Division of Epidemiology and Microbial Genomics

  1. 2016
  2. Published

    Variation in the effect of carcass decontamination impacts the risk for consumers. / Ribeiro Duarte, Ana Sofia; Nauta, Maarten; Aabo, Søren.

    In: Food Control, Vol. 59, 2016, p. 12-19.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  3. 2015
  4. Published

    Aetiology-Specific Estimates of the Global and Regional Incidence and Mortality of Diarrhoeal Diseases Commonly Transmitted through Food. / Pires, Sara Monteiro; Fischer-Walker, Christa L; Lanata, Claudio F; Devleesschauwer, Brecht; Hall, Aron J; Kirk, Martyn D; Duarte, Ana S R; Black, Robert E; Angulo, Frederick J; Selvey, Linda Anne (Editor).

    In: P L o S One, Vol. 10, No. 12, e0142927, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  5. Published

    Annual Report on Zoonoses in Denmark 2014. / Wingstrand, Anne (Editor); Sørensen, Anna Irene Vedel (Editor); Helwigh, Birgitte (Editor); Müller, Luise (Editor).

    Søborg : DTU Food, 2015. 62 p. (Annual Report on Zoonoses in Denmark, Vol. 2015).

    Publication: ResearchReport – Annual report year: 2015

  6. Published

    Antibiotika til mink fra 2007-2012. / Jensen, Vibeke Frøkjær; Sommer, Helle Mølgaard; Stuve, Tina; Clausen, Jesper ; Chriél, Mariann.

    In: Dansk Pelsdyravl, No. 2, 2015, p. 34-37.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  7. Published
  8. Published

    Draft Genome Sequences of Sanguibacteroides justesenii, gen. nov., sp. nov., Strains OUH 308042T (= ATCC BAA-2681T) and OUH 334697 (= ATCC BAA-2682), Isolated from Blood Cultures from Two Different Patients. / Sydenham, Thomas Vognbjerg; Hasman, Henrik; Justesen, Ulrik Stenz.

    In: Genome Announcements, Vol. 3, No. 2, 2015, p. e00005-15 .

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  9. Published

    EFFORT: Ecology from farm to fork of microbial drug resistance and transmission. / Ribeiro Duarte, Ana Sofia (Author).

    2015. 5th Nordic One Health Conference, Friibergh, Sweden, 19/03/2014.

    Publication: ResearchSound/Visual production (digital) – Annual report year: 2015

  10. Published

    Fitting a distribution to microbial counts: Making sense of zeroes. / Ribeiro Duarte, Ana Sofia; Stockmarr, Anders; Nauta, Maarten.

    In: International Journal of Food Microbiology, Vol. 196, 2015, p. 40-50.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  11. Published

    Genomic Dissection of Travel-Associated Extended-Spectrum-Beta-Lactamase-Producing Salmonella enterica Serovar Typhi Isolates Originating from the Philippines: a One-Off Occurrence or a Threat to Effective Treatment of Typhoid Fever?. / Hendriksen, Rene S.; Leekitcharoenphon, Pimlapas; Mikoleit, Matthew; Jensen, Jacob Dyring; Kaas, Rolf Sommer; Roer, Louise; Joshi, Heena B.; Pornruangmong, Srirat; Pulsrikarn, Chaiwat; Gonzalez-Aviles, Gladys D.; Reuland, E. Ascelijn; Al Naiemi, Nashwan; Wester, Astrid Louise; Aarestrup, Frank Møller; Hasman, Henrik.

    In: Journal of Clinical Microbiology, Vol. 53, No. 2, 2015, p. 677-680.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  12. Published

    Genomic Signature of Multidrug-Resistant Salmonella enterica Serovar Typhi Isolates Related to a Massive Outbreak in Zambia between 2010 and 2012.. / Hendriksen, Rene S.; Leekitcharoenphon, Pimlapas; Lukjancenko, Oksana; Lukwesa-Musyani, Chileshe; Tambatamba, Bushimbwa; Mwaba, John; Kalonda, Annie; Nakazwe, Ruth; Kwenda, Geoffrey; Jensen, Jacob Dyring; Svendsen, Christina Aaby; Dittmann, Karen K.; Kaas, Rolf Sommer; Cavaco, Lina; Aarestrup, Frank Møller; Hasman, Henrik; Mwansa, James C. L.

    In: Journal of Clinical Microbiology, Vol. 53, No. 1, 2015, p. 262-272.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  13. Published

    High frequencies of antibiotic resistance genes in infants’ meconium and early fecal samples. / Gosalbes, M. J.; Vallès, Y.; Jiménez-Hernández, N.; Balle, C.; Riva, P.; Miravet-Verde, S.; de Vries, L. E.; Llop, S.; Agersø, Yvonne; Sørensen, S. J.; Ballester, F.; Francino, M. P.

    In: Journal of Developmental Origins of Health and Disease, 2015, p. 1-10.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  14. Published

    Impact of microbial count distributions on human health risk estimates. / Ribeiro Duarte, Ana Sofia; Nauta, Maarten.

    In: International Journal of Food Microbiology, Vol. 195, 2015, p. 48-57.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  15. Published
  16. Published
  17. Published

    Livestock-Associated Methicillin Resistant and Methicillin Susceptible Staphylococcus aureus Sequence Type (CC)1 in European Farmed Animals: High Genetic Relatedness of Isolates from Italian Cattle Herds and Humans. / Alba, Patricia; Feltrin, Fabiola; Cordaro, Gessica; Concepcion Porrero, Maria; Kraushaar, Britta; Argudin, Maria Angeles; Nykasenoja, Suvi; Monaco, Monica; Stegger, Marc; Aarestrup, Frank Møller; Butaye, Patrick; Franco, Alessia; Battisti, Antonio; Cloeckaert, Axel (Editor).

    In: P L o S One, Vol. 10, No. 8, e0137143, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  18. Published

    Overvågning og kontrol af Salmonella i svinebesætninger og svinekødsproduktion : Status 2012 og 2013. Rapport nr. 15. / Teknikergruppen for Salmonellahandlingsplan IV i svin.

    DTU Fødevareinstituttet, Fødevarestyrelsen, Landbrug og Fødevarer, Teknologisk Institut, Danske Slagtermestres Landsforening og Eurofins| Steins Laboratorium, 2015. 39 p.

    Publication: Commissioned - peer-reviewReport – Annual report year: 2015

  19. Published

    Performance, compliance and reliability of Waste stabilization pond: Effluent discharge quality and environmental protection agency standards in Ghana. / Owusu-Ansah, Emmanuel de-Graft Johnson; Sampson, Angelina; Amponsah, Samuel K.; Abaidoo, Robert C.; Hald, Tine.

    In: Research Journal of Applied Science, Engineering and Technology, Vol. 10, No. 11, 2015, p. 1293-1302.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  20. Published

    Proficiency testing for bacterial whole genome sequencing: an end-user survey of current capabilities, requirements and priorities. / Moran-Gilad, Jacob; Sintchenko, Vitali; Karlsmose Pedersen, Susanne; Wolfgang, William J.; Pettengill, James; Strain, Errol; Hendriksen, Rene S.

    In: B M C Infectious Diseases, Vol. 15, 174, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  21. Published
  22. Published

    Ringtest for identifikation og resistensbestemmelse af mastitispatogener 2014. / Cavaco, Lina; Lorenzen, Bjørn; Jensen, Jacob Dyring; Nielsen, Hanne Nørgaard; Butters, Jytte; Dahl Larsen, Heidi Kristina; Aarestrup, Frank Møller; Hendriksen, Rene S.

    Kgs. Lyngby : DTU Fødevareinstituttet, 2015. 14 p.

    Publication: ResearchReport – Annual report year: 2015

  23. Published
  24. Published

    Risk-based microbiological criteria for Campylobacter in broiler meat: A comparison of two approaches. / Nauta, Maarten; Andersen, Jens Kirk; Tuominen, Pirkko; Ranta, Jukka; Lindqvist, Roland.

    In: Food Control, Vol. 53, 2015, p. 177-184.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  25. Published

    Risk ranking of pathogens in ready-to-eat unprocessed foods of non-animal origin (FoNAO) in the EU: Initial evaluation using outbreak data (2007-2011).. / Da Silva Felício, M. T.; Hald, Tine; Liebana, E.; Allende, A.; Hugas, M.; Nguyen-The, C.; Johannessen, G. Skoien; Niskanen, T.; Uyttendaele, M.; McLauchlin, J.

    In: International Journal of Food Microbiology, Vol. 195, 2015, p. 9-19.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  26. Published

    Separate norovirus outbreaks linked to one source of imported frozen raspberries by molecular analysis, Denmark, 2010–2011. / Müller, L.; Schultz, Anna Charlotte; Fonager, J.; Jensen, T.; Lisby, M; Hindsdal, K.; Krusell, L.; Eshøj, A.; T. Møller, L.; Porsbo, Lone Jannok; E. Böttiger, B.; Kuhn, K. ; Engberg, J.; Ethelberg, S.

    In: Epidemiology and Infection, Vol. 143, No. 11, 2015, p. 2299-2307.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  27. Published

    The 16th EURL-AR Proficiency Test - Enterococci, Staphylococci and E. coli 2014. / Cavaco, Lina; Karlsmose Pedersen, Susanne; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    Lyngby : National Food Institute, Technical University of Denmark, 2015. 24 p.

    Publication: Research - peer-reviewReport – Annual report year: 2015

  28. Published

    The 17th EURL-AR Proficiency Test Salmonella, Campylobacter and genotypic characterisation 2014. / Karlsmose Pedersen, Susanne; Cavaco, Lina; Hendriksen, Rene S.; Aarestrup, Frank Møller.

    Lyngby : National Food Institute, Technical University of Denmark, 2015. 18 p.

    Publication: Research - peer-reviewReport – Annual report year: 2015

  29. Published
  30. Published

    The impact of screening-test negative samples not enumerated by MPN. / Corbellini, Luis Gustavo; Ribeiro Duarte, Ana Sofia; de Knegt, Leonardo; Silva, Luis Eduardo da; Cardoso, Marisa; Nauta, Maarten.

    In: International Journal of Food Microbiology, Vol. 205, 2015, p. 1-6.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  31. Published
  32. Published
  33. Published
  34. Published

    Typhoid fever. / Wain, John; Hendriksen, Rene S.; Mikoleit, Matthew L.; Keddy, Karen H.; Ochiai, R. Leon.

    In: Lancet, Vol. 385, No. 9973, 2015, p. 1136-1145.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  35. Published
  36. 2014
  37. Published

    Activation and polar sequestration of PopA, a c-di-GMP effector protein involved in Caulobacter crescentus cell cycle control. / Ozaki, Shogo; Schalch-Moser, Annina; Zumthor, Ludwig; Manfredi, Pablo; Ebbensgaard, Anna Elisabeth; Schirmer, Tilman; Jenal, Urs.

    In: Molecular Microbiology, Vol. 94, No. 3, 2014, p. 580-594.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  38. Published
  39. Published

    Annual Report on Zoonoses in Denmark 2013. / Sørensen, Anna Irene Vedel (Editor); Helwigh, Birgitte (Editor); Müller, Luise.

    Søborg : DTU Food, 2014. 69 p. (Annual Report on Zoonoses in Denmark).

    Publication: ResearchReport – Annual report year: 2014

  40. Published

    Antibiotic resistance and resistance genes in Escherichia coli from poultry farms, southwest Nigeria. / Adelowo, Olawale O.; Fagade, Obasola E.; Agersø, Yvonne.

    In: Journal of Infection in Developing Countries, Vol. 8, No. 9, 2014, p. 1103-1112.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  41. Published

    Antimicrobial resistance of zoonotic and commensal bacteria in Europe: The missing link between consumption and resistance in veterinary medicine. / Garcia-Migura, Lourdes; Hendriksen, Rene S.; Fraile, Lorenzo; Aarestrup, Frank Møller.

    In: Veterinary Microbiology, Vol. 170, No. 1-2, 2014, p. 1-9.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  42. Published
  43. Published

    Burden of diseases estimates associated to different red meat cooking practices. / Berjia, Firew Lemma; Poulsen, Morten; Nauta, Maarten.

    In: Food and Chemical Toxicology, Vol. 66, 2014, p. 237-244.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  44. Published

    Characterization of Extended spectrum beta-lactamases (ESBL)-producing Escherichia coli obtained from Danish pigs, pig farmers and their families from farms with high or no consumption of 3rd or 4th generation cephalosporins. / Hammerum, Anette M.; Larsen, Jesper; Dalhoff Andersen, Vibe; Lester, Camilla H; Skytte, Timmy S. Skovgaard; Hansen, Frank ; Olsen, Stefan S.; Mordhorst, Hanne; Skov, Robert L.; Aarestrup, Frank Møller; Agersø, Yvonne.

    In: Journal of Antimicrobial Chemotherapy, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  45. Published

    Characterization of methicillin-resistant Staphylococcus aureus Sequence Type 398. / Christiansen, Mette Theilgaard; Aarestrup, Frank Møller (Main supervisor); Hasman, Henrik (Supervisor); Agersø, Yvonne (Supervisor).

    Søborg : National Food Institute, Technical University of Denmark, 2014. 204 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2014

  46. Published
  47. Published

    DANMAP 2013 : Use of antimicrobial agents and occurrence of antimicrobial resistance in bacteria from food animals, food and humans in Denmark. / Agersø, Yvonne; Bager, Flemming; Boel, Jeppe; Helwigh, Birgitte; Borck Høg, Birgitte; Jensen, Lars Bogø; de Knegt, Leonardo; Korsgaard, Helle; Larsen, Lars Stehr; Sørensen, Anna Irene Vedel; Dalby, Tine; Hammerum, Anette M.; Hoffmann, Steen; Gaardbo Kuhn, Katrin; Rhod Larsen, Anders; Laursen, Maja; Nielsen, Eva Møller; Olsen, Stefan S.; Petersen, Andreas; Bagger-Skjøt, Line; Skov, Robert L.; Slotved, Hans-Christian; Torpdahl, Mia.

    Statens Serum Institut, 2014. 106 p.

    Publication: Commissioned - peer-reviewReport – Annual report year: 2014

  48. Published

    Detection and linkage to mobile genetic elements of tetracycline resistance gene tet(M) in Escherichia coli isolates from pigs. / Jurado-Rabadan, Sonia; de la Fuente, Ricardo; Ruiz-Santa-Quiteria, Jose A.; Orden, Jose A.; de Vries, Lisbeth Elvira; Agersø, Yvonne.

    In: B M C Veterinary Research, Vol. 10, No. 1, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  49. Published

    Diversity and antimicrobial susceptibility of Salmonella enterica serovars isolated from pig farms in Ibadan, Nigeria. / Fashae, Kayode; Hendriksen, Rene S.

    In: Folia Microbiologica, Vol. 59, No. 1, 2014, p. 69-77.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  50. Published

    Effect of subinhibitory concentrations of four commonly used biocides on the conjugative transfer of Tn916 in Bacillus subtilis. / Seier-Petersen, Maria Amalie; Jasni, A.; Aarestrup, Frank Møller; Vigre, Håkan; Mullany, P.; Roberts, A. P.; Agersø, Yvonne.

    In: Journal of Antimicrobial Chemotherapy, Vol. 69, No. 2, 2014, p. 343-348.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  51. Published

    EFSA BIOHAZ Panel (EFSA Panel on Biological Hazards), 2013. Scientific Opinion on Bioreduction application. / EFSA Publication.

    Parma, Italy : Europen Food Safety Authority, 2014. 13 p. (The EFSA Journal; No. 3503, Vol. 11(12)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2014

  52. Published

    EFSA BIOHAZ Panel (EFSA Panel on Biological Hazards), 2013. Scientific Opinion on Carbapenem resistance in food animal ecosystems. / EFSA Publication.

    Parma, Italy : Europen Food Safety Authority, 2014. 70 p. (The EFSA Journal; No. 3501, Vol. 11(12)).

    Publication: Commissioned - peer-reviewReport – Annual report year: 2014

  53. Published
Previous 1 2 3 4 5 6 7 Next
Download list:
Download as PDF
Select render style:
APAAuthorCBE/CSEHarvardMLAStandardVancouverShortLong
PDF
Download as HTML
Select render style:
APAAuthorCBE/CSEHarvardMLAStandardVancouverShortLong
HTML
Download as Word
Select render style:
APAAuthorCBE/CSEHarvardMLAStandardVancouverShortLong
Word