Department of Systems Biology

  1. 2017
  2. Published

    ArrayPitope: Automated Analysis of Amino Acid Substitutions for Peptide Microarray-Based Antibody Epitope Mapping. / Hansen, Christian Skjødt; Østerbye, Thomas; Marcatili, Paolo; Lund, Ole; Buus, Søren; Nielsen, Morten.

    In: P L o S One, Vol. 12, No. 1, e0168453, 2017.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  3. Published

    A scored human protein-protein interaction network to catalyze genomic interpretation. / Li, Taibo; Wernersson, Rasmus; Hansen, Rasmus B; Horn, Heiko; Mercer, Johnathan; Slodkowicz, Grzegorz; Workman, Christopher T.; Rigina, Olga; Rapacki, Kristoffer; Stærfeldt, Hans Henrik; Brunak, Søren; Jensen, Thomas S.; Lage, Kasper.

    In: Nature Methods, Vol. 14, 2017, p. 61–64.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  4. Published

    Biodiversity of mycobiota throughout the Brazil nut supply chain: From rainforest to consumer. / Taniwaki, Marta H.; Frisvad, Jens Christian; Ferranti, Larissa S.; de Souza Lopes, Aline; Larsen, Thomas Ostenfeld; Fungaro, Maria Helena P.; Iamanaka, Beatriz T.

    In: Food Microbiology, Vol. 61, 2017, p. 14-22.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  5. Accepted/In press

    Breadth of T cell responses after immunization with adenovirus vectors encoding ancestral antigens or polyvalent papillomavirus antigens. / Ragonnaud, Emeline; Pedersen, Anders Gorm; Holst, Peter Johannes.

    In: Scandinavian Journal of Immunology, 2017.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  6. E-pub ahead of print

    Critical review on biofilm methods. / Azeredo, Joana; F. Azevedo, Nuno; Briandet, Romain; Cerca, Nuno; Coenye, Tom; Rita Costa, Ana; Desvaux, Mickaël; Di Bonaventura, Giovanni; Hébraud, Michel; Jaglic, Zoran; Kačániová, Miroslava; Knøchel, Susanne; Lourenço, Anália; Mergulhão, Filipe; Meyer, Rikke Louise; Nychas, George; Simões, Manuel; Sternberg, Claus.

    In: Critical Reviews in Microbiology, 2017.

    Publication: Research - peer-reviewReview – Annual report year: 2016

  7. Published

    Exploring the venom of the forest cobra snake: Toxicovenomics and antivenom profiling of Naja melanoleuca. / Lauridsen, Line P.; Laustsen, Andreas Hougaard; Lomonte, Bruno; Gutiérrez, José María.

    In: Journal of Proteomics, Vol. 150, 2017, p. 98-108.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  8. Published

    Functional Reconstitution of a Fungal Natural Product Gene Cluster by Advanced Genome Editing. / Weber, Jakob; Valiante, Vito ; Nødvig, Christina Spuur; Mattern, Derek J. ; Slotkowski, Rebecca A. ; Mortensen, Uffe Hasbro; Brakhage, Axel A. .

    In: A C S Synthetic Biology, Vol. 6, No. 1, 2017, p. 62–68.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  9. Published

    Global occurrence and heterogeneity of the Roseobacter-clade species Ruegeria mobilis. / Sonnenschein, Eva; Nielsen, Kristian Fog; D'Alvise, Paul; Porsby, Cisse Hedegaard; Melchiorsen, Jette; Heilmann, Jens; Kalatzis, Panos G.; López-Pérez, Mario; Bunk, Boyke; Spröer, Cathrin; Middelboe, Mathias; Gram, Lone.

    In: The I S M E Journal, Vol. 11, 2017, p. 569–583.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  10. E-pub ahead of print

    Hierarchical Sets: Analyzing Pangenome Structure through Scalable Set Visualizations. / Pedersen, Thomas Lin.

    In: Bioinformatics, 2017.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  11. Published

    Meta-Analysis of Genome-Wide Association Studies for Abdominal Aortic Aneurysm Identifies Four New Disease-Specific Risk Loci. / Jones, Gregory T; Tromp, Gerard; Kuivaniemi, Helena; Gretarsdottir, Solveig; Baas, Annette F; Giusti, Betti; Strauss, Ewa; van 't Hof, Femke N; Webb, Thomas; Erdman, Robert; Lindholt, Jes S.; Folkersen, Lasse.

    In: Circulation Research, Vol. 120, 116.308765, 2017, p. 341-353.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

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