Department of Systems Biology

  1. 2016
  2. Published

    Asparaginase-associated pancreatitis: a study on phenotype and genotype in the NOPHO ALL2008 protocol. / Wolthers, B. O.; Frandsen, Thomas L.; Abrahamsson, Jonas; Albertsen, B. K.; Helt, L. R.; Heyman, Mats; Jonsson, Olafur G.; Korgvee, L. T.; Lund, B.; Raja, R. A.; Rasmussen, K. K.; Taskinen, M.; Tulstrup, M.; Vaitkeviciene, G. E.; Yadav, Rachita; Gupta, R.; Schmiegelow, K.

    In: Leukemia, Vol. 31, No. 2, 2016, p. 325-332.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  3. Published

    Aspergillus section Nidulantes (formerly Emericella): Polyphasic taxonomy, chemistry and biology. / Chen, A.J.; Frisvad, Jens Christian; Sun, B.D.; Varga, J.; Kocsubé, S.; Dijksterhuis, J.; Kim, D.H.; Hong, S.-B.; Houbraken, J.; Samson, R.A.

    In: Studies in Mycology, Vol. 84, 2016, p. 1-118.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  4. Published

    aspMine - online comparative analysis of species from the Aspergillus genus. / Vesth, Tammi Camilla; Rasmussen, Jane Lind Nybo; Theobald, Sebastian; de Vries, Ronald P.; Grigoriev, Igor V.; Baker, Scott E.; Andersen, Mikael Rørdam.

    Book of abstracts from the 13th European Conference on Fungal Genetics. 2016. p. 71-71 CS5.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2016

  5. Published

    A tropical tale: how Naja nigricollis venom beats Trypanosoma brucei. / Martos Esteban, Andrea; Laustsen, Andreas Hougaard; Carrington, Mark.

    2016. Poster session presented at Symposium for Biological and Life Science Students (SymBLS) 2016, Cambridge, United Kingdom.

    Publication: Research - peer-reviewPoster – Annual report year: 2016

  6. Published

    Automated Clustering Analysis of Immunoglobulin Sequences in Chronic Lymphocytic Leukemia Based on 3D Structural Descriptors. / Marcatili, Paolo; Mochament, Konstantinos; Agathangelidis, Andreas; Moschonas, Panagiotis; Sutton, Lesley-Ann; Yan, Xiao-Jie; Bikos, Vasilis; Vardi, Anna; Chailyan, Anna ; Stavroyianni, Niki ; Jensen, Kamilla Kjærgaard; Anagnostopoulos, Achilles; Chiorazzi, Nicholas; Belessi, Chrysoula ; Rosenquist, Richard; Ghia, Paolo ; Stamatopoulos, Kostas ; Hadzidimitriou, Anastasia ; Tzovaras, Dimitrios .

    In: Blood, Vol. 128, No. 22, 2016, p. 4365.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  7. Published

    Bacterial evolution in PCD and CF patients follows the same mutational steps. / Madsen Sommer, Lea Mette; Alanin, Mikkel Christian; Marvig, Rasmus L.; Nielsen, Kim Gjerum; Høiby, Niels; Von Buchwald, Christian; Molin, Søren; Johansen, Helle Krogh.

    In: Scientific Reports, Vol. 6, 28732, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  8. Published

    Barley germination : Spatio-temporal considerations for designing and interpreting 'omics' experiments. / Daneri-Castro, Sergio N.; Svensson, Birte; Roberts, Thomas H.

    In: Journal of Cereal Science, Vol. 70, 2016, p. 29-37.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  9. Published

    BCL9L Dysfunction Impairs Caspase-2 Expression Permitting Aneuploidy Tolerance in Colorectal Cancer. / López-García, Carlos; Sansregret, Laurent; Domingo, Enric; McGranahan, Nicholas; Hobor, Sebastijan; Birkbak, Nicolai Juul; Horswell, Stuart; Grönroos, Eva; Favero, Francesco; Rowan, Andrew J.; Matthews, Nicholas; Begum, Sharmin; Phillimore, Benjamin; Burrell, Rebecca; Oukrif, Dahmane; Spencer-Dene, Bradley; Kovac, Michal; Stamp, Gordon; Stewart, Aengus; Danielsen, Havard; Novelli, Marco; Tomlinson, Ian; Swanton, Charles.

    In: Cancer Cell, Vol. 31, No. 1, 2016, p. 79-93.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  10. Published

    Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data. / Clausen, Philip T. L. C.; Zankari, Ea; Aarestrup, Frank Møller; Lund, Ole.

    In: Journal of Antimicrobial Chemotherapy, Vol. 71, No. 9, 2016, p. 2484-2488.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  11. Published

    Benchtop Whole-Genome Sequencing for Identification of Nosocomial Outbreaks in Tanzania. / Sonda, Tolbert; Kumburu, Happiness; Zwetselaar, Marco van; Ahrenfeldt, Johanne; Alifrangis, Michael; Lund, Ole; Kibiki, Gibson; Aarestrup, Frank Møller.

    In: Infection Control & Hospital Epidemiology, Vol. 37, No. 5, 2016, p. 622-623.

    Publication: Research - peer-reviewComment/debate – Annual report year: 2016

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