Center for Systems Microbiology

  1. 2013
  2. Published

    ClpP deletion causes attenuation of Salmonella Typhimurium virulence through mis-regulation of RpoS and indirect control of CsrA and the SPI genes. / Knudsen, Gitte Maegaard; Olsen, John E.; Aabo, Søren; Barrow, Paul; Rychlik, Ivan; Thomsen, Line E.

    In: Microbiology, Vol. 159, No. Part 7, 2013, p. 1497-1509.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  3. Published

    Comparative Genomic Analysis of Rapid Evolution of an Extreme-Drug-Resistant Acinetobacter baumannii Clone. / Tan, Sean Yang-Yi; Chua, Song Lin; Liu, Yang; Høiby, Niels; Andersen, Leif Percival; Givskov, Michael Christian; Song, Zhijun; Yang, Liang.

    In: Genome Biology and Evolution, Vol. 5, No. 5, 2013, p. 807-818.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  4. Published

    Détection et quantification de Morganella psychrotolerans dans des poissons par qPCR.. / Podeur, G.; Leroi, F.; Prevost, H.; Pilet, M. F.; Dalgaard, Paw; Emborg, J.; Martinussen, Jan; Hansen, L.

    2013. Abstract from 9e Congrès Nationale de la Société Francaise de Microbiologie, Lille, France.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2013

  5. Published

    Discovering Unique, Low-Energy Transition States Using Evolutionary Molecular Memetic Computing. / Ellabaan, Mostafa M Hashim; Ong, Y.S.; Handoko, S.D.; Kwoh, C.K.; Man, H.Y.

    In: I E E E Computational Intelligence Magazine, Vol. 8, No. 3, 2013, p. 54-63.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  6. Published
  7. Published
  8. Published
  9. Published
  10. Published

    High beta-Lactamase Levels Change the Pharmacodynamics of beta-Lactam Antibiotics in Pseudomonas aeruginosa Biofilms. / Wang, Hengzhuang; Ciofu, Oana; Yang, Liang; Wu, Hong; Song, Zhijun; Oliver, Antonio; Hoiby, Niels.

    In: Antimicrobial Agents and Chemotherapy, Vol. 57, No. 1, 2013, p. 196-204.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  11. Published
  12. Published

    Identification of the Receptor-Binding Protein in Lytic Leuconostoc pseudomesenteroides Bacteriophages. / Kot, Witold Piotr; Hammer, Karin; Neve, Horst; Vogensen, Finn Kvist.

    In: Applied and Environmental Microbiology, Vol. 79, No. 10, 2013, p. 203311-3314.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  13. Published

    Industrial Systems Biology of Saccharomyces cerevisiae Enables Novel Succinic Acid Cell Factory.. / Otero, José Manuel; Cimini, Donatella; Patil, Kiran Raosaheb; Poulsen, Simon Guldberg; Olsson, Lisbeth; Nielsen, Jens.

    In: P L o S One, Vol. 8, No. 1, e54144, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  14. Published

    Investigation of the Relationship between Lactococcal Host Cell Wall Polysaccharide Genotype and 936 Phage Receptor Binding Protein Phylogeny. / Mahony, Jennifer; Kot, Witold Piotr; Murphy, James; Ainsworth, Stuart; Neve, Horst; Hansen, Lars H.; Heller, Knut J.; Sørensen, Søren; Hammer, Karin; Cambillau, Christian; Vogensen, Finn Kvist; van Sinderen, Douwe.

    In: Applied and Environmental Microbiology, Vol. 79, No. 14, 2013, p. 204385-4392.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  15. Published

    Protection of cod larvae from vibriosis by Phaeobacter spp.: A comparison of strains and introduction times. / D'Alvise, Paul; Lillebø, Siril; Wergeland, Heidrun I.; Gram, Lone; Bergh, Øivind.

    In: Aquaculture, Vol. 384-387, 2013, p. 82-86.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  16. Published
  17. Published

    Rewiring Lactococcus lactis for Ethanol Production. / Solem, Christian; Dehli, Tore Ibsen; Jensen, Peter Ruhdal.

    In: Applied and Environmental Microbiology, Vol. 79, No. 8, 2013, p. 2512-2518.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  18. Published
  19. Published

    The putative thiosulfate sulfurtransferases PspE and GlpE contribute to virulence of Salmonella Typhimurium in the mouse model of systemic disease.. / Wallrodt, Inke; Jelsbak, Lotte; Thorndahl, Lotte; Thomsen, Line Elnif; Lemire, Sebastien; Olsen, John E.

    In: PLoS ONE, Vol. 8, No. 8, e70829, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  20. Published

    The Transcriptional and Gene Regulatory Network of Lactococcus lactis MG1363 during Growth in Milk. / de Jong, Anne; Hansen, Morten Ejby; Kuipers, Oscar P.; Kilstrup, Mogens; Kok, Jan.

    In: P L o S One, Vol. 8, No. 1, 2013, p. -.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  21. Published

    Typing of Pseudomonas aeruginosa from hemorrhagic pneumonia in mink (Neovison vison). / Salomonsen, Charlotte Mark; Themudo, G. E.; Jelsbak, Lars; Molin, Søren; Høiby, N.; Hammer , Anne Sofie .

    In: Veterinary Microbiology, Vol. 163, No. 1-2, 2013, p. 103-109.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  22. 2012
  23. Published

    A complex multilevel attack on Pseudomonas aeruginosa algT/U expression and AlgT/U activity results in the loss of alginate production. / Sautter, Robert; Ramos, Damaris; Schneper, Lisa; Ciofu, Oana; Wassermann, Tina; Koh, Chong-Lek; Heydorn, Arne; Hentzer, Morton; Høiby, Niels; Kharazmi, Arsalan; Molin, Søren; DeVries, Caroline A.; Ohman, Dennis E.; Mathee, Kalai.

    In: Gene, Vol. 498, No. 2, 2012, p. 242-253.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  24. Published

    Adaptation of Pseudomonas aeruginosa to the cystic fibrosis airway: an evolutionary perspective.. / Folkesson, Anders; Jelsbak, Lars; Yang, Lei; Johansen, Helle Krogh; Ciofu, Oana; Høiby, Niels; Molin, Søren.

    In: Nature Reviews. Microbiology, Vol. 10, No. 12, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  25. Published
  26. Published

    Bioconversion of crude glycerol feedstocks into ethanol by Pachysolen tannophilus. / Liu, Xiaoying; Jensen, Peter Ruhdal; Workman, Mhairi.

    In: Bioresource Technology, Vol. 104, 2012, p. 559-586.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  27. Published
  28. Published

    Chitin elicitation of natural product production in marine bacteria. / Månsson, Maria; Wietz, Matthias; Larsen, Thomas Ostenfeld; Gram, Lone.

    2012. Abstract from Gordon Conference on Marine Natural Products, Venture, CA, United States.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2012

  29. Published

    Combating biofilms. / Yang, Liang; Liu, Yang; Wu, Hong; Song, Zhijun; Hoiby, Niels; Molin, Søren; Givskov, Michael.

    In: F E M S Immunology and Medical Microbiology, Vol. 65, No. 2, Sp. Iss. SI, 2012, p. 146-157.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  30. Published

    Context matters — the complex interplay between resistome genotypes and resistance phenotypes. / Dantas, Gautam; Sommer, Morten.

    In: Current Opinion in Microbiology, Vol. 15, No. 5, 2012, p. 577-582.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  31. Published

    Deletion and acquisition of genomic content during early stage adaptation of Pseudomonas aeruginosa to a human host environment. / Rau, Martin H.; Marvig, Rasmus Lykke; Ehrlich, Garth D.; Molin, Søren; Jelsbak, Lars.

    In: Environmental Microbiology, Vol. 14, No. 8, 2012, p. 2200-2211.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  32. Published

    Draft Genome Sequence of the Yeast Pachysolen tannophilus CBS 4044/NRRL Y-2460. / Liu, Xiaoying ; Kaas, Rolf Sommer; Jensen, Peter Ruhdal; Workman, Mhairi.

    In: Eukaryotic Cell (Online Edition), Vol. 11, No. 6, 2012, p. 827.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  33. Published

    Early genetic adaptation associated with chronic pseudomonas aeruginosa airways infection. / Johansen, H. K.; Aanaes, K.; Pressler, Tacjana; Skov, M.; Nielsen, K. G.; Ciofu, Oana; Buchwald, C.; Hoiby, N.; Molin, Søren.

    In: Pediatric Pulmonology, Vol. 47, No. S35, 2012, p. 328-329.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  34. Published

    Establishing new microbial cell factories for sustainable bioprocesses. / Workman, Mhairi; Holt, Philippe; Liu, Xiaoying .

    In: New Biotechnology, Vol. 29S, 2012, p. S75.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  35. Published
  36. Published
  37. Published
  38. Published

    Evolution and diversification of Pseudomonas aeruginosa in the paranasal sinuses of cystic fibrosis children have implications for chronic lung infection. / Hansen, Susse Kirkelund; Rau, Martin Holm; Johansen, Helle Krogh; Ciofu, Oana; Jelsbak, Lars; Yang, Lei; Folkesson, Anders; Jarmer, Hanne Østergaard; Aanæs, Kasper; von Buchwald, Christian; Høiby, Niels; Molin, Søren.

    In: I S M E Journal, Vol. 6, No. 1, 2012, p. 31.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  39. Published

    Evolutionary dynamics of pseudomonas aeruginosa in CF. / Molin, Soren; Jelsbak, Lars; Johansen, Helle; Hoiby, Niels.

    In: Pediatric Pulmonology, Vol. 47, 2012, p. 152-153.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  40. Published

    Genome‐wide identification of novel small RNAs in Pseudomonas aeruginosa. / Gómez Lozano, María; Marvig, Rasmus Lykke; Molin, Søren; Long, Katherine.

    In: Environmental Microbiology, Vol. 14, No. 8, 2012, p. 2006-2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  41. Published

    Hemorrhagic pneumonia in mink caused by Pseudomonas aeruginosa. / Salomonsen, Charlotte Mark; Boye, Mette (Main supervisor); Høiby, Niels (Supervisor); Molin, Søren (Supervisor).

    Kgs. Lyngby : Technical University of Denmark, 2012. 105 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2013

  42. Published

    Identification of Genes Important for Growth of Asymptomatic Bacteriuria Escherichia coli in Urine. / Vejborg, Rebecca Munk; de Evgrafov, Mari Cristina Rodriguez; Phan, Minh Duy; Totsika, Makrina; Schembri, Mark; Hancock, Viktoria .

    In: Infection and Immunity, Vol. 80, No. 9, 2012, p. 3179-3188.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  43. Published

    Initial Pseudomonas aeruginosa infection in patients with cystic fibrosis: characteristics of eradicated and persistent isolates. / Tramper-Stranders, G. A.; van der Ent, C. K.; Molin, Søren; Yang, Liang; Hansen, Susse Kirkelund; Rau, Martin Holm; Ciofu, Oana; Johansen, H. K.; Wolfs, T. F. W.

    In: Clinical Microbiology and Infection, Vol. 18, No. 6, 2012, p. 567-574.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  44. Published
  45. Published
  46. Published

    Mutations in 23S rRNA Confer Resistance against Azithromycin in Pseudomonas aeruginosa. / Marvig, Rasmus Lykke; Søndergaard, Mette S. R.; Pedersen, Søren Damkiær; Høiby, Niels; Johansen, Helle Krogh; Molin, Søren; Jelsbak, Lars.

    In: Antimicrobial Agents and Chemotherapy, Vol. 56, No. 8, 2012, p. 4519-4521.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  47. Published

    Overnight Control of Blood Glucose in People with Type 1 Diabetes. / Boiroux, Dimitri; Duun-Henriksen, Anne Katrine; Schmidt, Signe; Nørgaard, Kirsten; Madsbad, Sten; Skyggebjerg, Ole; Jensen, Peter Ruhdal; Poulsen, Niels Kjølstad; Madsen, Henrik; Jørgensen, John Bagterp.

    Biological and Medical Systems. Vol. 8 2012. p. 73-78 (IFAC Proceedings Volumes (IFAC-PapersOnline) ).

    Publication: Research - peer-reviewArticle in proceedings – Annual report year: 2012

  48. Published

    Physiological characterisation of Yarrowia lipolytica yields new features of the strain. / Holt, Philippe; Thykær, Jette; Workman, Mhairi.

    In: New Biotechnology, Vol. 29S, 2012, p. S212.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  49. Published

    Physiological heterogeneities in microbial populations and implications for physical stress tolerance. / Carlquist, Magnus; Fernandes, Rita Lencastre; Helmark, Søren; Heins, Anna-Lena; Lundin, Luisa; Sorensen, Søren J.; Gernaey, Krist ; Eliasson Lantz, Anna.

    In: Microbial Cell Factories, Vol. 11, No. 94, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  50. Published

    Polyamines Are Required for Virulence in Salmonella enterica Serovar Typhimurium. / Jelsbak, Lotte; Thomsen, Line Elnif; Wallrodt, Inke; Jensen, Peter Ruhdal; Olsen, John Elmerdahl.

    In: P L o S One, Vol. 7, No. 4, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  51. Published

    Polysaccharides serve as scaffold of biofilms formed by mucoid Pseudomonas aeruginosa.. / Yang, Liang; Hengzhuang, Wang; Wu, Hong; Pedersen, Søren Damkiær; Jochumsen, Nicholas; Song, Zhijun; Givskov, Michael Christian; Høiby, Niels; Molin, Søren.

    In: F E M S Immunology and Medical Microbiology, Vol. 65, No. 2, 2012, p. 366-376.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  52. Published

    Saccharomyces cerevisiae : a model to uncover molecular mechanisms for yeast biofilm biology.. / Bojsen, Rasmus K; Andersen, Kaj Scherz; Regenberg, Birgitte.

    In: F E M S Immunology and Medical Microbiology, Vol. 65, No. 2, 2012, p. 169-182.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  53. Published

    SarA is a negative regulator of Staphylococcus epidermidis biofilm formation. / Martin, Christer; Heinze, C.; Busch, M.; Franke, G.; Hentschke, M.; Dühring, Sara Bayard; Buettner, H.; Kotasinska, M.; Wischnewski, V.; Buck, F.; Molin, Søren; Otto, Michael; Rohde, Henning.

    In: International Journal of Medical Microbiology, Vol. 302, 2012.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  54. Published

    sarA negatively regulates Staphylococcus epidermidis biofilm formation by modulating expression of 1 MDa extracellular matrix binding protein and autolysis‐dependent release of eDNA. / Christner, Martin; Heinze, Constanze; Busch, Michael; Franke, Gefion; Hentschke, Moritz; Dühring, Sara Bayard; Büttner, Henning; Kotasinska, Marta; Wischnewski, Victoria; Kroll, Gesche; Buck, Friedrich; Molin, Søren; Otto, Michael; Rohde, Holger.

    In: Molecular Microbiology, Vol. 86, No. 2, 2012, p. 394-410.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  55. Published
  56. Published

    Staphylococcus epidermidis recovered from indwelling catheters exhibit enhanced biofilm dispersal and "self-renewal" through downregulation of agr. / Dai, Lu; Yang, Liang; Parsons, Chris; Findlay, Victoria J.; Molin, Søren; Qin, Zhiqiang.

    In: B M C Microbiology, Vol. 12, 2012, p. Article No.: 102.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  57. Published
  58. Published

    The Shared Antibiotic Resistome of Soil Bacteria and Human Pathogens. / Forsberg, Kevin J.; Reyes, Alejandro; Wang, Bin; Selleck, Elizabeth M.; Sommer, Morten O. A.; Dantas, Gautam.

    In: Science, Vol. 337, No. 6098, 2012, p. 1107-1111.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  59. Published

    Tunable promoters in synthetic and systems biology.. / Dehli, Tore; Solem, Christian; Jensen, Peter Ruhdal.

    In: Sub-cellular biochemistry., Vol. 64, 2012, p. 181-201.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  60. Published

    Tuning of Controller for Type 1 Diabetes Treatment with Stochastic Differential Equations. / Duun-Henriksen, Anne Katrine; Boiroux, Dimitri; Schmidt, Signe; Skyggebjerg, Ole; Madsbad, Sten; Jensen, Peter Ruhdal; Jørgensen, John Bagterp; Poulsen, Niels Kjølstad; Nørgaard, Kirsten; Madsen, Henrik.

    Biological and Medical Systems. Vol. 8 2012. p. 46-51 (IFAC Proceedings Volumes (IFAC-PapersOnline) ).

    Publication: Research - peer-reviewArticle in proceedings – Annual report year: 2012

  61. 2011
  62. Published

    Characterization of the molecular and genetic regulation of the nucleotide metabolism in Lactococcus lactis. / Jendresen, Christian Bille; Kilstrup, Mogens (Supervisor); Martinussen, Jan (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2011.

    Publication: ResearchPh.D. thesis – Annual report year: 2011

  63. Published

    Adhesive properties of Staphylococcus epidermidis probed by atomic force microscopy. / Hu, Yifan; Ulstrup, Jens; Zhang, Jingdong; Molin, Søren; Dupres, Vincent.

    In: Physical Chemistry Chemical Physics, Vol. 13, No. 21, 2011, p. 9995-10003.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  64. Published

    Advanced Microscopy of Microbial Cells. / Haagensen, Janus Anders Juul; Regenberg, Birgitte; Sternberg, Claus.

    Advances in Biochemical Engineering/Biotechnology. Vol. 124 Springer, 2011. p. 21-54 (Advances in Biochemical Engineering/Biotechnology).

    Publication: Research - peer-reviewBook chapter – Annual report year: 2011

  65. Published

    A Mig-14-like protein (PA5003) affects antimicrobial peptide recognition in Pseudomonas aeruginosa. / Jochumsen, Nicholas; Liu, Yang; Molin, Søren; Folkesson, Anders.

    In: Microbiology, Vol. 157, No. Pt 9, 2011, p. 2647-2657.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  66. Published
  67. Published

    Antibiotics and the resistant microbiome. / Sommer, Morten; Dantas, Gautam.

    In: Current Opinion in Microbiology, Vol. 14, No. 5, 2011, p. 556-563.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  68. Published
  69. Published

    Aspergillus triggers phenazine production in Pseudomonas aeruginosa. / Jensen, Britt Guillaume; Jelsbak, Lars; Søndergaard, Ib; Pedersen, Mona Højgaard; Frisvad, Jens Christian; Nielsen, Kristian Fog.

    2011. Abstract from European Congress on Microbial Biofilms – Basic and Clinical Aspects, Copenhagen, Denmark, .

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2011

  70. Published

    Bacillus subtilis Two-Component System Sensory Kinase DegS Is Regulated by Serine Phosphorylation in Its Input Domain. / Jers, Carsten; Kobir, Ahasanul; Søndergaard, Elsebeth Oline; Jensen, Peter Ruhdal; Mijakovic, Ivan.

    In: P L o S One, Vol. 6, No. 2, 2011, p. e14653.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  71. Published
  72. Published

    Current understanding of multi-species biofilms. / Yang, Liang; Liu, Yang; Wu, Hong; Høiby, Niels; Molin, Søren; Song, Zhi-jun.

    In: International Journal of Oral Science, Vol. 3, No. 2, 2011, p. 74-81.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  73. Published
  74. Published

    Dynamics of Mutator and Antibiotic-Resistant Populations in a Pharmacokinetic/Pharmacodynamic Model of Pseudomonas aeruginosa Biofilm Treatment. / Macià, María D.; Pérez, José L.; Molin, Søren; Oliver, Antonio.

    In: Antimicrobial Agents and Chemotherapy, Vol. 55, No. 11, 2011, p. 5230-5237.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  75. Published

    Effects of ginseng on Pseudomonas aeruginosa motility and biofilm formation. / Wu, Hong; Lee, Baoleri; Yang, Liang; Wang, Hengzuang; Givskov, Michael Christian; Molin, Søren; Høiby, Niels; Song, Zhijun.

    In: F E M S Immunology and Medical Microbiology, Vol. 62, No. 1, 2011, p. 49-56.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  76. Published

    Erratum: Pattern differentiation in co-culture biofilms formed by Staphylococcus aureus and Pseudomonas aeruginosa. / Yang, Liang; Liu, Yang; Markussen, Trine; Høiby, Niels; Tolker-Nielsen, Tim; Molin, Søren.

    In: F E M S Immunology and Medical Microbiology, Vol. 63, No. 1, 2011, p. 151-151.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  77. Published

    Evolution and Adaptation in Pseudomonas aeruginosa Biofilms Driven by Mismatch Repair System-Deficient Mutators. / Luján, Adela M.; Maciá, María D.; Yang, Liang; Molin, Søren; Oliver, Antonio; Smania, Andrea M.

    In: P L o S One, Vol. 6, No. 11, 2011, p. e27842.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  78. Published
  79. Published
  80. Published

    ”Good teaching practice” at DTU Systems Biology - sustaining quality in teaching and learning. / Kilstrup, Mogens; Hellgren, Lars; Andersson, Pernille Hammar.

    7th International CDIO Conference 2011. Technical University of Denmark, 2011.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2011

  81. Published

    Growing and Analyzing Biofilms in Flow Chambers. / Tolker-Nielsen, Tim; Sternberg, Claus.

    Current Protocols in Microbiology. Vol. 1B.2 John Wiley & Sons Ltd, 2011.

    Publication: Research - peer-reviewBook chapter – Annual report year: 2011

  82. Published

    Key Players in the Genetic Switch of Bacteriophage TP901-1. / Alsing, Anne; Pedersen, Margit; Sneppen, Kim; Hammer, Karin.

    In: Biophysical Journal, Vol. 100, No. 2, 2011, p. 313-321.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  83. Published

    Microbial ecology and adaptation in cystic fibrosis airways. / Yang, Lei; Jelsbak, Lars; Molin, Søren.

    In: Environmental Microbiology, Vol. 13, No. 7, 2011, p. 1682-1689.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  84. Published

    Mucoid Pseudomonas aeruginosa isolates maintain the biofilm formation capacity and the gene expression profiles during the chronic lung infection of CF patients. / Lee, Bao le ri; Schjerling, Charlotte K.; Kirkby, Nikolai; Hoffmann, Nadine; Borup, Rehannah; Molin, Søren; Høiby, Niels; Ciofu, Oana.

    In: A P M I S. Acta Pathologica, Microbiologica et Immunologica Scandinavica, Vol. 119, No. 4-5, 2011, p. 263-274.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  85. Published

    Nucleotide Metabolism. / Martinussen, Jan; Willemoës, M.; Kilstrup, Mogens.

    Comprehensive Biotechnology. ed. / Murray Moo-Young. Vol. 1 2. ed. Elsevier Science, 2011. p. 91-107.

    Publication: Research - peer-reviewBook chapter – Annual report year: 2011

  86. Published

    Pattern differentiation in co-culture biofilms formed by Staphylococcus aureus and Pseudomonas aeruginosa. / EFSA Publication ; Liu, Yang; Markussen, Trine; Høiby, Niels; Tolker-Nielsen, Tim; Molin, Søren.

    In: F E M S Immunology and Medical Microbiology, Vol. 62, No. 3, 2011, p. 339-347.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  87. Published

    Phenotypes of Non-Attached Pseudomonas aeruginosa Aggregates Resemble Surface Attached Biofilm. / Alhede, Morten; Kragh, Kasper Nørskov; Qvortrup, Klaus; Allesen-Holm, Marie; van Gennip, Maria; Christensen, Louise D.; Jensen, Peter Østrup; Nielsen, Anne K.; Parsek, Matt; Wozniak, Dan; Molin, Søren; Tolker-Nielsen, Tim; Høiby, Niels; Givskov, Michael; Bjarnsholt, Thomas.

    In: P L o S One, Vol. 6, No. 11, 2011, p. e27943.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  88. Published
  89. Published

    Quantification of specific E. coli in gut mucosa from Crohn's disease patients. / Jensen, Stina Rikke; Fink, Lisbeth Nielsen; Struve, Carsten; Sternberg, Claus; Andersen, Jens Bo; Brynskov, Jørn; Nielsen, Ole Haagen; Pedersen, Susanne Brix.

    In: Journal of Microbiological Methods, Vol. 86, No. 1, 2011, p. 111-114.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  90. Published

    Selection of hyperadherent mutants in Pseudomonas putida biofilms. / Yousef-Coronado, Fatima; Soriano, María Isabel; Yang, Liang; Molin, Søren; Espinosa-Urgel, Manuel.

    In: Microbiology, Vol. 157, No. Pt 8, 2011, p. 2257-2265.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  91. Published

    Suppression of Aspergillus by Pseudomonas aeruginosa. / Jensen, Britt Guillaume; Jelsbak, Lars; Søndergaard, Ib; Frisvad, Jens Christian; Nielsen, Kristian Fog.

    2011. Abstract from Biofilms in Nosocomial Fungal Infections, Paris, France, .

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2011

  92. Published

    The construction of a library of synthetic promoters revealed some specific features of strong Streptomyces promoters. / Seghezzi, Nicolas; Amar, Patrick; Købmann, Brian; Jensen, Peter Ruhdal; Virolle, Marie-Joëlle.

    In: Applied Microbiology and Biotechnology, Vol. 90, No. 2, 2011, p. 615-623.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  93. Published

    Towards a quantitative prediction of the fluxome from the proteome. / Rossell, Sergio; Solem, Christian; Jensen, Peter Ruhdal; Heijnen, Joseph J.

    In: Metabolic Engineering, Vol. 13, No. 3, 2011, p. 253-262.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  94. 2010
  95. Published

    Protein-Tyrosine Phosphorylation in Bacillus Subtilis Signal Transduction. / Jers, Carsten; Mijakovic, Ivan (Supervisor); Jensen, Peter Ruhdal (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010.

    Publication: ResearchPh.D. thesis – Annual report year: 2010

  96. Published

    Functional Genetic Mapping of Pheudomonas Aeruginosa from Cystic Fibrosis Lungs. / Yang, Lei; Molin, Søren (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010.

    Publication: ResearchPh.D. thesis – Annual report year: 2010

  97. Published

    A dual role of extracellular DNA during biofilm formation of Neisseria meningitidis. / Lappann, M.; Claus, H.; van Alen, T.; Harmsen, Morten; Elias, J.; Molin, Søren; Vogel, U.

    In: Molecular Microbiology, Vol. 75, No. 6, 2010, p. 1355-1371.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  98. Published

    An in vitro model of bacterial infections in wounds and other soft tissues. / Werthen, M.; Henriksson, L.; Jensen, P.O.; Sternberg, Claus; Givskov, M.; Bjarnsholt, T.

    In: Acta Pathologica Microbiologica et Immunologica Scandinavica, Vol. 118, No. 2, 2010, p. 156-164.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  99. Published

    Antibiotic resistance of bacterial biofilms. / Hoiby, N.; Bjarnsholt, T.; Givskov, M.; Molin, Søren; Ciofu, O.

    In: International Journal of Antimicrobial Agents, Vol. 35, No. 4, 2010, p. 322-332.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  100. Published

    Antimicrobial and antistaphylococcal biofilm activity from the sea urchin Paracentrotus lividus. / Schillaci, D.; Arizza, V.; Parrinello, N.; Di Stefano, V.; Fanara, S.; Muccilli, V.; Cunsolo, V.; Haagensen, Janus Anders Juul; Molin, Søren.

    In: Journal of Applied Microbiology, Vol. 108, No. 1, 2010, p. 17-24.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  101. Published
  102. Published

    A sensor kinase recognizing the cell-cell signal BDSF (cis-2-dodecenoic acid) regulates virulence in Burkholderia cenocepacia. / McCarthy, Y.; Yang, Liang; Twomey, K.B.; Sass, A.; Tolker-Nielsen, T.; Mahenthiralingam, E.; Dow, J.M.; Ryan, R.P.

    In: Molecular Microbiology, Vol. 77, No. 5, 2010, p. 1220-1236.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  103. Published

    Bacillus subtilis BY-kinase PtkA controls enzyme activity and localization of its protein substrates. / Jers, Carsten; Pedersen, Malene Mejer; Paspaliari, Dafni Katerina; Schutz, W.; Johnsson, Christina; Soufi, Boumediene; Macek, B.; Jensen, Peter Ruhdal; Mijakovic, Ivan.

    In: Molecular Microbiology, Vol. 77, No. 2, 2010, p. 287-299.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  104. Published

    Characterization of starvation-induced dispersion in Pseudomonas putida biofilms: genetic elements and molecular mechanisms. / Gjermansen, M.; Nilsson, M.; Yang, Liang; Tolker-Nielsen, T.

    In: Molecular Microbiology, Vol. 75, No. 4, 2010, p. 815-826.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

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