Department of Systems Biology

  1. 2016
  2. Published

    Automated Clustering Analysis of Immunoglobulin Sequences in Chronic Lymphocytic Leukemia Based on 3D Structural Descriptors. / Marcatili, Paolo; Mochament, Konstantinos; Agathangelidis, Andreas; Moschonas, Panagiotis; Sutton, Lesley-Ann; Yan, Xiao-Jie; Bikos, Vasilis; Vardi, Anna; Chailyan, Anna ; Stavroyianni, Niki ; Jensen, Kamilla Kjærgaard; Anagnostopoulos, Achilles; Chiorazzi, Nicholas; Belessi, Chrysoula ; Rosenquist, Richard; Ghia, Paolo ; Stamatopoulos, Kostas ; Hadzidimitriou, Anastasia ; Tzovaras, Dimitrios .

    In: Blood, Vol. 128, No. 22, 2016, p. 4365.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  3. Published

    Bacterial evolution in PCD and CF patients follows the same mutational steps. / Madsen Sommer, Lea Mette; Alanin, Mikkel Christian; Marvig, Rasmus L.; Nielsen, Kim Gjerum; Høiby, Niels; Von Buchwald, Christian; Molin, Søren; Johansen, Helle Krogh.

    In: Scientific Reports, Vol. 6, 28732, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  4. Published

    Barley germination : Spatio-temporal considerations for designing and interpreting 'omics' experiments. / Daneri-Castro, Sergio N.; Svensson, Birte; Roberts, Thomas H.

    In: Journal of Cereal Science, Vol. 70, 2016, p. 29-37.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  5. Published

    BCL9L Dysfunction Impairs Caspase-2 Expression Permitting Aneuploidy Tolerance in Colorectal Cancer. / López-García, Carlos; Sansregret, Laurent; Domingo, Enric; McGranahan, Nicholas; Hobor, Sebastijan; Birkbak, Nicolai Juul; Horswell, Stuart; Grönroos, Eva; Favero, Francesco; Rowan, Andrew J.; Matthews, Nicholas; Begum, Sharmin; Phillimore, Benjamin; Burrell, Rebecca; Oukrif, Dahmane; Spencer-Dene, Bradley; Kovac, Michal; Stamp, Gordon; Stewart, Aengus; Danielsen, Havard; Novelli, Marco; Tomlinson, Ian; Swanton, Charles.

    In: Cancer Cell, Vol. 31, No. 1, 2016, p. 79-93.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  6. Published

    Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data. / Clausen, Philip T. L. C.; Zankari, Ea; Aarestrup, Frank Møller; Lund, Ole.

    In: Journal of Antimicrobial Chemotherapy, Vol. 71, No. 9, 2016, p. 2484-2488.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  7. Published

    Benchtop Whole-Genome Sequencing for Identification of Nosocomial Outbreaks in Tanzania. / Sonda, Tolbert; Kumburu, Happiness; Zwetselaar, Marco van; Ahrenfeldt, Johanne; Alifrangis, Michael; Lund, Ole; Kibiki, Gibson; Aarestrup, Frank Møller.

    In: Infection Control & Hospital Epidemiology, Vol. 37, No. 5, 2016, p. 622-623.

    Publication: Research - peer-reviewComment/debate – Annual report year: 2016

  8. Published
  9. Published
  10. Published

    Biogeography and environmental genomics of the Roseobacter-affiliated pelagic CHAB-I-5 lineage. / Billerbeck, Sara; Wemheuer, Bernd; Voget, Sonja; Poehlein, Anja; Giebel, Helge-Ansgar; Brinkhoff, Thorsten; Gram, Lone; Jeffrey, Wade H.; Daniel, Rolf; Simon, Meinhard.

    In: Nature Microbiology, Vol. 1, No. 7, 16063, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  11. Published

    Biological Potential of Chitinolytic Marine Bacteria. / Paulsen, Sara Skøtt; Andersen, Birgitte; Gram, Lone; Machado, Henrique.

    In: Marine Drugs, Vol. 14, No. 12, 2016, p. 230.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

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