Department of Systems Biology
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In vitro growth of four individual human gut bacteria on oligosaccharides produced by chemoenzymatic synthesis.. / Vigsnæs, Louise Kristine; Nakai, Hiroyuki; Hemmingsen, Lene; Andersen, Joakim Mark; Lahtinen, Sampo J; Rasmussen, Louise Enggaard; Abou Hachem, Maher ; Petersen, Bent O.; Duus, Jens Øllgaard; Meyer, Anne S.; Licht, Tine Rask; Svensson, Birte.
In: Food & Function, Vol. 4, No. 5, 2013, p. 784-793.Publication: Research - peer-review › Journal article – Annual report year: 2013
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High beta-Lactamase Levels Change the Pharmacodynamics of beta-Lactam Antibiotics in Pseudomonas aeruginosa Biofilms. / Wang, Hengzhuang; Ciofu, Oana; Yang, Liang; Wu, Hong; Song, Zhijun; Oliver, Antonio; Hoiby, Niels.
In: Antimicrobial Agents and Chemotherapy, Vol. 57, No. 1, 2013, p. 196-204.Publication: Research - peer-review › Journal article – Annual report year: 2013
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Fusarium graminearum and Its Interactions with Cereal Heads: Studies in the Proteomics Era.. / Yang, Fen; Jacobsen, Susanne; Jørgensen, Hans J L; Collinge, David B.; Svensson, Birte; Finnie, Christine.
In: Frontiers in Plant Science, Vol. 4, 2013, p. 37.Publication: Research - peer-review › Journal article – Annual report year: 2013
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In Vivo SILAC-Based Proteomics Reveals Phosphoproteome Changes during Mouse Skin Carcinogenesis. / Zanivan, Sara; Meves, Alexander; Behrendt, Kristina; Schoof, Erwin; Neilson, Lisa J.; Cox, Jürgen; Tang, Hao R.; Kalna, Gabriela; van Ree, Janine H.; van Deursen, Jan M.; Trempus, Carol S.; Machesky, Laura M.; Linding, Rune; Wickström, Sara A.; Fässler, Reinhard; Mann, Matthias.
In: Cell Reports, Vol. 3, No. 2, 2013, p. 552-566.Publication: Research - peer-review › Journal article – Annual report year: 2013
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Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing. / Zankari, Ea; Hasman, Henrik; Kaas, Rolf Sommer; Seyfarth, Anne Mette; Agersø, Yvonne; Lund, Ole; Larsen, Mette Voldby; Aarestrup, Frank Møller.
In: Journal of Antimicrobial Chemotherapy, Vol. 68, No. 4, 2013, p. 771-777.Publication: Research - peer-review › Journal article – Annual report year: 2012
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Microbial isoprenoid production. / Carlsen, Simon; Kielland-Brandt, Morten (Supervisor); Eliasson Lantz, Anna (Supervisor); Nielsen, Michael Lynge (Supervisor).
Department of Systems Biology, DTU, 2012. 263 p.Publication: Research › Ph.d. thesis – Annual report year: 2013
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Mapping of secondary metabolites to their synthase genes in Aspergillus species. / Klejnstrup, Marie Louise; Larsen, Thomas Ostenfeld (Main supervisor); Gotfredsen, Charlotte Held (Supervisor); Mortensen, Uffe Hasbro (Supervisor).
Department of Systems Biology, DTU, 2012. 306 p.Publication: Research › Ph.d. thesis – Annual report year: 2013
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Investigating genotype-phenotype relationships in Saccharomyces cerevisiae metabolic network through stoichiometric modeling. / Brochado, Ana Rita; Mortensen, Uffe Hasbro (Supervisor); Patil, Kiran Raosaheb (Supervisor).
Department of Systems Biology, DTU, 2012. 165 p.Publication: Research › Ph.d. thesis – Annual report year: 2013
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Raffinose family oligosaccharide utilisation by probiotic bacteria: insight into substrate recognition, molecular architecture and diversity of GH36 alpha-galactosidases. / Abou Hachem, Maher ; Fredslund, Folmer; Andersen, Joakim Mark; Larsen, Rene Jonsgaard; Majumder, Avishek; Hansen, Morten Ejby; van Zanten, Gabriella Christina; Lahtinen, S. J.; Barrangou, R.; Klaenhammer, T.; Jacobsen, S.; Coutinho, P. M.; Lo Leggio, Leila; Svensson, Birte.
In: Biocatalysis and Biotransformation, Vol. 30, No. 3, 2012, p. 316-325.Publication: Research - peer-review › Journal article – Annual report year: 2012
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Chemical and molecular characterization of Phomopsis and Cytospora-like endophytes from different host plants in Brazil. / Abreu, Lucas M.; Costa, Sarah S.; Pfenning, Ludwig H.; Takahashi, Jacqueline A.; Larsen, Thomas Ostenfeld; Andersen, Birgitte.
In: Fungal Biology, Vol. 116, No. 2, 2012, p. 249-260.Publication: Research - peer-review › Journal article – Annual report year: 2012