Center for Systems Microbiology
- 2013
- Published
Aquaculture application and ecophysiology of marine bacteria from the Roseobacter clade. / D'Alvise, Paul; Gram, Lone (Main supervisor).
Søborg : DTU Food, 2013. 79 p.Publication: Research › Ph.d. thesis – Annual report year: 2013
- Published
Engineering strategies aimed at control of acidification rate of lactic acid bacteria. / Martinussen, Jan; Solem, Christian; Holm, Anders Koefoed; Jensen, Peter Ruhdal.
In: Current Opinion in Biotechnology, Vol. 24, No. 2, 2013, p. 124-129.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Evolutionary remodeling of global regulatory networks during long-term bacterial adaptation to human hosts. / Pedersen, Søren Damkiær; Yang, Lei; Molin, Søren; Jelsbak, Lars.
In: National Academy of Sciences. Proceedings, Vol. 110, No. 19, 2013, p. 7766-7771.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Expression and functional studies of genes involved in transport and metabolism of glycerol in Pachysolen tannophilus.. / Liu, Xiaoying; Mortensen, Uffe Hasbro; Workman, Mhairi.
In: Microbial Cell Factories, Vol. 12, 2013, p. 27.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Genome Sequencing Identifies Two Nearly Unchanged Strains of Persistent Listeria monocytogenes Isolated at Two Different Fish Processing Plants Sampled 6 Years Apart. / Holch, Anne; Webb, Kristen; Lukjancenko, Oksana; Ussery, David; Rosenthal, Benjamin M.; Gram, Lone.
In: Applied and Environmental Microbiology, Vol. 79, No. 9, 2013, p. 2944-2951.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Genotyping using whole-genome sequencing is a realistic alternative to surveillance based on phenotypic antimicrobial susceptibility testing. / Zankari, Ea; Hasman, Henrik; Kaas, Rolf Sommer; Seyfarth, Anne Mette; Agersø, Yvonne; Lund, Ole; Larsen, Mette Voldby; Aarestrup, Frank Møller.
In: Journal of Antimicrobial Chemotherapy, Vol. 68, No. 4, 2013, p. 771-777.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
High beta-Lactamase Levels Change the Pharmacodynamics of beta-Lactam Antibiotics in Pseudomonas aeruginosa Biofilms. / Wang, Hengzhuang; Ciofu, Oana; Yang, Liang; Wu, Hong; Song, Zhijun; Oliver, Antonio; Hoiby, Niels.
In: Antimicrobial Agents and Chemotherapy, Vol. 57, No. 1, 2013, p. 196-204.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
High in vitro antimicrobial activity of β-peptoid-peptide hybrid oligomers against planktonic and biofilm cultures of Staphylococcus epidermidis.. / Liu, Yang; Knapp, Kolja Michael; Yang, Liang; Molin, Søren; Franzyk, Henrik; Folkesson, Anders.
In: International Journal of Antimicrobial Agents, Vol. 41, No. 1, 2013, p. 20-27.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Identification of the Receptor-Binding Protein in Lytic Leuconostoc pseudomesenteroides Bacteriophages. / Kot, Witold Piotr; Hammer, Karin; Neve, Horst; Vogensen, Finn Kvist.
In: Applied and Environmental Microbiology, Vol. 79, No. 10, 2013, p. 203311-3314.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Industrial Systems Biology of Saccharomyces cerevisiae Enables Novel Succinic Acid Cell Factory.. / Otero, José Manuel; Cimini, Donatella; Patil, Kiran Raosaheb; Poulsen, Simon Guldberg; Olsson, Lisbeth; Nielsen, Jens.
In: P L o S One, Vol. 8, No. 1, 2013, p. e54144.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Protection of cod larvae from vibriosis by Phaeobacter spp.: A comparison of strains and introduction times. / D'Alvise, Paul; Lillebø, Siril; Wergeland, Heidrun I.; Gram, Lone; Bergh, Øivind.
In: Aquaculture, Vol. 384-387, 2013, p. 82-86.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Repetitive, Marker-Free, Site-Specific Integration as a Novel Tool for Multiple Chromosomal Integration of DNA. / Petersen, Kia Vest; Martinussen, Jan; Jensen, Peter Ruhdal; Solem, Christian.
In: Applied and Environmental Microbiology, Vol. 79, No. 12, 2013, p. 3563-3569.Publication: Research › Journal article – Annual report year: 2013
- Published
Rewiring Lactococcus lactis for Ethanol Production. / Solem, Christian; Dehli, Tore Ibsen; Jensen, Peter Ruhdal.
In: Applied and Environmental Microbiology, Vol. 79, No. 8, 2013, p. 2512-2518.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Sodium Dodecyl Sulfate (SDS)-Loaded Nanoporous Polymer as Anti-Biofilm Surface Coating Material. / Li, Li; Molin, Søren; Yang, Liang; Ndoni, Sokol.
In: International Journal of Molecular Sciences (Online), Vol. 14, No. 2, 2013, p. 3050-3064.Publication: Research - peer-review › Journal article – Annual report year: 2013
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The Transcriptional and Gene Regulatory Network of Lactococcus lactis MG1363 during Growth in Milk. / de Jong, Anne; Hansen, Morten Ejby; Kuipers, Oscar P.; Kilstrup, Mogens; Kok, Jan.
In: P L o S One, Vol. 8, No. 1, 2013, p. -.Publication: Research - peer-review › Journal article – Annual report year: 2013
- Published
Typing of Pseudomonas aeruginosa from hemorrhagic pneumonia in mink (Neovison vison). / Salomonsen, Charlotte Mark; Themudo, G. E.; Jelsbak, Lars; Molin, Søren; Høiby, N.; Hammer , Anne Sofie .
In: Veterinary Microbiology, Vol. 163, No. 1-2, 2013, p. 103-109.Publication: Research - peer-review › Journal article – Annual report year: 2013
- 2012
- Published
A complex multilevel attack on Pseudomonas aeruginosa algT/U expression and AlgT/U activity results in the loss of alginate production. / Sautter, Robert; Ramos, Damaris; Schneper, Lisa; Ciofu, Oana; Wassermann, Tina; Koh, Chong-Lek; Heydorn, Arne; Hentzer, Morton; Høiby, Niels; Kharazmi, Arsalan; Molin, Søren; DeVries, Caroline A.; Ohman, Dennis E.; Mathee, Kalai.
In: Gene, Vol. 498, No. 2, 2012, p. 242-253.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Adaptation of Pseudomonas aeruginosa to the cystic fibrosis airway: an evolutionary perspective.. / Folkesson, Anders; Jelsbak, Lars; Yang, Lei; Johansen, Helle Krogh; Ciofu, Oana; Høiby, Niels; Molin, Søren.
In: Nature Reviews. Microbiology, Vol. 10, No. 12, 2012.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Aspergillus hydrophobins - Identification, classification and characterization. / Jensen, Britt Guillaume; Nielsen, Kristian Fog (Main supervisor); Søndergaard, Ib (Supervisor); Pedersen, Mona Højgaard (Supervisor); Frisvad, Jens Christian (Supervisor); Jelsbak, Lars (Supervisor); Jacobsen, Susanne (Supervisor).
Department of Systems Biology, DTU, 2012. 212 p.Publication: Research › Ph.d. thesis – Annual report year: 2013
- Published
Bioconversion of crude glycerol feedstocks into ethanol by Pachysolen tannophilus. / Liu, Xiaoying; Jensen, Peter Ruhdal; Workman, Mhairi.
In: Bioresource Technology, Vol. 104, 2012, p. 559-586.Publication: Research - peer-review › Journal article – Annual report year: 2011
- Published
Characterization of the AN6448 cluster in Aspergillus nidulans. / Nielsen, Jakob Blæsbjerg; Klejnstrup, Marie Louise; Khorsand-Jamal, Paiman; Holm, Dorte Koefoed; Nielsen, Michael Lynge; Kabat, Anna Monika; Rank, Christian; Gotfredsen, Charlotte Held; Larsen, T. O.; Mortensen, Uffe Hasbro.
In: Planta Medica, Vol. 78, No. 11, 2012, p. 1113-1113.Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012
- Published
Chitin elicitation of natural product production in marine bacteria. / Månsson, Maria; Wietz, Matthias; Larsen, Thomas Ostenfeld; Gram, Lone.
2012. Abstract from Gordon Conference on Marine Natural Products, Venture, CA, United States.Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2012
- Published
Combating biofilms. / Yang, Liang; Liu, Yang; Wu, Hong; Song, Zhijun; Hoiby, Niels; Molin, Søren; Givskov, Michael.
In: F E M S Immunology and Medical Microbiology, Vol. 65, No. 2, Sp. Iss. SI, 2012, p. 146-157.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Context matters — the complex interplay between resistome genotypes and resistance phenotypes. / Dantas, Gautam; Sommer, Morten.
In: Current Opinion in Microbiology, Vol. 15, No. 5, 2012, p. 577-582.Publication: Research - peer-review › Journal article – Annual report year: 2012
- Published
Deletion and acquisition of genomic content during early stage adaptation of Pseudomonas aeruginosa to a human host environment. / Rau, Martin H.; Marvig, Rasmus Lykke; Ehrlich, Garth D.; Molin, Søren; Jelsbak, Lars.
In: Environmental Microbiology, Vol. 14, No. 8, 2012, p. 2200-2211.Publication: Research - peer-review › Journal article – Annual report year: 2012