Department of Systems Biology

  1. 2017
  2. Published

    Modifiable risk factors promoting neurodegeneration is associated with two novel brain degradation markers measured in serum. / Neergaard, Jesper; Møller, Katrine Dragsbæk; Christiansen, Claus; Nielsen, Henning B.; Workman, Christopher; Pedersen, Susanne Brix; Henriksen, Kim; Karsdal, Morten Asser.

    In: Neurochemistry International, Vol. 108, 2017, p. 303-308.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  3. Published

    Modifications of TIGIT expression contribute to CD8 T cell exhaustion in chronic virus infection. / Tauriainen, Johanna; Scharf, Lydia; Frederiksen, Juliet Wairimu; Naji, Ali; Ljunggren, Hans-Gustaf; Sonnerborg, Anders; Lund, Ole; Reyes-Teran, Gustavo; Hecht, Frederick M.; Deeks, Steven G.; Betts, Michael R.; Buggert, Marcus; Karlsson, Annika C.

    In: Scandinavian Journal of Immunology, Vol. 86, No. 4, 2017, p. 318.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  4. Published

    Network reconstruction of the mouse secretory pathway applied on CHO cell transcriptome data. / Lund, Anne Mathilde; Kaas, Christian Schrøder; Brandl, Julian; Pedersen, Lasse Ebdrup; Kildegaard, Helene Faustrup; Kristensen, Claus; Andersen, Mikael Rørdam.

    In: B M C Systems Biology, Vol. 11, No. 1, 37, 2017.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  5. Published

    Neuroplasticity pathways and protein-interaction networks are modulated by vortioxetine in rodents. / Waller, Jessica A.; Nygaard, Sara Holm; Li, Yan; Jardin, Kristian Gaarn; Tamm, Joseph A.; Abdourahman, Aicha; Elfving, Betina; Pehrson, Alan L.; Sanchez, Connie; Wernersson, Rasmus.

    In: BMC Neuroscience, Vol. 18, No. 1, 56, 2017.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  6. Published

    Novel genes involved in pathophysiology of gonadotropin-dependent adrenal tumors in mice. / Doroszko, Milena; Chrusciel, Marcin; Belling, Kirstine González-Izarzugaza; Vuorenoja, Susanna; Dalgaard, Marlene Danner; Leffers, Henrik; Nielsen, Henrik Bjørn; Huhtaniemi, Ilpo; Toppari, Jorma; Rahman, Nafis A.

    In: Molecular and Cellular Endocrinology, Vol. 444, 2017, p. 9-18.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  7. Published

    NutriChem 2.0: exploring the effect of plant-based foods on human health and drug efficacy. / Ni, Yueqiong; Jensen, Kasper; Kouskoumvekaki, Eirini; Panagiotou, Gianni.

    In: Database, Vol. 2017, No. 1, bax044, 2017.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  8. Published

    Obesity is associated with depot-specific alterations in adipocyte DNA methylation and gene expression. / Sonne, Si Brask; Yadav, Rachita; Yin, Guangliang; Dalgaard, Marlene Danner; Myrmel, Lene Secher; Gupta, Ramneek; Wang, Jun; Madsen, Lise; Kajimura, Shingo; Kristiansen, Karsten.

    In: Adipocyte (Philadelphia), Vol. 6, No. 2, 2017, p. 124-133.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  9. Published

    Occurrence and fumonisin B2 producing potential of Aspergillus section Nigri in Brazil nuts. / Ferranti, Larissa S.; Correa, Benedito; Fungaro, Maria Helena P.; Iamanaka, Beatriz T.; Massi, Fernanda P.; Phippen, Christopher B W; Frisvad, Jens Christian; Taniwaki, Marta H.

    In: Mycotoxin Research, Vol. 33, No. 1, 2017, p. 49–58.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  10. Published

    Oscillospira and related bacteria - from metagenomics species to metabolic features. / Gophna, Uri; Konikoff, Tom; Nielsen, Henrik Bjørn.

    In: Environmental Microbiology, Vol. 19, No. 3, 2017, p. 835-841.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  11. Published

    PanViz: interactive visualization of the structure of functionally annotated pangenomes. / Pedersen, Thomas Lin; Nookaew, Intawat; Wayne Ussery, David; Månsson, Maria.

    In: Bioinformatics, Vol. 33, No. 7, btw761, 2017, p. 1081-1082.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

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