CFB - Bacterial Cell Factory

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  1. 2013
  2. Published

    Comparative study on aptamers as recognition elements for antibiotics in a label-free all-polymer biosensor. / Dapra, Johannes; Lauridsen, Lasse Holm; Nielsen, Alex Toftgaard; Rozlosnik, Noemi.

    In: Biosensors and Bioelectronics, Vol. 43, No. 1, 2013, p. 315-320.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  3. Published

    High in vitro antimicrobial activity of β-peptoid-peptide hybrid oligomers against planktonic and biofilm cultures of Staphylococcus epidermidis.. / Liu, Yang; Knapp, Kolja Michael; Yang, Liang; Molin, Søren; Franzyk, Henrik; Folkesson, Anders.

    In: International Journal of Antimicrobial Agents, Vol. 41, No. 1, 2013, p. 20-27.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  4. Published

    Production of 3-O-xylosyl quercetin in Escherichia coli. / Pandey, Ramesh Prasad; Malla, Sailesh; Simkhada, Dinesh; Kim, Byung-Gee; Sohng, Jae Kyung.

    In: Applied Microbiology and Biotechnology, Vol. 97, No. 5, 2013, p. 1889-1901.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  5. 2012
  6. Published

    A complex multilevel attack on Pseudomonas aeruginosa algT/U expression and AlgT/U activity results in the loss of alginate production. / Sautter, Robert; Ramos, Damaris; Schneper, Lisa; Ciofu, Oana; Wassermann, Tina; Koh, Chong-Lek; Heydorn, Arne; Hentzer, Morton; Høiby, Niels; Kharazmi, Arsalan; Molin, Søren; DeVries, Caroline A.; Ohman, Dennis E.; Mathee, Kalai.

    In: Gene, Vol. 498, No. 2, 2012, p. 242-253.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  7. Published

    Adaptation of Pseudomonas aeruginosa to the cystic fibrosis airway: an evolutionary perspective.. / Folkesson, Anders; Jelsbak, Lars; Yang, Lei; Johansen, Helle Krogh; Ciofu, Oana; Høiby, Niels; Molin, Søren.

    In: Nature Reviews. Microbiology, Vol. 10, No. 12, 2012.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  8. Published

    Amplification and Re-Generation of LNA-Modified Libraries. / Doessing, Holger; Hansen, Lykke H.; Veedu, Rakesh N.; Wengel, Jesper; Vester, Birte.

    In: Molecules, Vol. 17, No. 11, 2012, p. 13087.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  9. Published

    Application of split-green fluorescent protein for topology mapping membrane proteins in Escherichia coli. / Toddo, Stephen; Soderstrom, Bill; Palombo, Isolde; von Heijne, Gunnar; Nørholm, Morten; Daley, Daniel O.

    In: Protein Science, Vol. 21, No. 10, 2012, p. 1571-1576.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  10. Published

    Combating biofilms. / Yang, Liang; Liu, Yang; Wu, Hong; Song, Zhijun; Hoiby, Niels; Molin, Søren; Givskov, Michael.

    In: F E M S Immunology and Medical Microbiology, Vol. 65, No. 2, Sp. Iss. SI, 2012, p. 146-157.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  11. Published

    Context matters — the complex interplay between resistome genotypes and resistance phenotypes. / Dantas, Gautam; Sommer, Morten.

    In: Current Opinion in Microbiology, Vol. 15, No. 5, 2012, p. 577-582.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  12. Published

    Deletion and acquisition of genomic content during early stage adaptation of Pseudomonas aeruginosa to a human host environment. / Rau, Martin H.; Marvig, Rasmus Lykke; Ehrlich, Garth D.; Molin, Søren; Jelsbak, Lars.

    In: Environmental Microbiology, Vol. 14, No. 8, 2012, p. 2200-2211.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  13. Published

    Early genetic adaptation associated with chronic pseudomonas aeruginosa airways infection. / Johansen, H. K.; Aanaes, K.; Pressler, Tacjana; Skov, M.; Nielsen, K. G.; Ciofu, Oana; Buchwald, C.; Hoiby, N.; Molin, Søren.

    In: Pediatric Pulmonology, Vol. 47, No. S35, 2012, p. 328-329.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  14. Published

    Enzymatic Recognition of 2′‐Modified Ribonucleoside 5′‐Triphosphates: Towards the Evolution of Versatile Aptamers. / Lauridsen, Lasse Holm; Rothnagel, Joseph A.; Veedu, Rakesh N.

    In: ChemBioChem, Vol. 13, No. 1, 2012, p. 19-25.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  15. Published

    Evolutionary dynamics of pseudomonas aeruginosa in CF. / Molin, Soren; Jelsbak, Lars; Johansen, Helle; Hoiby, Niels.

    In: Pediatric Pulmonology, Vol. 47, 2012, p. 152-153.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  16. Published

    Genetics of Polyketide Metabolism in Aspergillus nidulans. / Klejnstrup, Marie L.; Frandsen, Rasmus John Normand; Holm, Dorte Koefoed; Nielsen, Morten Thrane; Mortensen, Uffe Hasbro; Larsen, Thomas Ostenfeld; Nielsen, Jakob Blæsbjerg.

    In: Metabolites, Vol. 2, No. 1, 2012, p. 100-133.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  17. Published

    Genome‐wide identification of novel small RNAs in Pseudomonas aeruginosa. / Gómez Lozano, María; Marvig, Rasmus Lykke; Molin, Søren; Long, Katherine.

    In: Environmental Microbiology, Vol. 14, No. 8, 2012, p. 2006-2016.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  18. Published

    Initial Pseudomonas aeruginosa infection in patients with cystic fibrosis: characteristics of eradicated and persistent isolates. / Tramper-Stranders, G. A.; van der Ent, C. K.; Molin, Søren; Yang, Liang; Hansen, Susse Kirkelund; Rau, Martin Holm; Ciofu, Oana; Johansen, H. K.; Wolfs, T. F. W.

    In: Clinical Microbiology and Infection, Vol. 18, No. 6, 2012, p. 567-574.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  19. Published

    Involvement of a Natural Fusion of a Cytochrome P450 and a Hydrolase in Mycophenolic Acid Biosynthesis. / Hansen, Bjarne Gram; Mnich, Ewelina; Nielsen, Kristian Fog; Nielsen, Jakob Blæsbjerg; Nielsen, Morten Thrane; Mortensen, Uffe Hasbro; Larsen, Thomas Ostenfeld; Patil, Kiran Raosaheb.

    In: Applied and Environmental Microbiology, Vol. 78, No. 14, 2012, p. 4908-4913.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  20. Published

    Mutations in 23S rRNA Confer Resistance against Azithromycin in Pseudomonas aeruginosa. / Marvig, Rasmus Lykke; Søndergaard, Mette S. R.; Pedersen, Søren Damkiær; Høiby, Niels; Johansen, Helle Krogh; Molin, Søren; Jelsbak, Lars.

    In: Antimicrobial Agents and Chemotherapy, Vol. 56, No. 8, 2012, p. 4519-4521.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  21. Published

    Nucleic Acid Aptamers Against Biotoxins: A New Paradigm Toward the Treatment and Diagnostic Approach. / Lauridsen, Lasse Holm; Veedu, Rakesh N.

    In: Nucleic Acid Therapeutics, Vol. 22, No. 6, 2012.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  22. Published

    Peptide‐MHC class I stability is a better predictor than peptide affinity of CTL immunogenicity. / Harndahl, Mikkel Nors; Rasmussen, Michael; Roder, Gustav; Dalgaard Pedersen, Ida; Sørensen, Mikael; Nielsen, Morten; Buus, Søren.

    In: European Journal of Immunology, Vol. 42, No. 6, 2012, p. 1405-1416.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  23. Published

    Polysaccharides serve as scaffold of biofilms formed by mucoid Pseudomonas aeruginosa.. / Yang, Liang; Hengzhuang, Wang; Wu, Hong; Pedersen, Søren Damkiær; Jochumsen, Nicholas; Song, Zhijun; Givskov, Michael Christian; Høiby, Niels; Molin, Søren.

    In: F E M S Immunology and Medical Microbiology, Vol. 65, No. 2, 2012, p. 366-376.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  24. Published

    Rapid One-Step Selection Method for Generating Nucleic Acid Aptamers: Development of a DNA Aptamer against alpha-Bungarotoxin. / Lauridsen, Lasse Holm; Shamaileh, Hadi A.; Edwards, Stacey L.; Taran, Elena; Veedu, Rakesh N.

    In: P L o S One, Vol. 7, No. 7, 2012, p. e41702.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  25. Published

    Resistance to Linezolid Caused by Modifications at Its Binding Site on the Ribosome. / Long, Katherine S.; Vester, Birte.

    In: Antimicrobial Agents and Chemotherapy, Vol. 56, No. 2, 2012, p. 603-612.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  26. Published

    SarA is a negative regulator of Staphylococcus epidermidis biofilm formation. / Martin, Christer; Heinze, C.; Busch, M.; Franke, G.; Hentschke, M.; Dühring, Sara Bayard; Buettner, H.; Kotasinska, M.; Wischnewski, V.; Buck, F.; Molin, Søren; Otto, Michael; Rohde, Henning.

    In: International Journal of Medical Microbiology, Vol. 302, 2012.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  27. Published

    Staphylococcus epidermidis recovered from indwelling catheters exhibit enhanced biofilm dispersal and "self-renewal" through downregulation of agr. / Dai, Lu; Yang, Liang; Parsons, Chris; Findlay, Victoria J.; Molin, Søren; Qin, Zhiqiang.

    In: B M C Microbiology, Vol. 12, 2012, p. Article No.: 102.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  28. Published

    The Order Bacillales Hosts Functional Homologs of the Worrisome cfr Antibiotic Resistance Gene. / Hansen, Lykke H.; Planellas, Mercè H.; Long, Katherine S.; Vester, Birte.

    In: Antimicrobial Agents and Chemotherapy, Vol. 56, No. 7, 2012, p. 3563-3567.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  29. Published

    The PurR regulon in Lactococcus lactis – transcriptional regulation of the purine nucleotide metabolism and translational machinery. / Jendresen, Christian Bille; Martinussen, Jan; Kilstrup, Mogens.

    In: Microbiology, Vol. 158, No. 8, 2012, p. 2026-38.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  30. Published

    The Shared Antibiotic Resistome of Soil Bacteria and Human Pathogens. / Forsberg, Kevin J.; Reyes, Alejandro; Wang, Bin; Selleck, Elizabeth M.; Sommer, Morten O. A.; Dantas, Gautam.

    In: Science, Vol. 337, No. 6098, 2012, p. 1107-1111.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  31. 2011
  32. Published

    Antibiotics and the resistant microbiome. / Sommer, Morten; Dantas, Gautam.

    In: Current Opinion in Microbiology, Vol. 14, No. 5, 2011, p. 556-563.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  33. 2009
  34. Published

    Ltx 109 Is a Novel Antimicrobial Agent with Marked Activity against Bacterial Biofilms. / Jensen, Rune Lyngklip; Folkesson, Anders; Molin, Søren; Stensen, W.; Svendsen, J. S.

    In: Abstracts of the Interscience Conference on Antimicrobial Agents and Chemotherapy, Vol. 49, 2009, p. 189.

    Publication: Research › Conference abstract in journal – Annual report year: 2009

  35. 2000
  36. Published

    Antigen 43 facilitates formation of multispecies biofilms. / Kjærgaard, Kristian; Schembri, Mark; Ramos, C.; Molin, Søren; Klemm, Per.

    In: Environmental Microbiology, Vol. 2, No. 6, 2000, p. 695-702.

    Publication: Research - peer-review › Journal article – Annual report year: 2000

  37. Published

    Complex adaptive systems ecology. / Molin, J.; Molin, Søren.

    In: Advances in Microbial Ecology, Vol. 16, 2000, p. 233-275.

    Publication: Research - peer-review › Journal article – Annual report year: 2000

  38. Published

    Development and dynamics of Pseudomonas sp biofilms. / Tolker-Nielsen, Tim; Brinch, U. C.; Ragas, Paula Cornelia; Andersen, Jens Bo; Jacobsen, C. S.; Molin, Søren.

    In: Journal of Bacteriology, Vol. 182, No. 22, 2000, p. 6482-6489.

    Publication: Research - peer-review › Journal article – Annual report year: 2000

  39. Published

    Inactivation of gltB abolishes expression of the assimilatory nitrate reductase gene (nasB) in Pseudomonas putida KT2442. / Eberl, Leo; Ammendola, A.; Rothballer, M. H.; Givskov, Michael Christian; Sternberg, Claus; Kilstrup, Mogens; Schleifer, K. H.; Molin, Søren.

    In: Journal of Bacteriology, Vol. 182, No. 12, 2000, p. 3368-3376.

    Publication: Research - peer-review › Journal article – Annual report year: 2000

  40. Published

    Microbial communities: aggregates of individuals or coordinated systems. / Molin, Søren; Haagensen, Janus Anders Juul; Barken, Kim Bundvig; Sternberg, Claus.

    In: Community structure and co-operation in biofilms (Eds.: D. G. Allison). Cambridge : Cambridge University Press, 2000. p. 199-214.

    Publication: Research - peer-review › Article in proceedings – Annual report year: 2000

  41. Published

    Role of commensal relationships on the spatial structure of a surface-attached microbial consortium. / Nielsen, Alex Toftgaard; Tolker-Nielsen, Tim; Barken, Kim Bundvig; Molin, Søren.

    In: Environmental Microbiology, Vol. 2, No. 1, 2000, p. 59-68.

    Publication: Research - peer-review › Journal article – Annual report year: 2000

  42. Published

    Spatial organization of microbial biofilm communities. / Tolker-Nielsen, Tim; Molin, Søren.

    In: Microbial Ecology, Vol. 40, No. 2, 2000, p. 75-84.

    Publication: Research - peer-review › Journal article – Annual report year: 2000

  43. 1999
  44. Published

    Active biological containment for bioremediation in the rhizosphere. / Rodriguez, Cayo Juan Ramos; Molina, Lazaro; Ronchel, Maria-Carmen; Ramos, Juan L.; Molin, Søren.

    In: Novel approaches for bioremediation of organic pollution. New York : Plenum Publ., 1999. p. 151-156.

    Publication: Research - peer-review › Article in proceedings – Annual report year: 1999

  45. Published

    Application of molecular tools for in situ monitoring of bacterial growth activity. / Molin, Søren; Givskov, Michael Christian.

    In: Environ. Microbiol., Vol. 1, No. 5, 1999, p. 383-391.

    Publication: Research - peer-review › Journal article – Annual report year: 1999

  46. Published

    Distribution of bacterial growth activity in flow-chamber biofilms. / Sternberg, Claus; Christensen, Bjarke B.; Johansen, Tove; Nielsen, Alex Toftgaard; Andersen, Jens Bo; Givskov, Michael Christian; Molin, Søren.

    In: Applied and Environmental Microbiology, Vol. 65, No. 9, 1999, p. 4108-4117.

    Publication: Research - peer-review › Journal article – Annual report year: 1999

  47. Published

    Identification of a novel group of bacteria in sludge from a deteriorated biological phosphorus removal reactor. / Nielsen, Alex Toftgaard; Liu, Wen-Tso; Filipe, Carlos; Grady, Leslie; Molin, Søren; Stahl, David A.

    In: Applied and Environmental Microbiology, Vol. 65, No. 3, 1999, p. 1251-1258.

    Publication: Research - peer-review › Journal article – Annual report year: 1999

  48. Published

    Microbial activity in biofilm communities. / Molin, Søren.

    In: Dental plaque revisited: oral biofilms in health and disease. Chippenham : Anthony Rowe Ltd., 1999. p. 73-78.

    Publication: Research - peer-review › Article in proceedings – Annual report year: 1999

  49. Published

    Molecular tools for study of biofilm physiology. / Christensen, Bjarke B.; Sternberg, Claus; Andersen, Jens Bo; Palmer, Robert J.; Nielsen, Alex Toftgaard; Givskov, Michael Christian; Molin, Søren.

    In: Methods in Enzymology. Academic Press, 1999. p. 20-42.

    Publication: Research - peer-review › Article in proceedings – Annual report year: 1999

  50. Published

    Monitoring the conjugal transfer of plasmid RP4 in activated sludge and in situ identification of the transconjugants. / Geisenberger, Otto; Ammendola, Aldo; Christensen, Bjarke B.; Molin, Søren; Schleifer, Karl-Heinz; Eberl, Leo.

    In: FEMS Microbiol. Lett., Vol. 174, 1999, p. 9-17.

    Publication: Research - peer-review › Journal article – Annual report year: 1999

  51. Published

    Mucoid conversion of Pseudomonas aeruginosa by hydrogen peroxide: a mechanism for virulence activation in the cystic fibrosis lung. / Mathee, Kalai; Ciofu, Oana; Sternberg, Claus; Lindum, Peter W.; Campbell, Joan I.A.; Jensen, Per; Johnsen, Anders H.; Givskov, Michael Christian; Ohman, Dennis E.; Molin, Søren; Høiby, Niels; Kharazmi, Arsalan.

    In: Microbiology, Vol. 145, 1999, p. 1349-1357.

    Publication: Research - peer-review › Journal article – Annual report year: 1999

  52. Published

    Physiological states of individual Salmonella typhimurium cells monitored by in situ reverse transcription PCR. / Holmstrøm, Kim; Tolker-Nielsen, Tim; Molin, Søren.

    In: J. Bacteriol., Vol. 181, No. 6, 1999, p. 173-178.

    Publication: Research - peer-review › Journal article – Annual report year: 1999

  53. Published

    Quorum sensing and eukaryote-prokaryote interactions. / Givskov, Michael Christian; Andersen, Jens Bo; Hentzer, Morten; Heydorn, Arne; Molin, Søren; Eberl, Leo; DeNys, Rocky; Manefield, Michael; Steinberg, Peter; Kjelleberg, Staffan; Wu, Hong; Song, Zhijun; Høiby, Niels.

    In: Clinical Microbiology and Infection, Vol. 5, 1999, p. 5 S6.

    Publication: Research - peer-review › Journal article – Annual report year: 1999

  54. Published

    Surface motility in Serratia liquefaciens. / Eberl, Leo; Molin, Søren; Givskov, Michael Christian.

    In: Journal of Bacteriology, Vol. 181, 1999, p. 1703-1712.

    Publication: Research - peer-review › Journal article – Annual report year: 1999

  55. 1998
  56. Published

    Biased 16S rDNA PCR amplification caused by interference from DNA flanking the template region. / Hansen, Martin Chr.; Tolker-Nielsen, Tim; Givskov, Michael Christian; Molin, Søren.

    In: FEMS Microbiol. Ecol., Vol. 26, 1998, p. 141-149.

    Publication: Research - peer-review › Journal article – Annual report year: 1998

  57. Published

    Characterization of cell lysis in Pseudomonas putida induced upon expression of heterologous killing genes. / Ronchel, M.C.; Molina, L.; Witte, A.; Lutbiz, W.; Molin, Søren; Ramos, J.L.; Rodriguez, Cayo Juan Ramos.

    In: Applied and Environmental Microbiology, Vol. 64, No. 12, 1998, p. 4904-4911.

    Publication: Research - peer-review › Journal article – Annual report year: 1998

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