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  17. Published

    Evaluation of whole genome sequencing for outbreak detection of Salmonella enterica. / Leekitcharoenphon, Pimlapas; Nielsen, Eva M.; Kaas, Rolf Sommer; Lund, Ole; Aarestrup, Frank Møller.

    In: P L o S One, Vol. 9, No. 2, e87991, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  18. Published
  19. Published

    Extended-Spectrum-Beta-Lactamases, AmpC Beta-Lactamases and Plasmid Mediated Quinolone Resistance in Klebsiella spp. from Companion Animals in Italy. / Donati, Valentina; Feltrin, Fabiola; Hendriksen, Rene S.; Svendsen, Christina Aaby; Cordaro, Gessica; Garcia-Fernandez, Aurora; Lorenzetti, Serena; Lorenzetti, Raniero; Battisti, Antonio; Franco, Alessia.

    In: PLOS ONE, Vol. 9, No. 3, e90564, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  20. Published

    Finding the Optimum Scenario in Risk-benefit Assessment: An Example on Vitamin D. / Berjia, Firew Lemma; Hoekstra, J.; Verhagen, H.; Poulsen, Morten; Andersen, Rikke; Nauta, Maarten.

    In: European Journal of Nutrition and Food Safety, Vol. 4, No. 4, 2014, p. 558-576.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  21. Published
  22. Published

    Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes. / Nielsen, Henrik Bjørn; Almeida, Mathieu; Juncker, Agnieszka; Rasmussen, Simon; Li, Junhua; Sunagawa, Shinichi; Plichta, Damian Rafal; Gautier, Laurent; Pedersen, Anders Gorm; Emmanuelle, Le Chatelier; Pelletier, Eric; Bonde, Ida; Nielsen, Trine; Manichanh, Chaysavanh; Arumugam, Manimozhiyan; Batto, Jean-Michel; dos Santos, Marcelo Bertalan Quintanilha; Blom, Nikolaj; Borruel, Natalia; Burgdorf, Kristoffer S.; Boumezbeur, Fouad; Casellas, Francesc; Doré, Joël; Dworzynski, Piotr; Guarner, Francisco; Hansen, Torben; Hildebrand, Falk; Kaas, Rolf Sommer; Kennedy, Sean; Kristiansen, Karsten; Kultima, Jens Roat; Léonard, Pierre; Levenez, Florence; Lund, Ole; Moumen, Bouziane; Denis, Le Paslier; Pons, Nicolas; Pedersen, Oluf; Prifti, Edi; Qin, Junjie; Raes, Jeroen; Sørensen, Søren; Tap, Julien; Tims, Sebastian; Ussery, David; Yamada, Takuji; Renault, Pierre; Sicheritz-Pontén, Thomas; Bork, Peer; Wang, Jun; Brunak, Søren; Ehrlich, S. Dusko.

    In: Nature Biotechnology, Vol. 32, No. 8, 2014, p. 822-828.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  23. E-pub ahead of print

    In Silico Detection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing. / Carattoli, Alessandra; Zankari, Ea; García-Fernández, Aurora; Larsen, Mette Voldby; Lund, Ole; Villa, Laura; Aarestrup, Frank Møller; Hasman, Henrik.

    In: Antimicrobial Agents and Chemotherapy, Vol. 58, No. 7, 2014, p. 3895-3903.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  24. Published

    Microbiological Safety of Meat: Salmonella spp.. / Wingstrand, Anne; Aabo, Søren.

    Encyclopedia of Meat Sciences 2e. ed. / Carrick Devine; Michael Dikemann. Vol. 2 Elsevier Science, 2014. p. 367-375.

    Publication: Research - peer-reviewBook chapter – Annual report year: 2014

  25. Published

    Persistence of fluoroquinolone-resistant Salmonella enterica serovar Kentucky from poultry and poultry sources in Nigeria. / Raufu, Ibrahim A.; Fashae, Kayode; Ameh, James A.; Ambali, AbdulGaniyu; Ogunsola, Folashade T.; Coker, Akitoye O.; Hendriksen, Rene S.

    In: Journal of Infection in Developing Countries, Vol. 8, No. 3, 2014, p. 384-388.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  26. Published

    Phylogenetic Analysis of Staphylococcus aureus CC398 Reveals a Sub-Lineage Epidemiologically Associated with Infections in Horses. / Abdelbary, Mohamed M. H.; Wittenberg, Anne; Cuny, Christiane; Layer, Franziska; Kurt, Kevin; Wieler, Lothar H.; Walther, Birgit; Skov, Robert; Larsen, Jesper; Hasman, Henrik; Fitzgerald, J. Ross; Smith, Tara C.; Wagenaar, J. A.; Pantosti, Annalisa; Hallin, Marie; Struelens, Marc J.; Edwards, Giles; Boese, R.; Nuebel, Ulrich; Witte, Wolfgang.

    In: PLOS ONE, Vol. 9, No. 2, e88083, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  27. Published

    Projekt 15: Tilpasning af den offentlige kontrol - risikobaseret kødkontrol. / Bollerslev, Anne Mette; Hansen, Tina Beck; Hald, Tine; Nauta, Maarten; Aabo, Søren.

    Søborg : DTU Fødevareinstituttet, 2014. 33 p.

    Publication: CommissionedReport – Annual report year: 2014

  28. Published

    Projekt 5 - Udvikling af proceshygiejnekriterier. / Bollerslev, Anne Mette; Hansen, Tina Beck; Nauta, Maarten; Aabo, Søren.

    Søborg : DTU Fødevareinstituttet, 2014. 15 p.

    Publication: CommissionedReport – Annual report year: 2014

  29. Published
  30. Published
  31. Published
  32. Published

    Report of the 5th External Quality Assurance System on Identification and Typing of Methicillin resistant Staphylococcus aureus (MRSA), 2013. / Cavaco, Lina; Karlsmose, Susanne; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    Kgs. Lyngby : National Food Institute, Technical University of Denmark, 2014. 29 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  33. Published

    Solving the Problem of Comparing Whole Bacterial Genomes across Different Sequencing Platforms. / Kaas, Rolf Sommer; Leekitcharoenphon, Pimlapas; Aarestrup, Frank Møller; Lund, Ole.

    In: PLOS ONE, Vol. 9, No. 8, e104984, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  34. Published

    Source attribution of human campylobacteriosis in Denmark. / Boysen, Louise; Rosenquist, Hanne; Rosenquist, J. T.; Nielsen, E. M.; Sørensen, Gitte; Nordentoft, Steen; Hald, Tine.

    In: Epidemiology and Infection, Vol. 142, No. 8, 2014, p. 1599-1608.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  35. Published

    Source Attribution of Human Salmonellosis: An Overview of Methods and Estimates. / Pires, Sara Monteiro; Vieira, Antonio R.; Hald, Tine; Cole, Dana.

    In: Foodborne Pathogens and Disease, Vol. 11, No. 9, 2014, p. 667-676.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  36. Published

    Spatio-temporal analysis of Salmonella surveillance data in Thailand. / Coutinho Calado Domingues, Ana Rita; Vieira, Antonio; Hendriksen, Rene S.; Pulsrikarn, C.; Aarestrup, Frank Møller.

    In: Epidemiology and Infection, Vol. 142, No. 8, 2014, p. 1614-1624.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  37. Published
  38. E-pub ahead of print
  39. Published

    The 14th EURL-AR Proficiency Test - enterococci, staphylococci and E. coli 2013. / Cavaco, Lina; Karlsmose, Susanne; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    1 ed. Kgs. Lyngby : National Food Institute, Technical University of Denmark, 2014. 95 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  40. Published

    The 15th EURL-AR Proficiency Test Salmonella, Campylobacter and genotypic characterisation 2013. / Karlsmose, Susanne; Cavaco, Lina; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    1 ed. Kgs. Lyngby : National Food Institute, Technical University of Denmark, 2014. 69 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  41. Published
  42. Published

    The External Quality Assurance System of the WHO Global Foodborne Infections Network: Year 2012. / Hendriksen, Rene S.; Karlsmose, Susanne; Jensen, Arne Bent; Aarestrup, Frank Møller.

    Lyngby : National Food Institute, Technical University of Denmark, 2014. 27 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  43. Published

    The Role of the st313-td Gene in Virulence of Salmonella Typhimurium ST313. / Herrero-Fresno, Ana; Wallrodt, Inke; Leekitcharoenphon, Pimlapas; Olsen, John Elmerdahl; Aarestrup, Frank Møller; Hendriksen, Rene S.

    In: PLOS ONE, Vol. 9, No. 1, e84566, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  44. Published

    TRiMiCri Tutorial - Tool for evaluation of Rissk based Microbiological Criteria : TRiMiCri. / Nauta, Maarten; Lund, Jan.

    Søborg : National Food Institute, Technical University of Denmark, 2014. 33 p.

    Publication: Research - peer-reviewReport – Annual report year: 2014

  45. E-pub ahead of print
  46. 2013
  47. Published

    A brief multi-disciplinary review on antimicrobial resistance in medicine and its linkage to the global environmental microbiota.. / Cantas, L.; Shah, Syed Q A; Cavaco, Lina; Manaia, C. M.; Walsh, F.; Popowska, M.; Garelick, H.; Bürgmann, H.; Sørum, H.

    In: Frontiers in Microbiology, Vol. 4, 2013, p. 96.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  48. Published

    Active Ulcerative Colitis is associated with low prevalence of Blastocystis and Dientamoeba fragilis infection. / Munk Petersen, Andreas; Rune Stensvold, Christen; Mirsepasi, Hengameh; Engberg, Jørgen; Friis-Møller, Alice; Porsbo, Lone Jannok; Hammerum, Anette M.; Nordgaard-Lassen, Inge; Vedel Nielsen, Henrik; Angeliki Krogfelt, Karen.

    In: Scandinavian Journal of Gastroenterology, Vol. 48, No. 5, 2013, p. 638-639.

    Publication: Research - peer-reviewLetter – Annual report year: 2013

  49. Published

    A Danish Salmonella Bareilly outbreak investigated by the use of whole genome sequencing. / Torpdahl, M.; Kiil, K.; Litrup, E.; Sørensen, Gitte; Aarestrup, Frank Møller.

    10th International Meeting on Microbial Epidemiological Markers (IMMEM-10) - Abstract Book. Paris, France, 2013. p. 215.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  50. Published

    A long-lasting outbreak of Salmonella Typhimurium U323 associated with several pork products, Denmark, 2010. / Kuhn, K. G. ; Sørensen, Gitte; Torpdahl, M.; Jensen, T.; Gubbels, S.; Bjergager, G. O.; Wingstrand, Anne; Porsbo, Lone Jannok; Ethelberg, S.

    In: Epidemiology and Infection, Vol. 141, No. 2, 2013, p. 260-268.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  51. Published
  52. Published
  53. Published

    Animal and public health surveillance of infectious diseases. / Aarestrup, Frank Møller.

    Med-Vet-Net Association International Scientific Conference DTU, Lyngby, Denmark, 24-25 June 2013: Abstract Book. Lyngby, 2013. p. 13-14.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  54. Published

    Annual Report on Zoonoses in Denmark 2012. / Helwigh, Birgitte.

    The National Food Institute, Technical University of Denmark, 2013. 72 p. (Annual Report on Zoonoses in Denmark).

    Publication: Research - peer-reviewReport – Annual report year: 2013

  55. Published

    Antibiotikaresistens. / Agersø, Yvonne.

    Review over resultater af Fødevarestyrelsens CKL projekter 2000-2010. Søborg : Danmarks Tekniske Universitet, Fødevareinstituttet, 2013. p. 49-50.

    Publication: ResearchBook chapter – Annual report year: 2013

  56. Published

    Antimicrobial resistance and molecular epidemiology of streptococci from bovine mastitis. / Rato, Márcia G.; Bexiga, Ricardo; Florindo, Carlos; Cavaco, Lina M.; Vilela, Cristina L.; Santos-Sanches, Ilda.

    In: Veterinary Microbiology, Vol. 161, No. 3-4, 2013, p. 286-294.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  57. Published

    Assessing the Applicability of Currently Available Methods for Attributing Foodborne Disease to Sources, Including Food and Food Commodities. / Pires, Sara Monteiro.

    In: Foodborne Pathogens and Disease, Vol. 10, No. 3, 2013, p. 206-213.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  58. Published

    Attributing foodborne salmonellosis in humans to animal reservoirs in the European Union using a multi-country stochastic mode. / de Knegt, Leonardo; Pires, Sara Monteiro; Hald, Tine.

    Med-Vet-Net Association International Scientific Conference DTU, Lyngby, Denmark, 24-25 June 2013: Abstract Book. Lyngby, 2013. p. 51.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  59. Published

    Bayesian predictive risk modeling of microbial criteria for Campylobacter in broilers. / Nauta, Maarten; Ranta, J.; Mikkelä, A.; Tuominen, P.

    2013. Poster session presented at 29th European Meeting of Statisticians, Budapest, Hungary.

    Publication: Research - peer-reviewPoster – Annual report year: 2013

  60. Published
  61. Published

    Campylobacter vaccination of poultry: Clinical trials, quantitative microbiological methods and decision support tools for the control of Campylobacter in poultry. / Garcia Clavero, Ana Belén; Vigre, Håkan (Main supervisor); Læsø Madsen, Anders; Christensen, Laurids Siig.

    Søborg : National Food Institute, Technical University of Denmark, 2013. 170 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2013

  62. Published
  63. Published

    Characterization of IncN plasmids carrying blaCTX-M-1 and qnr genes in Escherichia coli and Salmonella from animals, the environment and humans. / Dolejska, Monika; Villa, Laura; Hasman, Henrik; Hansen, Lars; Carattoli, Alessandra.

    In: Journal of Antimicrobial Chemotherapy, Vol. 68, No. 2, 2013, p. 333-339.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  64. Published

    CLK review - Campylobacter. / Rosenquist, Hanne; Boysen, Louise.

    Review over resultater af Fødevarestyrelsens CKL projekter 2000-2010. Søborg : Danmarks Tekniske Universitet, Fødevareinstituttet, 2013. p. 4-20.

    Publication: ResearchBook chapter – Annual report year: 2013

  65. Published

    Community incidence of pathogen-specific gastroenteritis: reconstructing the surveillance pyramid for seven pathogens in seven European Union member states. / Haagsma, J. A.; Geenen, P. L.; Ethelberg, S.; Fetsch, A.; Hansdotter, F.; Jansen, A.; Korsgaard, Helle; O'Brien, S. J.; Scavia, G.; Spitznagel, H.; Stefanoff, P.; Tam, C. C.; Havelaar, A. H.

    In: Epidemiology and Infection, Vol. 141, No. 8, 2013, p. 1625-1639.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  66. Published

    Comparing antimicrobial exposure based on sales data. / Bondt, Nico; Jensen, Vibeke Frøkjær; Puister-Jansen, Linda F.; van Geijlswijk, Ingeborg M.

    In: Preventive Veterinary Medicine, Vol. 108, No. 1, 2013, p. 10-20.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  67. Published
  68. Published

    Comparison of typing by whole genome sequencing (WGS) and pulsed field gel electrophoresis (PFGE) of isolates from a hospital outbreak with a CTX-M-15 producing Klebsiella pneumoniae. / Hansen, D. S.; Kaas, Rolf Sommer; Nielsen, E. M.; Aarestrup, Frank Møller; Hasman, Henrik.

    10th International Meeting on Microbial Epidemiological Markers (IMMEM-10) - Abstract Book. Paris, France, 2013. p. 154.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  69. Published

    DANMAP 2012 : DANMAP 2012 - Use of antimicrobial agents and occurrence of antimicrobial resistance in bacteria from food animals, food and humans in Denmark . / Agersø, Yvonne; Dalhoff Andersen, Vibe; Helwigh, Birgitte; Borck Høg, Birgitte; Jensen, Lars Bogø; Jensen, Vibeke Frøkjær; Korsgaard, Helle; Larsen, Lars Stehr; Pedersen, Karl; Seyfarth, Anne Mette; Dalby, Tine; Hammerum, Anette M.; Hoffmann, Steen; Gaardbo Kuhn, Katrin; Larsen, Anders Rhod; Laursen, Maja; Møller Nielsen, Eva ; Olsen, Stefan S.; Petersen, Andreas; Skjøt-Rasmussen, Line; Skov, Robert L.; Slotved, Hans-Christian; Torpdahl, Mia.

    DANMAP, 2013. 118 p. (Dansk Veterinærtidsskrift).

    Publication: ResearchReport – Annual report year: 2013

  70. Published

    Detection of a Shiga toxin- and extended-spectrum-β-lactamase-producing Escherichia coli O157:H7 human clinical isolate. / Torpdahl, Mia; Nielsen, Eva M.; Scheutz, Flemming; Olesen, Bente; Hansen, Dennis S.; Hasman, Henrik.

    In: Journal of Antimicrobial Chemotherapy, Vol. 68, No. 5, 2013, p. 1203-1204.

    Publication: Research - peer-reviewLetter – Annual report year: 2013

  71. Published
  72. Published
  73. Published

    Dissemination of clonal Salmonella enterica serovar Typhimurium isolates causing salmonellosis in Mauritius. / Issack, M. I.; Migura, Lourdes Garcia; Ramsamy, Veemala D.; Svendsen, Christina Aaby; Pornruangwong, Srirat ; Pulsrikarn, Chaiwat ; Hendriksen, Rene S.

    In: Foodborne Pathogens and Disease, Vol. 10, No. 7, 2013, p. 618-623.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  74. Published

    Effects of decontamination at varying contamination levels of Campylobacter jejuni on broiler meat. / Boysen, Louise; Wechter, Naja Strandby; Rosenquist, Hanne.

    In: Poultry Science, Vol. 92, No. 5, 2013, p. 1425-1429.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  75. Published

    EFSA BIOHAZ Panel (EFSA Panel on Biological Hazards), 2013. Scientific Opinion on the public health hazards to be covered by inspection of meat (bovine animals).. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2013. 261 p. (The EFSA Journal; No. 3266, Vol. 11(6)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2013

  76. Published

    EFSA BIOHAZ Panel (EFSA Panel on Biological Hazards), 2013. Scientific Opinion on the public health hazards to be covered by inspection of meat from farmed game. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2013. 181 p. (The EFSA Journal; No. 3264, Vol. 11(6)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2013

  77. Published

    EFSA BIOHAZ Panel (EFSA Panel on Biological Hazards, 2013. Scientific Opinion on the public health hazards to be covered by inspection of meat from sheep and goats.. / EFSA publication.

    Palma, Italy : European Food Safety Authority, 2013. 186 p. (The EFSA Journal; No. 3265, Vol. 11(6)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2013

  78. Published

    EFSA BIOHAZ Panel (EFSA Panel on Biologicial Hazards), 2013. Scientific Opinion on the public health hazards to be covered by inspection of meat (solipeds). / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2013. 161 p. (The EFSA Journal; No. 3263, Vol. 11(6)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2013

  79. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on the public health risks related to mechanically separated meat (MSM) derived from poultry and swine. / EFSA Publication.

    Parma, Italy : European Food Safety Authority, 2013. 78 p. (The EFSA Journal; No. 3137, Vol. 11(3)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2013

  80. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on the risk of transmission of classical scrapie via in vivo derived embryo transfer in ovine animals. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2013. 15 p. (The EFSA Journal; No. 3080, Vol. 11(2)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2013

  81. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on VTEC-seropathotype and scientific criteria regarding pathogenicity assessment. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2013. 106 p. (The EFSA Journal; No. 3138, Vol. 11(4)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2013

  82. Published

    Escherichia coli as indicator of the human Salmonella risk caused by consumption of pork. / Bollerslev, Anne Mette; Nauta, Maarten; Hald, Tine; Hansen, Tina Beck; Aabo, Søren.

    Salmonelle and Salmonellosis: Abstract book. ed. / Pierre Colin; Genevieve Clement. Saint-Malo, France, 2013. p. 354-356 36687943.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  83. Published

    Establishment of Risk based microbiological criteria in the Nordic countries: A case study on Campylobacter in broiler meat.. / Nauta, Maarten.

    National Food Institute, Technical University of Denmark, 2013. 87 p.

    Publication: ResearchReport – Annual report year: 2013

  84. Published

    Estimating the true incidence of campylobacteriosis and salmonellosis in the European Union, 2009. / Havelaar, A. H.; Ivarsson, S.; Lofdahl, M.; Nauta, Maarten.

    In: Epidemiology and Infection, Vol. 141, No. 2, 2013, p. 293-302.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  85. Published

    Evaluation of pre-PCR processing approaches for enumeration of Salmonella enterica in naturally contaminated animal feed. / Löfström, Charlotta; Schelin, J.; Andersson, G.; Vigre, Håkan; Norling, B.; Häggblom, P.; Hoorfar, Jeffrey; Rådström, P.

    2013. Poster session presented at MedVetNet Association International Scientific Conference 2013, Lyngby, Denmark.

    Publication: Research - peer-reviewPoster – Annual report year: 2013

  86. Published

    Evaluation of pre-PCR processing approaches for enumeration of Salmonella enterica in naturally contaminated animal feed. / Löfström, Charlotta; Schelin, Jenny; Anderson, Gunnar; Vigre, Håkan; Norling, Börje; Häggblom, Per; Hoorfar, Jeffrey; Rådström, Peter.

    Med-Vet-Net Association International Scientific Conference DTU, Lyngby, Denmark, 24-25 June 2013: Abstract Book. Lyngby, 2013. p. 29.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  87. Published

    External quality assurance system (EQAS) for identification of mastitis pathogens in Denmark from 2006 to 2011. / Karlsmose, Susanne; Kunstmann, L.; Rundsten, Carsten Friis; Krogh, K.; Larsen, H.K.D.; Jensen, Arne Bent; Aarestrup, Frank Møller; Hendriksen, Rene S.

    In: Preventive Veterinary Medicine, Vol. 109, No. 3-4, 2013, p. 271-277.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  88. Published

    Extremely Drug-Resistant Salmonella enterica Serovar Senftenberg Infections in Patients in Zambia.. / Hendriksen, Rene S.; Joensen, Katrine Grimstrup; Lukwesa-Musyani, Chileshe; Kalondaa, Annie; Leekitcharoenphon, Pimlapas; Nakazwe, Ruth; Aarestrup, Frank Møller; Hasman, Henrik; Mwansa, James C L.

    In: Journal of Clinical Microbiology, Vol. 51, No. 1, 2013, p. 284-286.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  89. Published

    Genome sequencing - the ultimate answer to global real time genotyping and surveillance?. / Hendriksen, Rene S.

    10th International Meeting on Microbial Epidemiological Markers (IMMEM-10) - Abstract Book. Paris, France, 2013. p. 43.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  90. Published
  91. Published
  92. Published

    Human risk from thermotolerant Campylobacter on broiler meat in Denmark. / Boysen, Louise; Nauta, Maarten; Ribeiro Duarte, Ana Sofia; Rosenquist, Hanne.

    In: International Journal of Food Microbiology, Vol. 162, No. 2, 2013, p. 129-134.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  93. Published

    In silico and in vitro evaluation of PCR-based assays for the detection of Bacillus anthracis chromosomal signature sequences. / Ågren, Joakim; Hamidjaja, Raditijo A.; Hansen, Trine; Ruuls, Robin; Thierry, Simon; Vigre, Håkan; Janse, Ingmar; Sundström, Anders; Segerman, Bo; Koene, Miriam; Löfström, Charlotta; Van Rotterdam, Bart ; Derzelle, Sylviane.

    In: Virulence, Vol. 4, No. 8, 2013, p. 1-15.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  94. Published

    Integration of Epidemiological Evidence in a Decision Support Model for the Control of Campylobacter in Poultry Production. / Garcia Clavero, Ana Belén; Madsen, Anders L.; Vigre, Håkan.

    In: Agriculture, Vol. 3, No. 3, 2013, p. 516-535.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  95. Published

    Livestock Origin for a Human Pandemic Clone of Community-Associated Methicillin-Resistant Staphylococcus aureus. / Spoor, Laura E.; McAdam, Paul R.; Weinert, Lucy A.; Rambaut, Andrew; Hasman, Henrik; Aarestrup, Frank Møller; Kearns, Angela M.; Larsen, Anders R.; Skov, Robert L.; Fitzgerald, J. Ross.

    In: mBio, Vol. 4, No. 4, e00356-13, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  96. Published

    Making sense of zeros: impact on human health risk estimates. / Ribeiro Duarte, Ana Sofia; Stockmarr, Anders; Nauta, Maarten.

    Med-Vet-Net Association International Scientific Conference DTU, Lyngby, Denmark, 24-25 June 2013: Abstract Book. Lyngby, 2013. p. 55.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  97. Published

    Method development in risk-benefit assessment and burden of disease estimation of food. / Berjia, Firew Lemma; Nauta, Maarten (Supervisor); Poulsen, Morten (Supervisor); Andersen, Rikke (Supervisor).

    Søborg : National Food Institute, Technical University of Denmark, 2013. 154 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2014

  98. Published
  99. Published

    Molecular diagnostics of foodborne pathogens. / Hansen, Trine; Hoorfar, Jeffrey (Main supervisor); Löfström, Charlotta (Supervisor); Vigre, Håkan (Supervisor); Riber, Leise (Supervisor).

    Søborg : National Food Institute, Technical University of Denmark, 2013. 194 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2013

  100. Published

    Occurence and control of viruses in food handling environments and in ready-to-eat foods. / Porsbo, Lone Jannok; Jensen, Tenna; Noerrung, Birgit.

    Food Borne Viruses and Prions and Their Significance for Public Health. ed. / Frans J. M. Smulders; Birgit Nørrung; Herbert Budka. Woodhead Publishing, 2013. p. 181-200 (Food Safety Assurance and Veterinary Public Health; No. 6).

    Publication: Research - peer-reviewBook chapter – Annual report year: 2013

  101. Published

    Occurrence of Listeria spp. in retail meat and dairy products in the area of Addis Ababa, Ethiopia.. / Derra, F. A.; Karlsmose, Susanne; Monga, D. P.; Mache, A.; Svendsen, Christina Aaby; Felix, B.; Granier, S. A.; Geyid, A.; Taye, G.; Hendriksen, Rene S.

    In: Foodborne Pathogens and Disease, Vol. 10, No. 6, 2013, p. 577-579.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  102. Published

    Occurrence of Salmonella in retail beef and related meat products in Zaria, Nigeria. / Tafida, S.Y.; Kabir, J.; Kwaga, J.K.P.; Bello, M.; Umoh, V.J.; Yakubu, S.E.; Nok, A.J.; Hendriksen, Rene S.

    In: Food Control, Vol. 32, No. 1, 2013, p. 119-124.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  103. Published

    Organic acids for control of Salmonella in different feed materials. / Koyuncu, Sevinc; Andersson, Mats Gunnar; Löfström, Charlotta; Skandamis, Panagiotis N.; Gounadaki, Antonia; Zentek, Jürgen; Häggblom, Per .

    In: B M C Veterinary Research, Vol. 9, 81, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  104. Published

    PathogenFinder - Distinguishing Friend from Foe Using Bacterial Whole Genome Sequence Data.. / Cosentino, Salvatore; Larsen, Mette Voldby; Aarestrup, Frank Møller; Lund, Ole.

    In: PloS one., Vol. 8, No. 10, 2013, p. e77302.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  105. Published

    Pathogen update: Salmonella. / Hald, Tine.

    Advances in Microbial Food Safety. ed. / J. Sofos. Vol. 1 Cambridge : Woodhead Publishing, 2013.

    Publication: Research - peer-reviewBook chapter – Annual report year: 2013

  106. Published

    Pathogen updates: Salmonella. / Hald, Tine.

    Foodborne Infections and Intoxications. ed. / G. Morris; M. Potter. 4. ed. Academic Press, Incorporated, 2013. p. 67-97.

    Publication: Research - peer-reviewBook chapter – Annual report year: 2013

  107. Published

    Practical considerations on surveillance of Salmonella serovars other than Enteritidis and Typhimurium. / Wagenaar, J. A.; Hendriksen, Rene S.; Carrigue-Mas, J.

    In: O I E Revue Scientifique et Technique, Vol. 32, No. 2, 2013, p. 509-519.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  108. Published
  109. Published

    Promoting prudent antimicrobial use in the veterinary field. / Jensen, Vibeke Frøkjær.

    In: Veterinary Record, Vol. 173, No. 19, 2013, p. 473-474.

    Publication: Research - peer-reviewEditorial – Annual report year: 2013

  110. Published

    Public Health Risks of Enterobacterial Isolates Producing Extended-Spectrum β-Lactamases or AmpC β-Lactamases in Food and Food-Producing Animals: An EU Perspective of Epidemiology, Analytical Methods, Risk Factors, and Control Options. / Liebana, Ernesto; Carattoli, Alessandra; Coque, Teresa M.; Hasman, Henrik; Magiorakos, Anna-Pelagia; Mevius, Dik; Peixe, Luisa; Poirel, Laurent; Schuepbach-Regula, Gertraud; Torneke, Karolina; Torren-Edo, Jordi; Torres, Carmen; Threlfall, John.

    In: Clinical Infectious Diseases, Vol. 56, No. 7, 2013, p. 1030-1037.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  111. Published

    Real-Time WGS-based Typing of VTEC Isolates for Surveillance and Outbreak Detection. / Joensen, Katrine Grimstrup; Hasman, Henrik; Scheutz, F.; Nielsen, E. M.; Lund, Ole; Aarestrup, Frank Møller.

    10th International Meeting on Microbial Epidemiological Markers (IMMEM-10) - Abstract Book. Paris, France, 2013. p. 209.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  112. Published

    Regarding “The Economic Efficiency of Sampling Size: The Case of Beef Trim”. / Powell, Mark R.; Nauta, Maarten; Schaffner, Don; Zwietering, Marcel.

    In: Risk Analysis, Vol. 33, No. 3, 2013, p. 350-352.

    Publication: ResearchLetter – Annual report year: 2013

  113. Published
  114. Published

    Resistance in bacteria of the food chain: epidemiology and control strategies. / Cavaco, Lina; Aarestrup, Frank Møller.

    Microbial Drug Resistance. Future Medicine Ltd, 2013. p. 134-156.

    Publication: Research - peer-reviewBook chapter – Annual report year: 2013

  115. Published

    Ringtest för identificering och resistensbestämning av mastitpatogener. / Karlsmose, Susanne; Hendriksen, Rene S.; Dahl Larsen, Heidi Kristina.

    In: Svensk Veterinaertidning, No. 8-9, 2013, p. 15-17.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  116. Published

    Risk-Based Microbiological Criteria: A Tool To Control Campylobacter. / Nauta, Maarten; Andersen, Jens Kirk.

    CHRO 2013: 17th International Workshop on Campylobacter, Helicobacter and Related Organisms. United Kingdom : University of Aberdeen, 2013. p. 23.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  117. Published

    Risk factors for the occurrence of extended-spectrum cephalosporinase producing E. coli in pig herds. / Dalhoff Andersen, Vibe; Jensen, Vibeke Frøkjær; Vigre, Håkan; Andreasen, Margit; Agersø, Yvonne.

    Med-Vet-Net Association International Scientific Conference DTU, Lyngby, Denmark, 24-25 June 2013: Abstract Book. Lyngby, 2013. p. 48.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  118. Published

    Source attribution of human salmonellosis in low-prevalence countries: a Northern European model. / Pires, Sara Monteiro; de Knegt, Leonardo; Rosendal, Thomas; Ranta, Jukka; Urdahl, Anne Margrete; Tafjord Heier, Berit; Lahti, Elina; Wahlström, Helene.

    Med-Vet-Net Association International Scientific Conference DTU, Lyngby, Denmark, 24-25 June 2013: Abstract Book. Lyngby, 2013. p. 53.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  119. Published

    Staphylococcus aureus CC398: Host Adaptation and Emergence of Methicillin Resistance in Livestock. / Price, Lance B.; Stegger, Marc; Hasman, Henrik; Aziz, Maliha; Larsen, Jesper; Andersen, Paal Skytt; Pearson, Talima; Waters, Andrew E.; Foster, Jeffrey T.; Schupp, James; Gillece, John; Driebe, Elizabeth; Liu, Cindy M.; Springer, Burkhard; Zdovc, Irena; Battisti, Antonio; Franco, Alessia; Żmudzki, Jacek; Schwarz, Stefan; Butaye, Patrick; Jouy, Eric; Pomba, Constanca; Porrero, M. Concepción; Ruimy, Raymond; Smith, Tara C.; Robinson, D. Ashley; Weese, J. Scott; Arriola, Carmen Sofia; Yu, Fangyou; Laurent, Frederic; Keim, Paul; Skov, Robert; Aarestrup, Frank Møller.

    In: mBio, Vol. 4, No. 1, 20e00520-12, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  120. Published

    The 12th EURL-AR Proficiency Test - enterococci, staphylococci and E. coli 2012. / Cavaco, Lina; Karlsmose, Susanne; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    Søborg : National Food Institute, Technical University of Denmark, 2013. 23 p.

    Publication: ResearchReport – Annual report year: 2013

  121. Published

    The 13th EURL-AR Proficiency Testing Salmonella, Campylobacter and genotypic characterization 2012. / Karlsmose, Susanne; Cavaco, Lina; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    Søborg : National Food Institute, Technical University of Denmark, 2013. 17 p.

    Publication: ResearchReport – Annual report year: 2013

  122. Published

    The development of probabilistic graphical models to assist on strategic decisions for the control of Campylobacter in poultry. / Garcia Clavero, Ana Belén.

    Med-Vet-Net Association International Scientific Conference DTU, Lyngby, Denmark, 24-25 June 2013: Abstract Book. Lyngby, 2013. p. 20.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2013

  123. Published
  124. Published
  125. Published

    Using next generation sequencing to tackle non-typhoidal Salmonella infections.. / Wain, John; Keddy, Karen H.; Hendriksen, Rene S.; Rubino, Salvatore.

    In: Journal of Infection in Developing Countries, Vol. 7, No. 1, 2013, p. 1-5.

    Publication: Research - peer-reviewReview – Annual report year: 2013

  126. Published

    Veillonella, Firmicutes: Microbes disguised as Gram negatives. / Vesth, Tammi Camilla; Ozen, Asli; Andersen, Sandra Christine; Kaas, Rolf Sommer; Lukjancenko, Oksana; Bohlin, Jon; Nookaew, Intawat; Wassenaar, Trudy M.; Ussery, David.

    In: Standards in Genomic Sciences, Vol. 9, No. 2, 2013, p. 431-448.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  127. Published
  128. Published

    WHO Initiative to Estimate the Global Burden of Foodborne Diseases. / Havelaar, Arie H.; Cawthorne, Amy; Angulo, Fred; Bellinger, David; Corrigan, Tim; Cravioto, Alejandro; Gibb, Herman; Hald, Tine; Ehiri, John; Kirk, Maryn; Lake, Rob; Praet, Nicolas; Speybroeck, Niko; de Silva, Nilanthi; Stein, Claudia; Torgerson, Paul; Kuchenmüller, Tanja.

    In: Lancet, Vol. 381, No. Supplement 2, 2013, p. S59.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2013

  129. 2012
  130. Published

    Acid stress response and protein induction in Campylobacter jejuni isolates with different acid tolerance.. / Birk, Tina; Wik, Monica Takamiya; Lametsch, René; Knøchel, Susanne.

    In: B M C Microbiology, Vol. 12, No. 174, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  131. Published

    Alkalilactibacillus ikkensis, gen. nov., sp. nov., a novel enzyme-producing bacterium from a cold and alkaline environment in Greenland. / Schmidt, Mariane; Priemé, Anders; Johansen, Anders; Stougaard, Peter .

    In: Extremophiles, Vol. 16, 2012, p. 297-305.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  132. Published

    Annual Report on Zoonoses in Denmark 2011. / Helwigh, Birgitte (Editor); Müller, Luise (Editor).

    Søborg : DTU Food, 2012. 65 p.

    Publication: Research - peer-reviewReport – Annual report year: 2012

  133. Published

    Antibiotikavejledning til familedyr. / Spohr, A.; Schjøth, B.; Wiinberg, B.; Houser, G.; Willesen, J.; Rem Jessen, L.; Guardabassi, L.; Schjærff, M.; Eriksen, T.; Jensen, Vibeke Frøkjær.

    København Ø : Sektion vedr. Hund, Kat og Smådyr, SvHKS, 2012. 113 p.

    Publication: ResearchBook – Annual report year: 2012

  134. Published

    Antimicrobial resistance in Salmonella spp. recovered from patients admitted to six different hospitals in Tehran, Iran from 2007 to 2008. / Tajbakhsh, Mercedeh ; Hendriksen, Rene S.; Nochi, Zahra ; Zali, Mohammad Reza ; Aarestrup, Frank Møller; Garcia-Migura, L. .

    In: Folia Microbiologica, Vol. 57, 2012, p. 91–97.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  135. Published

    A proactive attempt to control an outbreak of foodborne disease in humans after detection of Salmonella during surveillance and control of pork in Denmark. / Wingstrand, Anne; Jensen, T.; Sørensen, Gitte; Gubbels, S. ; Porsbo, Lone Jannok; Ethelberg, S.; Bjerager, G. O. ; Kjeldsen, Marianne Kirstine; Torpdahl, M.; Kuhn, K. G.

    Case studies in food safety and authenticity: Lessons from real-life situations. ed. / J. Hoorfar. Woodhead Publishing, 2012. (Woodhead Publishing Series in Food Science, Technology and Nutrition, Vol. 240).

    Publication: Research - peer-reviewBook chapter – Annual report year: 2012

  136. Published
  137. Published
  138. Published

    Bedste resultat af ringtesten nogensinde. / Hendriksen, Rene S.; Kunstmann, Lars; Dyring Jensen, Jacob; Cavaco, Lina; Jensen, Arne Bent; Dahl, Heidi Kristina; Aarestrup, Frank Møller.

    In: Dyrlægen, Vol. 5, No. 4, 2012, p. 8-13.

    Publication: ResearchJournal article – Annual report year: 2012

  139. Published

    Campylobacter i Danmark - bekæmpelse, human risiko og smittekilder. / Boysen, Louise.

    In: Miljø og Sundhed, Vol. 18, No. 3, 2012, p. 4-8.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  140. Published

    Campylobacter in Denmark : control, human risk and source attribution. / Boysen, Louise; Rosenquist, Hanne (Supervisor); Hald, Tine (Supervisor); Ethelberg, Steen (Supervisor).

    Søborg : DTU Food, 2012. 79 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2012

  141. Published

    Characterization of CTX-M-14- and CTX-M-15-producing Escherichia coli of porcine origin. / Hammerum, Anette M.; Jakobsen, Lotte; Olsen, Stefan S.; Agersø, Yvonne.

    In: Journal of Antimicrobial Chemotherapy, Vol. 67, No. 8, 2012, p. 2047-2049.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  142. Published

    Characterization of Salmonella enterica serovar Enteritidis isolates recovered from blood and stool specimens in Thailand. / Hendriksen, Rene S.; Hyytia-Trees, Eija; Pulsrikarn, Chaiwat; Pornruangwong, Srirat; Chaichana, Phattharaporn; Svendsen, Christina Aaby; Ahmed, Rafiq; Mikoleit, Matthew.

    In: B M C Microbiology, Vol. 12, No. 92, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  143. Published

    Comparison between Livestock and Community associated MRSA in Europe. / Cavaco, Lina; Miragaia, M.; Rolo, J.; Conceicao, T.; Hasman, Henrik; Aarestrup, Frank Møller; de Lencastre, H.

    2012. Poster session presented at 3rd ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens in Animals, Humans and the Environment, Aix-en-Provence, France.

    Publication: Research - peer-reviewPoster – Annual report year: 2012

  144. Published
  145. Published

    DANMAP 2011 : DANMAP 2011 - Use of antimicrobial agents and occurrence of antimicrobial resistance in bacteria from food animals, food and humans in Denmark . / Agersø, Yvonne; Hald, Tine; Helwigh, Birgitte; Borck Høg, Birgitte; Jensen, Lars Bogø; Jensen, Vibeke Frøkjær; Korsgaard, Helle; Larsen, Lars Stehr; Seyfarth, Anne Mette; Struve, Tina; Hammerum, A. M.; Kuhn, K. G.; Lambertsen, L. M.; Larsen, A. R.; Laursen, M.; Nielsen, E. M.; Olsen, S. S.; Petersen, A.; Skjøt-Rasmussen, L.; Skov, R. L.; Torpdahl, M.

    DANMAP, 2012. 138 p. (Dansk Veterinærtidsskrift).

    Publication: ResearchReport – Annual report year: 2012

  146. Published
  147. Published

    Development of a Salmonella source-attribution model for evaluating targets in the turkey meat production. : Supporting Publications 2012:EN-259. / Hald, Tine; Pires, Sara Monteiro; de Knegt, Leonardo.

    Mørkhøj, Denmark : European Food Safety Authority, 2012. 35 p.

    Publication: Research - peer-reviewReport – Annual report year: 2012

  148. Published

    Development of a user-friendly interface version of the Salmonella source-attribution model. / Hald, Tine; Lund, Jan.

    Søborg : The National Food Institute, Technical University of Denmark, 2012. 73 p.

    Publication: Research - peer-reviewReport – Annual report year: 2013

  149. Published

    Diagnostic herd sensitivity using environmental samples. / Vigre, Håkan; Josefsen, Mathilde Hartmann; Seyfarth, Anne Mette; Agersø, Yvonne.

    2012. Abstract from 13th International Symposium on Veterinary Epidemiology and Economics, Maastricht, Netherlands.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2012

  150. Published

    Draft Genome Sequence of the Yeast Pachysolen tannophilus CBS 4044/NRRL Y-2460. / Liu, Xiaoying ; Kaas, Rolf Sommer; Jensen, Peter Ruhdal; Workman, Mhairi.

    In: Eukaryotic Cell (Online Edition), Vol. 11, No. 6, 2012, p. 827.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  151. Published
  152. Published

    EFSA Panel on Biological Hazards (BIOHAZ) and EFSA Panel on Contaminants in the Food Chain (CONTAM); Scientific Opinion on the minimum hygiene criteria to be applied to clean seawater and on the public health risks and hygiene criteria for bottled seawater intended for domestic use. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 85 p. (The EFSA Journal; No. 2613, Vol. 10(3)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  153. Published

    EFSA Panel on Biological Hazards (BIOHAZ) and Panel on Food Contact Materials, Enzymes, Flavourings and Processing Aids (CEF); Scientific Opinion on the evaluation of the safety and efficacy of Cecure® for the removal of microbial surface contamination of raw poultry products. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 66 p. (The EFSA Journal; No. 2612, Vol. 10(3)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  154. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Norovirus (NoV) in oysters: methods, limits and control options. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 39 p. (The EFSA Journal; No. 2500, Vol. 10(1)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2013

  155. Published

    EFSA Panel on Biological Hazards (BIOHAZ) Panel; Scientific Opinion on the risk posed by pathogens in food of non-animal origin. Part 1 (outbreak data analysis and risk ranking of food/pathogen combinations). / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 138 p. (The EFSA Journal; No. 3025, Vol. 10(1)).

    Publication: Research - peer-reviewReport – Annual report year: 2013

  156. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on an estimation of the public health impact of setting a new target for the reduction of Salmonella in turkeys. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 89 p. (The EFSA Journal; No. 2616, Vol. 10(4)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  157. Published
  158. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on Composting and incineration of dead-on-farm pigs. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 11 p. (The EFSA Journal; No. 2559, Vol. 10(2)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  159. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on on the development of a risk ranking framework on biological hazards. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 88 p. (The EFSA Journal; No. 2724, Vol. 10(6)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  160. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on public health risks represented by certain composite products containing food of animal origin. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 132 p. (The EFSA Journal; No. 2662, Vol. 10(5)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  161. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on Reflecting on the experiences and lessons learnt from modelling on biological hazards. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 44 p. (The EFSA Journal; No. 2725, Vol. 10(6)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  162. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on the „Biomation‟ application for an alternative method for the treatment of animal-by-products. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 12 p. (The EFSA Journal; No. 2614, Vol. 10(3)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  163. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on the evaluation of the safety and efficacy of ListexTM P100 for the removal of Listeria monocytogenes surface contamination of raw fish. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 43 p. (The EFSA Journal; No. 2615, Vol. 10(3)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  164. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on the risk posed by Shiga toxinproducing Escherichia coli (STEC) and other pathogenic bacteria in seeds and sprouted seeds. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 101 p. (The EFSA Journal; No. 2424, Vol. 9(11)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  165. Published

    EFSA Panels on Biological Hazards (BIOHAZ), on Contaminants in the Food Chain (CONTAM), and on Animal Health and Welfare (AHAW); Scientific Opinion on the public health hazards to be covered by inspection of meat (poultry). / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 179 p. (The EFSA Journal; No. 2741, Vol. 10(6)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  166. Published

    EFSA Scientific Committee; Scientific Opinion on Risk Assessment Terminology. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2012. 43 p. (The EFSA Journal; No. 2664, Vol. 10(5)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  167. Published

    Enumeration of Salmonella enterica in naturally contaminated animal feed samples by flotation prior to real-time quantitative PCR. / Schelin, Jenny; Norling, Börje; Vigre, Håkan; Rådström, Peter; Löfström, Charlotta.

    2012. Poster session presented at 23rd International ICFMH Symposium, FoodMicro 2012, Istanbul, Turkey.

    Publication: Research - peer-reviewPoster – Annual report year: 2012

  168. Published

    Enumeration of Salmonella enterica in naturally contaminated animal feed samples by flotation prior to real-time quantitative PCR. / Löfström, Charlotta; Schelin, Jenny; Vigre, Håkan; Norling, Börje; Hoorfar, Jeffrey; Rådström, Peter .

    XXIII FoodMicro 2012: Abstract Book. ed. / Dilek Heperkan; Funda Karbancioglu-Guler; Ceren Daskaya-Dikmen. Istanbul : Istanbul Technical University, 2012. p. 260.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2012

  169. Published
  170. Published

    Estimation of the variation that can be attributed to different levels in a clinical trial of a vaccine. / Garcia Clavero, Ana Belén; Bahrndorff, Simon; Hald, Birthe; Madsen, M.; Vigre, Håkan.

    Book of Abstracts of the 13th International Symposium on Veterinary Epidemiology and Economics. Wageningen Academic Publishers, 2012. p. 393.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2012

  171. Published

    Estimation of the variation that can be attributed to different levels in a clinical trial of a vaccine against Campylobacter in broilers. / Garcia Clavero, Ana Belén; Bahrndorff, Simon; Hald, Birthe; Madsen, M.; Vigre, Håkan.

    2012. Poster session presented at 13th International Symposium on Veterinary Epidemiology and Economics, Maastricht, Netherlands.

    Publication: Research - peer-reviewPoster – Annual report year: 2012

  172. Published
  173. Published

    European outbreak of Salmonella Strathcona caused by small tomatoes, August – November 2011. / Müller, Luise ; Kjelsoe, Charlotte; Frank, Christina; Jensen, Tenna ; Torpdahl, Mia; Søborg, Bolette ; Dorleans, Frederique; Wingstrand, Anne; Prager, Rita; Grossner, Celine; Ethelberg, Steen.

    Abstract Book: European Scientific Conference on Applied Infectious Disease Epidemiology. Edinburgh, UK , 2012. p. 52.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2012

  174. Published

    Expansion of a plasmid classification system for Gram-positive bacteria and determination of the diversity of plasmids in Staphylococcus aureus strains of human, animal, and food origins.. / Lozano, C.; Garcia-Migura, L.; Aspiroz, C.; Zarazaga, M.; Torres, C.; Aarestrup, Frank Møller.

    In: Applied and Environmental Microbiology, Vol. 78, No. 16, 2012, p. 5948-5955.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  175. Published

    Expansion of the IncX plasmid family for improved identification and typing of novel plasmids in drug-resistant Enterobacteriaceae. / Johnson, Timothy J.; Bielak, Eliza Maria; Fortini, Daniela; Hansen, Lars Hestbjerg; Hasman, Henrik; Debroy, Chitrita; Nolan, Lisa K; Carattoli, Alessandra.

    In: Plasmid, Vol. 68, No. 1, 2012, p. 43-50.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  176. Published

    Fitting a distribution to miccrobial counts: making sense of zeros. / Ribeiro Duarte, Ana Sofia; Stockmarr, Anders; Nauta, Maarten.

    2012. Abstract from 23rd International ICFMH Symposium, FoodMicro 2012, Istanbul, Turkey.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2013

  177. Published
  178. Published
  179. Published

    Identification of Genes Important for Growth of Asymptomatic Bacteriuria Escherichia coli in Urine. / Vejborg, Rebecca Munk; de Evgrafov, Mari Cristina Rodriguez; Phan, Minh Duy; Totsika, Makrina; Schembri, Mark; Hancock, Viktoria .

    In: Infection and Immunity, Vol. 80, No. 9, 2012, p. 3179-3188.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  180. Published

    Integrated approach leads to less Campylobacter.. / Rosenquist, Hanne; Hald, Birthe; Borck Høg, Birgitte; Boysen, Louise.

    In: World Poultry, Vol. 28, No. 5, 2012, p. 11-12.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  181. Published

    Integrating genome-based informatics to modernize global disease monitoring, information sharing, and response.. / Aarestrup, Frank Møller; Brown, Eric W; Detter, Chris; Gerner-Smidt, Peter; Gilmour, Matthew W; Harmsen, Dag; Hendriksen, Rene S.; Hewson, Roger; Heymann, David L; Johansson, Karin; Ijaz, Kashef; Keim, Paul S; Koopmans, Marion; Kroneman, Annelies; Wong, Danilo Lo Fo; Lund, Ole; Palm, Daniel; Sawanpanyalert, Pathom; Sobel, Jeremy; Schlundt, Jørgen.

    In: Emerging Infectious Diseases (Print Edition), Vol. 18, No. 11, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  182. Published

    In vitro susceptibility testing of fluoroquinolone activity against Salmonella: recent changes to CLSI standards.. / Humphries, R. M.; Fang, F. C.; Aarestrup, Frank Møller; Hindler, J. A.

    In: Clinical Infectious Diseases, Vol. 55, No. 8, 2012, p. 1107-1113.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  183. Published

    Mustelidae are natural hosts of Staphylococcus delphini group A. / Guardabassi, Luca; Schmidt, Kristina Runge; Petersen, Tina Steiner; Espinosa-Gongora, Carmen; Moodley, Arshnee; Agersø, Yvonne; Olsen, John Elmerdahl.

    In: Veterinary Microbiology, Vol. 159, No. 3-4, 2012, p. 351-353.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  184. Published

    Population structure of ST398 based on mutation discovery. / Abdelbary, M.; Wittenberg, A.; Cuny, C.; Layer, F.; Wieler, L.; Skov, R.; Larsen, J.; Hasman, Henrik; Fitzgeralde, J. R.; Fitzgeralde, J. R.; Wagenaar, J. A.; Nurnus, U.; Nuebel, U.; Witte, W.

    In: International Journal of Medical Microbiology, Vol. 302, 2012, p. 86-87.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  185. Published

    Quantitative microbiological data analysis of a Campylobacter vaccination trial. / Garcia Clavero, Ana Belén; Bahrndorff, Simon; Hald, Birthe; Madsen, Mogens; Vigre, Håkan.

    2012. Abstract from 13th International Symposium on Veterinary Epidemiology and Economics, Maastricht, Netherlands.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2012

  186. Published

    Questionnaire survey among broiler producers in six European countries. / Borck Høg, Birgitte; Rosenquist, Hanne; Sørensen, Anna Irene Vedel; Larsen, Lars Stehr; Osek, J.; Wieczorek, K.; Kusyk, P.; Cerda-Cuellar, M.; Dolz, R.; Urdaneta, S.; David, B.; Hofshagen, M.; Wagenaar, J. A.; Bolder, N.; Jørgensen, F.; Williams, N.; Merga, Y.; Humphrey, T.

    CAMCON, 2012. 48 p.

    Publication: ResearchReport – Annual report year: 2012

  187. Published
  188. Published

    Ringtesten for identifikation og resistensbestemmelse af mastitispatogener 2012. / Hendriksen, Rene S.; Kunstmann, L.; Jensen, Jacob Dyring; Cavaco, Lina; Jensen, Arne Bent; Dahl Larsen, H. K.; Aarestrup, Frank Møller.

    Kgs. Lyngby : Danmarks Tekniske Universitet, Fødevareinstituttet, 2012. 13 p.

    Publication: Research - peer-reviewReport – Annual report year: 2012

  189. Published

    Risk based microbiological criteria for Campylobacter in broiler meat in the European Union. / Nauta, Maarten; Sanaa, Moez; Havelaar, Arie H.

    In: International Journal of Food Microbiology, Vol. 158, No. 3, 2012, p. 209-217.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  190. Published

    Risk-benefit assessment of cold-smoked salmon: microbial risk versus nutritional benefit. / Berjia, Firew Lemma; Hoekstra, Jeljer; Andersen, Rikke; Poulsen, Morten; Nauta, Maarten.

    In: European Journal of Food Research & Review, Vol. 2, No. 2, 2012, p. 49-68.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  191. Published

    Sammenligning af salmonellaforekomsten i 5 screeninger af danske slagtesvin i perioden 1993 - 2011. / Wingstrand, Anne; Sørensen, Gitte.

    2 ed. Søborg : Danmarks Tekniske Universitet, Fødevareinstituttet, 2012. 36 p.

    Publication: Research - peer-reviewReport – Annual report year: 2012

  192. Published
  193. Published
  194. Published
  195. Published

    Sustainable farming : Get pigs off antibiotics. / Aarestrup, Frank Møller.

    In: Nature, Vol. 486, No. 7404, 2012, p. 465-466.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  196. Published
  197. Published
  198. Published

    The 11th EURL-AR Proficiency Testing Salmonella and Campylobacter 2011.. / Karlsmose, Susanne; Cavaco, Lina; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    The National Food Institute, Technical University of Denmark, 2012. 76 p.

    Publication: Research - peer-reviewReport – Annual report year: 2012

  199. Published

    The effect of cephalosporin usage on the occurrence of ESCs producing E. coli in pig herds. / Dalhoff Andersen, Vibe; Jensen, Vibeke Frøkjær; Agersø, Yvonne; Vigre, Håkan.

    2012. Abstract from 13th International Symposium on Veterinary Epidemiology and Economics, Maastricht, Netherlands.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2012

  200. Published

    The effect of enrofloxacin use in calves on the selection of plasmid mediated quinolone resistance in Commensal E. coli. / Guerreiro, L.; Couto, N.; Centeno, M.; Nunes, T.; Cavaco, Lina; Pomba, C.

    2012. Poster session presented at 3rd ASM Conference on Antimicrobial Resistance in Zoonotic Bacteria and Foodborne Pathogens in Animals, Humans and the Environment, Aix-en-Provence, France.

    Publication: Research - peer-reviewPoster – Annual report year: 2012

  201. Published
  202. Published

    The External Quality Assurance System of the WHO Global Foodborne Infections Network: Year 2010.. / Hendriksen, Rene S.; Karlsmose, Susanne; Jensen, Arne Bent; Aarestrup, Frank Møller.

    The National Food Institute, Technical University of Denmark, 2012.

    Publication: Research - peer-reviewReport – Annual report year: 2012

  203. Published

    The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium. / Kröger, Carsten; Dillon, Shane C.; Cameron, Andrew D. S.; Papenfort, Kai; Sivasankaran, Sathesh K.; Hokamp, Karsten; Chao, Yanjie; Sittka, Alexandra; Hébrard, Magali; Händler, Kristian; Colgan, Aoife; Leekitcharoenphon, Pimlapas; Langridge, Gemma C.; Lohan, Amanda J.; Loftus, Brendan; Lucchini, Sacha; Ussery, David; Dorman, Charles J.; Thomson, Nicholas R.; Vogel, Jörg; Hinton, Jay C. D.

    In: National Academy of Sciences. Proceedings, Vol. 109, No. 20, 2012, p. E1277-E1286.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  204. Published
  205. Published

    The use of probabilistic graphical models (PGMs) to develop a cost-effective vaccination strategy against Campylobacter in poultry. / Garcia Clavero, Ana Belén; Madsen, A.; Vigre, Håkan.

    2012. Abstract from 13th International Symposium on Veterinary Epidemiology and Economics, Maastricht, Netherlands.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2012

  206. Published

    Tools for Microbiological risk assessment. / Bassett, john; Nauta, Maarten; Lindqvist, Roland; Zwietering, Marcel.

    ILSI Europe, 2012. 40 p. (ILSI Europe Report Series).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  207. Published

    Trends and sources in human campylobacteriosis. / Boysen, Louise.

    Annual Report on Zoonoses in Denmark 2011. ed. / Birgitte Helwigh. Søborg : DTU Food, 2012. p. 10-11.

    Publication: ResearchBook chapter – Annual report year: 2012

  208. Published

    Vurdering fra DTU Fødevareinstituttet: Mikrobiologiske risici ved frugt og grønt. / Baggesen, Dorte Lau; Jensen, Annette Nygaard; Andersen, Jens Kirk; Boel, Jeppe; Wingstrand, Anne; Hald, Tine.

    Danmarks Tekniske Universitet, Fødevareinstituttet, 2012. 92 p.

    Publication: CommissionedReport – Annual report year: 2012

  209. 2011
  210. Published

    Analysis of the baseline survey on the prevalence of Campylobacter in broiler batches and of Campylobacter and Salmonella on broiler carcasses, in the EU, 2008. Part B: Analysis of factors associated with Salmonella contamination of broiler carcasses. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2011. 85 p. (The EFSA Journal; No. 2017, Vol. 9(2)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  211. Published

    Annual Report on Zoonoses in Denmark 2010. / Helwigh, Birgitte; Krogh, Anne Louise; Müller, Luise.

    Søborg : National Food Institute, Technical University of Denmark, 2011. 60 p.

    Publication: ResearchReport – Annual report year: 2011

  212. Published

    Chapter 4. Antimicrobial consumption in animals. / Jensen, Vibeke Frøkjær; Dalhoff Andersen, Vibe.

    DANMAP 2010 - Use of antimicrobial agents and occurrence of antimicrobial resistance in bacteria from food animals, food and humans in Denmark. DANMAP, 2011. p. 24-40.

    Publication: ResearchReport chapter – Annual report year: 2012

  213. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on a quantitative estimation of the public health impact of setting a new target for the reduction of Salmonella in broilers. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2011. 94 p. (The EFSA Journal; No. 2106, Vol. 9(7)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2011

  214. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on Composting on-farm of dead poultry. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2011. 11 p. (The EFSA Journal; No. 2427, Vol. 9(11)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  215. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on On-site treatment of pig carcasses. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2011. 11 p. (The EFSA Journal; No. 2425, Vol. 9(11)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  216. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on Scientific Opinion on risk based control of biogenic amine formation in fermented foods. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2011. 93 p. (The EFSA Journal; No. 2393, Vol. 9(11)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  217. Published

    EFSA Panel on Biological Hazards (BIOHAZ); Scientific Opinion on the maintenance of the list of QPS biological agents intentionally added to food and feed (2011 update). / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2011. 82 p. (The EFSA Journal; No. 2497, Vol. 9(12)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  218. Published

    EFSA Panels on Biological Hazards (BIOHAZ), on Contaminants in the Food Chain (CONTAM), and on Animal Health and Welfare (AHAW); Scientific Opinion on the public health hazards to be covered by inspection of meat (swine).. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2011. 198 p. (The EFSA Journal; No. 2351, Vol. 9(10)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2011

  219. Published

    Estimation of the relative contribution of different food and animal sources to human Salmonella infections in the European Union. / Pires, Sara Monteiro; de Knegt, Leonardo; Hald, Tine.

    Søborg, Denmark : National Food Institute, Technical University of Denmark, 2011. 80 p.

    Publication: ResearchReport – Annual report year: 2012

  220. Published

    European Food Safety Authority; Analysis of the baseline survey of Salmonella in holdings with breeding pigs, in the EU, 2008; Part B: Analysis of factors potentially associated with Salmonella pen positivity. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2011. 159 p. (The EFSA Journal; No. 2329, Vol. 9(7)).

    Publication: Research - peer-reviewReport – Annual report year: 2012

  221. Published

    Optimal interventions to control campylobacter in broilers in Denmark. / Rosenquist, Hanne; Sommer, Helle Mølgaard; Bodil Hald, Anna; Lassen, Jesper; Korzen, Sara Marie; Lund, Mogens; Lawson, Lartey Godwin; Jensen, Jørgen Dejgård; Christensen, T.; Mørkbak, Morten Raun; Sandøe, Peter.

    2011. Poster session presented at 16th International Workshop on Campylobacter, Helicobacter, and Related Organisms, Vancouver, Canada.

    Publication: Research - peer-reviewPoster – Annual report year: 2011

  222. Published
  223. 2010
  224. Published

    Analysis of the baseline survey on the prevalence of Campylobacter in broiler batches and of Campylobacter and Salmonella on broiler carcasses in the EU, 2008, Part A: Campylobacter and Salmonella prevalence estimates. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2010. 100 p. (The EFSA Journal; No. 1503, Vol. 8(03)).

    Publication: Research - peer-reviewReport – Annual report year: 2010

  225. Published

    Annual Report on Zoonoses in Denmark 2009. / Helwigh, Birgitte; Krogh, Anne Louise; Ethelberg, Steen.

    National Food Institute, Technical University of Denmark, 2010. 60 p.

    Publication: ResearchReport – Annual report year: 2010

  226. Published

    EFSA Panel on Biological Hazards; Scientific Opinion on a Quantitative Microbiological Risk Assessment of Salmonella in slaughter and breeder pigs. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2010. 90 p. (The EFSA Journal; No. 1547, Vol. 8(4)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2010

  227. Published

    Quantitative Microbiological Risk Assessment on Salmonella in Slaughter and Breeder pigs: Final Report. / Vigre, Håkan; Coutinho Calado Domingues, Ana Rita; Barfod, Kirsten ; Pedersen, Ulrik Bo; Wingstrand, Anne; Hald, Tine.

    Veterinary Laboratories Agency, 2010. 437 p.

    Publication: Research - peer-reviewReport – Annual report year: 2010

  228. 2009
  229. Published
  230. Published

    Annual Report on Zoonoses in Denmark 2008. / Helwigh, Birgitte; Krogh, Anne Louise; Ethelberg, Steen.

    National Food Institute, Technical University of Denmark, 2009. 56 p.

    Publication: ResearchReport – Annual report year: 2009

  231. Published

    De danske systemer til overvågning og kontrol af salmonella : Et kritisk eftersyn. / Mølbak, Kåre; Rønne, Tove; Dahl, Jan; Møgelmose, Vibeke; Nielsen Blom, Mie; Rosenbaum Nielsen, Liza; Baggesen, Dorte Lau; Hald, Tine; Madsen, Mogens; Sandø, Gudrun; Breck, Karin; Mousing, Jan.

    1 ed. Fødevarestyrelsen, 2009. 123 p.

    Publication: ResearchReport – Annual report year: 2009

  232. Published

    Notat: Sammenligning af salmonellaforekomst i frilandssvin, økologiske svin og konventionelle svin : Qyalysafe 080109. / Wingstrand, Anne; Sørensen, Anna Irene Vedel; Barfod, Kristen.

    Søborg : Danmarks Tekniske Universitet, Fødevareinstituttet, 2009. 3 p.

    Publication: CommissionedReport – Annual report year: 2009

  233. Published

    The effect of production type and antimicrobial usage on the occurrence of tetracycline resistant E. coli in danish slaughter pig farms. / Struve, Tina; Vigre, Håkan; Wingstrand, Anne; Sørensen, Anna Irene Vedel; Lundsby, Katrine Løvenbalk; Emborg, Hanne-Dorthe.

    2009. Poster session presented at 12th Symposium of the International Society for Veterinary Epidemiology and Economics , Durban, South Africa.

    Publication: Research - peer-reviewPoster – Annual report year: 2009

  234. Published

    The effect of production type and antimicrobial usage on the occurrence of tetracycline resistant E. coli in danish slaughter pig farms. / Struve, Tina; Vigre, Håkan; Wingstrand, Anne; Sørensen, Anna Irene Vedel; Lundsby, Katrine Løvenbalk; Emborg, Hanne-Dorthe.

    2009. Abstract from 12th Symposium of the International Society for Veterinary Epidemiology and Economics , Durban, South Africa.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2009

  235. 2008
  236. Published

    Animal health in Denmark 2006. / Mousing, Jan; Møller, Kristian; Vigre, Håkan.

    1 ed. Danish Veterinary and Food Administration, 2008. 54 p.

    Publication: ResearchReport – Annual report year: 2008

  237. Published

    DANMAP 2007 : DANMAP 2007 - Use of antimicrobial agents and occurrence of antimicrobial resistance in bacteria from food animals, foods and humans in Denmark. / Emborg, Hanne-Dorthe; Jensen, Vibeke Frøkjær; Larsen, Lars Stehr; Struve, Tina; Jensen, Lars Bogø; Seyfarth, Anne Mette; Agersø, Yvonne; Skjøt-Ramussen, Line; Jensen, Ulrich Stab; Olsen, Stefan Schytte; Hammerum, Anette Marie; Skov, Robert L.

    Danish Institute for Food and Veterinary Research, 2008. 108 p. (DANMAP; No. 2007).

    Publication: ResearchReport – Annual report year: 2008

  238. Published

    Ringtesten for identifikation og resistensbestemmelse af mastitispatogener 2008. / Hendriksen, Rene S.; Aarestrup, Frank Møller; Krogh, Kasper; Voss, Heidi.

    Danmarks Tekniske Universitet, Fødevareinstituttet, 2008. 11 p.

    Publication: ResearchReport – Annual report year: 2008

  239. Published
  240. Published
  241. 2007
  242. Published

    Flying insects and Campylobacter. / Hald, Birthe; Sommer, Helle Mølgaard; Skovgård, Henrik.

    2007. Abstract from Poultry Zoonoses, Cambridge, United Kingdom.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2007

  243. Published

    Report of the Task Force on Zoonoses Data Collection on the Analysis of the baseline survey on the prevalence of Salmonella in broiler flocks of Gallus gallus, Part A. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2007. 85 p. (The EFSA Journal; No. 98, Vol. 2007).

    Publication: Research - peer-reviewReport – Annual report year: 2007

  244. Published

    Report of the Task Force on Zoonoses Data Collection on the Analysis of the baseline survey on the prevalence of Salmonella in holdings of broiler flocks of Gallus gallus, Part B. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2007. 86 p. (The EFSA Journal; No. 101, Vol. 2007).

    Publication: Research - peer-reviewReport – Annual report year: 2007

  245. Published

    Ringtesten for identifikation og resistensbestemmelse af mastitispatogener 2007. / Hendriksen, Rene S.; Aarestrup, Frank Møller; Krogh, Kasper.

    Danmarks Tekniske Universitet, Fødevareinstituttet, 2007. 11 p.

    Publication: ResearchReport – Annual report year: 2007

  246. 2006
  247. Published

    DANMAP 2005 : DANMAP 2005 - Use of antimicrobial agents and occurrence of antimicrobial resistance in bacteria from food animals, foods and humans in Denmark. / Agersø, Yvonne; Emborg, Hanne-Dorthe; Heuer, Ole Eske; Jensen, Vibeke Frøkjær; Seyfarth, Anne Mette; Hammerum, Anette Marie; Bagger-Skjøt, Line; Rogues, Anne-Marie; Brandt, Christian; Skov, Robert L.; Monnet, Dominique L.

    Danish Institute for Food and Veterinary Research, 2006. 100 p. (DANMAP).

    Publication: ResearchReport – Annual report year: 2006

  248. Published

    Annual Report on Zoonoses in Denmark 2006. / Helwigh, Birgitte; Hald, Tine; Ethelberg, Steen.

    The National Food Institute, Technical University of Denmark, 2006. 49 p.

    Publication: ResearchReport – Annual report year: 2006

  249. Published

    Annual Report on Zoonoses in Denmark in 2005. / Helwigh, Birgitte (Editor); Hald, Tine; Ethelberg, Steen.

    Danish Zoonosis Centre, 2006. 43 p.

    Publication: ResearchReport – Annual report year: 2006

  250. Published
  251. Published

    Preliminary Report: Analysis of the baseline study on the prevalence of Salmonella in laying hen flocks of Gallus gallus. / EFSA publication.

    Parma, Italy : European Food Safety Authority, 2006. 71 p. (The EFSA Journal; No. 81, Vol. 2006).

    Publication: Research - peer-reviewReport – Annual report year: 2006

  252. Published

    Trends and Sources of Zoonoses, Zoonotic Agents and Antimicrobial resistance in the European Union in 2004. / EFSA Publication.

    Italy : European Food Safety Authority, 2006. 275 p. (The EFSA Journal).

    Publication: Research - peer-reviewReport – Annual report year: 2006

  253. 2005
  254. Published

    Annual Report on Zoonoses in Denmark 2004. / Helwigh, Birgitte; Borck Høg, Birgitte; Hald, Tine; Sørensen, Pernille Charlotte; Ethelberg, Steen.

    Danish Zoonosis Centre, 2005. 40 p.

    Publication: ResearchReport – Annual report year: 2005

  255. 2004
  256. Published

    Estimating 4 different Salmonella prevalence values of pig carcasses from pooled samples. / Sommer, Helle Mølgaard; Andersen, Jens Strodl.

    2004. Poster session presented at 4th European Network for Business and Industial Statistics (ENBIS ), Copenhagen, Denmark.

    Publication: Research - peer-reviewPoster – Annual report year: 2004

  257. Published
  258. 2003
  259. Published

    Annual Report on Zoonoses in Denmark 2003. / Borck Høg, Birgitte; Hald, Tine; Sørensen, Pernille Charlotte; Ethelberg, Steen.

    Ministry of Food, Agriculture and Fisheries, 2003. 32 p.

    Publication: ResearchReport – Annual report year: 2003

  260. Published

    Results from EQAS 2002 : The External Quality Assurance System 2002 of the WHO Global Salmonella Surveillance and Laboratory Support Project (Global Salm-Surv). / Petersen, A.; Aarestrup, Frank Møller; Jensen, A.B.; Wong, Danilo Lo Fo; Evans, M.C.; Angulo, F.; Imhoff, B.; Binsztein, N.; Braam, P.; Jouan, M.; Wegener, H.C.; Seyfarth, Anne Mette.

    Danmarks Tekniske Universitet, Fødevareinstituttet, 2003. 8 p.

    Publication: Research - peer-reviewReport – Annual report year: 2003

  261. Published

    Results from the WHO GSS EQAS 2003 : The External Qulity Assurance system of the WHO Global Salmonella Survailliance and Laboratory Support Project. / Seyfarth, Anne Mette; Wong, Danilo Lo Fo; Aarestrup, Frank Møller; Wegener, H.C.

    Danmarks Tekniske Universitet, Fødevareinstituttet, 2003. 9 p.

    Publication: Research - peer-reviewReport – Annual report year: 2003

  262. 2002
  263. Published

    Annual Report on Zoonoses in Denmark 2001. / Hald, Tine; Brøndsted, Therese; Dresling, Annette; Ethelberg, Steen.

    Ministry of Food, Agriculture and Fisheries, 2002. 28 p.

    Publication: ResearchReport – Annual report year: 2002

  264. Published

    Annual Report on Zoonoses in Denmark 2002. / Borck Høg, Birgitte; Wingstrand, Anne; Sørensen, Pernille Charlotte; Ethelberg, Steen.

    Ministry of Food, Agriculture and Fisheries, 2002. 32 p.

    Publication: ResearchReport – Annual report year: 2002

  265. Published

    External Quality Assurance System (EQAS) of the WHO Global Salmonella Surveillance and Laboratory Support Project (Global Salm-Surv) Results from 2001. / Petersen, A.; Aarestrup, Frank Møller; Evans, M.C.; Jensen, A.B.; Angulo, F.; Imhoff, B.; Braam, P.; Wegener, H.C.

    Danmarks Tekniske Universitet, Fødevareinstituttet, 2002. 8 p.

    Publication: Research - peer-reviewReport – Annual report year: 2002

  266. 2001
  267. Published

    Annual Report on Zoonoses in Denmark 2000. / Hald, Tine; Brøndsted, Therese; Jørgensen, Birgitte Beck; Mølbak, Kåre.

    Ministry of Food, Agriculture and Fisheries, 2001. 32 p.

    Publication: ResearchReport – Annual report year: 2001

  268. 2000
  269. Published

    Annual Report on Zoonoses in Denmark 1999. / Brøndsted, Therese; Hald, Tine; Jørgensen, Birgitte Beck.

    Ministry of Food, Agriculture and Fisheries, 2000. 28 p.

    Publication: ResearchReport – Annual report year: 2000

  270. Published

    A Quantitative Risk Assessment Model for Campylobacter jejuni in chicken products : Variability and uncertainty for input distributions . / Sommer, Helle Mølgaard; Christensen, Bjarke Bak; Rosenquist, Hanne; L. Nielsen, Niels.

    2000. Poster session presented at Health Risk, The United Kingdom, .

    Publication: Research - peer-reviewPoster – Annual report year: 2000

  271. Published

    External Quality Assurance System (EQAS) of the WHO Global Salmonella Surveillance and Laboratory Support Project (Global Salm-Surv). / Petersen, A.; Aarestrup, Frank Møller; Wong, S.; Angulo, F.; Stöhr, K.; Wegener, H.C.

    Danmarks Tekniske Universitet, Fødevareinstituttet, 2000. 17 p.

    Publication: Research - peer-reviewReport – Annual report year: 2000

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