Center for Microbial Biotechnology

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  1. 2013
  2. Published

    Accurate prediction of secondary metabolite gene clusters in filamentous fungi.. / Andersen, Mikael Rørdam; Nielsen, Jakob Blæsbjerg; Klitgaard, Andreas; Petersen, Lene Maj; Zachariasen, Mia; Hansen, Tilde J; Holberg Blicher, Lene; Gotfredsen, Charlotte Held; Larsen, Thomas Ostenfeld; Nielsen, Kristian Fog; Mortensen, Uffe Hasbro.

    In: National Academy of Sciences. Proceedings, Vol. 110, No. 1, 2013, p. E99-E107.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  3. Published

    Applying mechanistic models in bioprocess development.. / Lencastre Fernandes, Rita; Bodla, Vijaya Krishna; Carlquist, Magnus; Heins, Anna-Lena; Eliasson Lantz, Anna; Sin, Gürkan; Gernaey, Krist V.

    In: Advances in Biochemical Engineering/Biotechnology . Springer, 2013. p. 137–166 (Advances in Biochemical Engineering. Biotechnology, Vol. 132).

    Publication: Research - peer-review › Book chapter – Annual report year: 2013

  4. Accepted

    Bacillus amyloliquefaciens ssp. plantarum strains as potential protective starter cultures for the production of Bikalga, an alkaline fermented food. / Compaor, C.S.; Nielsen, D.S.; Sawadogo-Lingani, H.; Berner, T.S.; Nielsen, Kristian Fog; Adimpong, David Bichala; Diawara, B.; Ouedraogo, G.A.; Jakobsen, M.; Thorsen, L.

    In: Journal of Applied Microbiology, 2013.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  5. Published

    Cell mass and cell cycle dynamics of an asynchronous budding yeast population : Experimental observations, flow cytometry data analysis, and multi-scale modeling. / Lencastre Fernandes, Rita; Carlquist, Magnus; Lundin, Luisa; Heins, Anna-Lena; Dutta, Abhishek; Sørensen, Søren J.; Jensen, Anker Degn; Nopens, Ingmar; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Biotechnology and Bioengineering (Print), Vol. 110, No. 3, 2013, p. 812-826.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  6. Published

    Characterization of microbial communities and fungal metabolites on field grown strawberries from organic and conventional production. / Jensen, Birgit; Knudsen, Inge M.B.; Andersen, Birgitte; Nielsen, Kristian Fog; Thrane, Ulf; Jensen, Dan Funck; Larsen, John.

    In: International Journal of Food Microbiology, Vol. 160, No. 3, 2013, p. 313-322.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  7. Published

    Co-production of surfactin and a novel bacteriocin by Bacillus subtilis subsp. subtilis H4 isolated from bikalga, an African alkaline Hibiscus sabdariffa seed fermented condiment.. / Compaore, C. S.; Nielsen, Dennis S.; Ouoba, L. I. I.; Berner, Torben Sune; Nielsen, Kristian Fog; Sawadogo-Lingani, H.; Diawara, B.; Ouedraogo, G. A.; Jakobsen, Mogens; Thorsen, Line.

    In: International Journal of Food Microbiology, Vol. 162, No. 3, 2013, p. 297-307.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  8. Published

    Expression and functional studies of genes involved in transport and metabolism of glycerol in Pachysolen tannophilus.. / Liu, Xiaoying; Mortensen, Uffe Hasbro; Workman, Mhairi.

    In: Microbial Cell Factories, Vol. 12, 2013, p. 27.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  9. Published

    Multilocus phylogeny and MALDI-TOF analysis of the plant pathogenic species Alternaria dauci and relatives. / Brun, Sophie; Madrid, Hugo; Gerrits Van Den Ende, Bert; Andersen, Birgitte; Marinach-Patrice, Carine; Mazier, Dominique; De Hoog, G. Sybren.

    In: Fungal Biology, Vol. 117, No. 1, 2013, p. 32-40.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  10. Published

    Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin for a clade comprising all agriculturally and medically important fusaria. / O’Donnell, Kerry; Rooney, Alejandro P.; Proctor, Robert H.; Brown, Daren W.; McCormick, Susan P.; Ward, Todd J.; Frandsen, Rasmus John Normand; Lysøe, Erik; Rehner, Stephen A.; Aoki, Takayuki; Robert, Vincent A.R.G.; Crous, Pedro W.; Groenewald, Johannes Z.; Kang, Seogchan; Geiser, David M.

    In: Fungal Genetics and Biology, Vol. 52, 2013, p. 20-31.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  11. Published

    Phylogenetic relationships among members of the Fusarium solani species complex in human infections and the descriptions of F. keratoplasticum sp. nov. and F. petroliphilum stat. nov.. / Short, Dylan P.G.; O’Donnell, Kerry; Thrane, Ulf; Nielsen, Kristian Fog; Zhang, Ning; Juba, Jean H.; Geiser, David M.

    In: Fungal Genetics and Biology, Vol. 53, 2013, p. 59-70.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  12. Published

    Production of fusarielins by Fusarium. / Sørensen, Jens Laurids; Akk, Elina; Thrane, Ulf; Giese, Henriette; Sondergaard, Teis Esben.

    In: International Journal of Food Microbiology, Vol. 160, No. 3, 2013, p. 206-211.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  13. Published

    Screening the Biosphere: The Fungicolous Fungus Trichoderma phellinicola, a Prolific Source of Hypophellins, New 17-, 18-, 19-, and 20-Residue Peptaibiotics. / Röhrich, Christian René ; Iversen, Anita; Jaklitsch, Walter Michael; Voglmayr, Hermann; Vilcinskas, Andreas; Nielsen, Kristian Fog; Thrane, Ulf; Döhren, Hans von ; Brückner, Hans; Degenkolb, Thomas.

    In: Chemistry & Biodiversity, Vol. 10, 2013, p. 787-812.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  14. Published

    The biodiversity of Aspergillus section Flavi in brazil nuts: From rainforest to consumer. / Calderari, Thaiane O.; Iamanaka, Beatriz T.; Frisvad, Jens Christian; Pitt, John I.; Sartori, Daniele; Pereira, Jose Luiz; Fungaro, Maria Helena P.; Taniwaki, Marta H.

    In: International Journal of Food Microbiology, Vol. 160, No. 3, 2013, p. 267-272.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  15. Published

    Two new Penicillium species Penicillium buchwaldii and Penicillium spathulatum, producing the anticancer compound asperphenamate.. / Frisvad, Jens Christian; Houbraken, Jos; Popma, Suuske; Samson, Robert A.

    In: F E M S Microbiology Letters, Vol. 339, No. 2, 2013, p. 77-92.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  16. 2012
  17. Published

    Microbial isoprenoid production. / Carlsen, Simon; Kielland-Brandt, Morten (Supervisor); Eliasson Lantz, Anna (Supervisor); Nielsen, Michael Lynge (Supervisor).

    Department of Systems Biology, DTU, 2012. 263 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2013

  18. Published

    Mapping of secondary metabolites to their synthase genes in Aspergillus species. / Klejnstrup, Marie Louise; Larsen, Thomas Ostenfeld (Main supervisor); Gotfredsen, Charlotte Held (Supervisor); Mortensen, Uffe Hasbro (Supervisor).

    Department of Systems Biology, DTU, 2012. 306 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2013

  19. Published

    Investigating genotype-phenotype relationships in Saccharomyces cerevisiae metabolic network through stoichiometric modeling. / Brochado, Ana Rita; Mortensen, Uffe Hasbro (Supervisor); Patil, Kiran Raosaheb (Supervisor).

    Department of Systems Biology, DTU, 2012. 165 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2013

  20. Published

    Active Match Load Circuit Intended for Testing Piezoelectric Transformers. / Andersen, Thomas; Rødgaard, Martin Schøler; Andersen, Michael A. E.

    In: 6th IET International Conference on Power Electronics, Machines and Drives. 2012.

    Publication: Research - peer-review › Article in proceedings – Annual report year: 2012

  21. Published

    Adaptive evolution of drug targets in producer and non-producer organisms. / Hansen, Bjarne Gram; Sun, Xin E.; Genee, Hans Jasper; Kaas, Christian Schrøder; Nielsen, Jakob Blæsbjerg; Frisvad, Jens Christian; Hedstrom, Lizbeth.

    In: Biochemical Journal, Vol. 441, No. 1, 2012, p. 219-226.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  22. Published

    Ajoene, a Sulfur-Rich Molecule from Garlic, Inhibits Genes Controlled by Quorum Sensing. / Jakobsen, Tim Holm; van Gennip, Maria; Phipps, Richard Kerry; Shanmugham, Meenakshi Sundaram; Christensen, Louise Dahl; Alhede, Morten; Skindersoe, Mette Eline; Rasmussen, Thomas Bovbjerg; Friedrich, Karlheinz; Uthe, Friedrich; Jensen, Peter Østrup; Moser, Claus Ernst; Nielsen, Kristian Fog; Eberl, Leo; Larsen, Thomas Ostenfeld; Tanner, David; Høiby, Niels; Bjarnsholt, Thomas; Givskov, Michael.

    In: Antimicrobial Agents and Chemotherapy, Vol. 56, No. 5, 2012, p. 2314-2325.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  23. Published

    A polyphasic approach for the characterization of endophytic Alternaria strains isolated from grapevines. / Polizzotto, Rachele; Andersen, Birgitte; Martini, Marta; Grisan, Simone; Assante, Gemma; Musetti, Rita.

    In: Journal of Microbiological Methods, Vol. 88, No. 1, 2012, p. 162-171.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  24. Published

    Applied systems biology - vanillin production in Saccharomyces cerevisiae. / Strucko, Tomas; Eriksen, Carsten; Nielsen, J.; Mortensen, Uffe Hasbro.

    In: The F E B S Journal (Online), Vol. 279, No. Supplement s1, 2012, p. 525-525.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  25. Published

    Aspergillus bertholletius sp. nov. from Brazil Nuts. / Taniwaki, Marta H.; Pitt, John I.; Iamanaka, Beatriz T.; Sartori, Daniele; Copetti, Marina V.; Balajee, Arun; Fungaro, Maria Helena P.; Frisvad, Jens Christian.

    In: P L o S One, Vol. 7, No. 8, 2012.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  26. Published

    Aspergillus hydrophobins - Identification, classification and characterization. / Jensen, Britt Guillaume; Nielsen, Kristian Fog (Main supervisor); Søndergaard, Ib (Supervisor); Pedersen, Mona Højgaard (Supervisor); Frisvad, Jens Christian (Supervisor); Jelsbak, Lars (Supervisor); Jacobsen, Susanne (Supervisor).

    Department of Systems Biology, DTU, 2012. 212 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2013

  27. Published

    Atlantinone A, a meroterpenoid produced by Penicillium ribeum and several cheese associated Penicillium species. / Dalsgaard, Petur W.; Petersen, Bent O.; Duus, Jens Ø.; Zidorn, Christian; Frisvad, Jens Christian; Christophersen, Carsten; Larsen, Thomas Ostenfeld.

    In: Metabolites, Vol. 2, 2012, p. 214-220.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  28. Published

    Bioconversion of crude glycerol feedstocks into ethanol by Pachysolen tannophilus. / Liu, Xiaoying; Jensen, Peter Ruhdal; Workman, Mhairi.

    In: Bioresource Technology, Vol. 104, 2012, p. 559-586.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  29. Published

    Characterization of the AN6448 cluster in Aspergillus nidulans. / Nielsen, Jakob Blæsbjerg; Klejnstrup, Marie Louise; Khorsand-Jamal, Paiman; Holm, Dorte Koefoed; Nielsen, Michael Lynge; Kabat, Anna Monika; Rank, Christian; Gotfredsen, Charlotte Held; Larsen, T. O.; Mortensen, Uffe Hasbro.

    In: Planta Medica, Vol. 78, No. 11, 2012, p. 1113-1113.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  30. Published

    Chemical analysis of a genome wide polyketide synthase gene deletion library in Aspergillus nidulans. / Larsen, Thomas Ostenfeld; Klejnstrup, Marie Louise; Nielsen, Jakob Blæsbjerg; Holm, Dorte Koefoed; Petersen, Lene Maj; Klitgaard, Andreas; Nielsen, Kristian Fog; Andersen, Mikael Rørdam; Mortensen, Uffe Hasbro.

    2012. Abstract from Directing Biosynthesis III, Nottingham, United Kingdom.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2012

  31. Published

    Chemical and molecular characterization of Phomopsis and Cytospora-like endophytes from different host plants in Brazil. / Abreu, Lucas M.; Costa, Sarah S.; Pfenning, Ludwig H.; Takahashi, Jacqueline A.; Larsen, Thomas Ostenfeld; Andersen, Birgitte.

    In: Fungal Biology, Vol. 116, No. 2, 2012, p. 249-260.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  32. Published

    Children s health and its association with indoor environments in Danish homes and daycare centres – methods. / Clausen, Geo; Høst, A.; Toftum, Jørn; Bekö, Gabriel; Weschler, Charles J.; Callesen, M.; Buhl, S.; Ladegaard, M. B.; Langer, S.; Andersen, Birgitte; Sundell, Jan; Bornehag, Carl-Gustaf; Sigsgaard, T.

    In: Indoor Air, Vol. 22, 2012, p. 467-475.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  33. Published

    Chitin elicitation of natural product production in marine bacteria. / Månsson, Maria; Wietz, Matthias; Larsen, Thomas Ostenfeld; Gram, Lone.

    2012. Abstract from Gordon Conference on Marine Natural Products, Venture, CA, United States.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2012

  34. Published

    Comparative chemistry of Aspergillus oryzae (RIB40) and A. flavus (NRRL 3357). / Rank, Christian; Klejnstrup, Marie Louise; Petersen, Lene Maj; Kildgaard, Sara; Frisvad, Jens Christian; Gotfredsen, Charlotte Held; Larsen, Thomas Ostenfeld.

    In: Metabolites, Vol. 2, 2012, p. 39-56.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  35. Published

    Comparison of laser diffraction and image analysis for measurement of Streptomyces coelicolor cell clumps and pellets.. / Rønnest, Nanna Petersen; Stocks, Stuart M; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Biotechnology Letters, Vol. 34, No. 8, 2012, p. 1465-1473.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  36. Published

    Delimitation and characterisation of Talaromyces purpurogenus and related species. / Yilmaz, N.; Houbraken, J.; Hoekstra, E. S.; Frisvad, Jens Christian; Visagie, C. M.; Samson, Ramona.

    In: Persoonia, Vol. 29, 2012, p. 39-54.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  37. Published

    Development of a screening approach for exploring cell factory potential through metabolic flux analysis and physiology. / Knudsen, Peter Boldsen; Nielsen, Kristian Fog; Thykær, Jette.

    In: New Biotechnology, 2012, p. S212.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  38. Published

    Discovery of novel secondary metabolites in Aspergillus aculeatus. / Petersen, Lene Maj; Holm, Dorte Koefoed; Gotfredsen, Charlotte Held; Larsen, Thomas Ostenfeld.

    In: Planta Medica, Vol. 78, No. 11, 2012, p. 1159-1160.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  39. Published

    Disparate SAR Data of Griseofulvin Analogues for the Dermatophytes Trichophyton mentagrophytes, T. rubrum, and MDA-MB-231 Cancer Cells. / Rønnest, Mads Holger; Raab, Marc S.; Anderhub, Simon; Boesen, Sven; Krämer, Alwin; Larsen, Thomas Ostenfeld; Clausen, Mads Hartvig.

    In: Journal of Medicinal Chemistry, Vol. 55, No. 2, 2012, p. 652-660.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  40. Published

    Draft Genome Sequence of the Yeast Pachysolen tannophilus CBS 4044/NRRL Y-2460. / Liu, Xiaoying ; Kaas, Rolf Sommer; Jensen, Peter Ruhdal; Workman, Mhairi.

    In: Eukaryotic Cell (Online Edition), Vol. 11, No. 6, 2012, p. 827.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  41. Published

    Dynamics in population heterogeneity during batch and continuous fermentation of Saccharomyces cerevisiae. / Heins, Anna-Lena; Lencastre Fernandes, Rita; Lundin, L.; Carlquist, M.; Sörensen, S.; Gernaey, Krist; Eliasson Lantz, Anna.

    In: New Biotechnology, Vol. 29S, 2012, p. S199-S200.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  42. Published

    Elucidation of the biosynthesis of meroterpenoid yanuthone D in Aspergillus Niger. / Holm, Dorte Koefoed; Petersen, Lene Maj; Klitgaard, Andreas; Jarczynska, Zofia Dorota; Larsen, Thomas Ostenfeld; Mortensen, Uffe Hasbro.

    In: Planta Medica, Vol. 78, No. 11, 2012, p. 1069-1069.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  43. Published

    Rasamsonia, a new genus comprising thermotolerant and thermophilic Talaromyces and Geosmithia species. / Houbraken, J.; Spierenburg, H.; Frisvad, Jens Christian.

    In: Antonie van Leeuwenhoek, Vol. 101, No. 2, 2012, p. 403-421.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  44. Published

    Erratum to “Food fermentations: microorganisms with technological beneficial use” [International Journal of Food Microbiology 154 (2012) 87–97]. / Bourdichon, François; Casaregola, Serge; Farrokh, Choreh; Frisvad, Jens Christian; Gerds, Monica L.; Hammes, Walter P.; Harnett, James; Huys, Geert; Laulund, Svend; Ouwehand, Arthur; Powell, Ian B.; Prajapati, Jashbhai B.; Seto, Yasuyuki; Ter Schure, Eelko; Van Boven, Aart; Vankerckhoven, Vanessa; Zgoda, Annabelle; Tuijtelaars, Sandra; Hansen, Egon Bech.

    In: International Journal of Food Microbiology, Vol. 156, No. 301, 2012.

    Publication: Research - peer-review › Comment/debate – Annual report year: 2012

  45. Published

    Establishing a high throughput method for medium optimization – a case study using Streptomyces lividans as host for production of heterologous protein. / Rattleff, Stig; Thykaer, Jette; Lantz, Anna Eliasson.

    In: New Biotechnology, Vol. 29S, 2012, p. S50.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  46. Published

    Establishing new microbial cell factories for sustainable bioprocesses. / Workman, Mhairi; Holt, Philippe; Liu, Xiaoying .

    In: New Biotechnology, Vol. 29S, 2012, p. S75.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  47. Published

    Evaluation of cell factory performance through determination of intracellular metabolites using LC-MS/MS. / Magdenoska, Olivera; Martinussen, Jan; Nielsen, Kristian Fog; Thykær, Jette.

    In: New Biotechnology, Vol. 29S, 2012.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  48. Published

    Experimental poisoning by Baccharis megapotamica var. weirii in buffalo. / Oliveira-Filho, José C.; Carmo, Priscila M.S.; Iversen, Anita; Nielsen, Kristian Fog; Barros, Claudio S. L.

    In: Pesquisa Veterinaria Brasileira, Vol. 32, No. 5, 2012, p. 383-390.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  49. Published

    Food as a Source for Quorum Sensing Inhibitors: Iberin from Horseradish Revealed as a Quorum Sensing Inhibitor of Pseudomonas aeruginosa. / Jakobsen, Tim Holm; Bragason, Steinn Kristinn; Phipps, Richard Kerry; Christensen, Louise Dahl; van Gennip, Maria; Alhede, Morten; Skindersoe, Mette; Larsen, Thomas Ostenfeld; Høiby, Niels; Bjarnsholt, Thomas; Givskov, Michael.

    In: Applied and Environmental Microbiology, Vol. 78, No. 7, 2012, p. 2410-2421.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  50. Published

    Food fermentations: Microorganisms with technological beneficial use. / Bourdichon, François; Casaregola, Serge; Farrokh, Choreh; Frisvad, Jens Christian; Gerds, Monica L.; Hammes, Walter P.; Harnett, James; Huys, Geert; Laulund, Svend; Ouwehand, Arthur; Powell, Ian B.; Prajapati, Jashbhai B.; Seto, Yasuyuki; Ter Schure, Eelko; Van Boven, Aart; Vankerckhoven, Vanessa; Zgoda, Annabelle; Tuijtelaars, Sandra; Hansen, Egon Bech.

    In: International Journal of Food Microbiology, Vol. 154, No. 3, 2012, p. 87-97.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  51. Published

    Fungal natural products targeting chronic lymphocytic leukemia. / Bladt, Tanja Thorskov; Kildgaard, Sara; Knudsen, Peter Boldsen; Gotfredsen, Charlotte Held; Duerr, C.; Seiffert, M.; Larsen, Thomas Ostenfeld.

    In: Planta Medica, Vol. 78, No. 11, 2012, p. 1158-1158.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  52. Published

    Fungal Origins of the Bicyclo[2.2.2]diazaoctane Ring System of Prenylated Indole Alkaloids. / Finefield, Jennifer M.; Frisvad, Jens C.; Sherman, David H.; Williams, Robert M.

    In: Journal of Natural Products, Vol. 75, No. 4, 2012, p. 812-833.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  53. Published

    Gene Sequence Based Clustering Assists in Dereplication of Pseudoalteromonas luteoviolacea Strains with Identical Inhibitory Activity and Antibiotic Production. / Vynne, Nikolaj Grønnegaard; Månsson, Maria; Gram, Lone.

    In: Marine Drugs, Vol. 10, No. 8, 2012, p. 1729-1740.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  54. Published

    Genetics of Polyketide Metabolism in Aspergillus nidulans. / Klejnstrup, Marie L.; Frandsen, Rasmus John Normand; Holm, Dorte Koefoed; Nielsen, Morten Thrane; Mortensen, Uffe Hasbro; Larsen, Thomas Ostenfeld; Nielsen, Jakob Blæsbjerg.

    In: Metabolites, Vol. 2, No. 1, 2012, p. 100-133.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  55. Published

    Genome‐scale metabolic representation of Amycolatopsis balhimycina. / Vongsangnak, Wanwipa; Figueiredo, Luís Filipe; Förster, Jochen; Weber, Tilmann; Thykaer, Jette; Stegmann, Evi; Wohlleben, Wolfgang; Nielsen, Jens.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 7, 2012, p. 1798-1807.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  56. Published

    GF-15, a Novel Inhibitor of Centrosomal Clustering, Suppresses Tumor Cell Growth In Vitro and In Vivo. / Raab, Marc S.; Breitkreutz, Iris; Anderhub, Simon; Rønnest, Mads Holger; Leber, Blanka; Larsen, Thomas Ostenfeld; Weiz, Ludmila; Konotop, Gleb; Hayden, Patrick J.; Podar, Klaus; Fruehauf, Johannes; Nissen, Felix; Mier, Walter; Haberkorn, Uwe; Ho, Anthony D.; Goldschmidt, Hartmut; Anderson, Kenneth C.; Clausen, Mads Hartvig; Krämer, Alwin.

    In: Cancer Research, Vol. 72, No. 20, 2012, p. 5374-5385.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  57. Published

    Heterogeneity in recombinant protein production. / Schalén, Martin; Johanson, Ted; Lundin, Luisa; Sørensen, Søren; Eliasson Lantz, Anna.

    In: New Biotechnology, Vol. 29S, 2012, p. S78.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  58. Published

    Hypopulvins, novel peptaibiotics from the polyporicolous fungus Hypocrea pulvinata, are produced during infection of its natural hosts. / Röhrich, Christian René; Iversen, Anita; Jaklitsch, Walter Michael; Voglmayr, Hermann; Berg, Albrecht; Dörfelt, Heinrich; Thrane, Ulf; Vilcinskas, Andreas; Nielsen, Kristian Fog; von Döhren, Hans; Brückner, Hans; Degenkolb, Thomas.

    In: Fungal Biology, Vol. 116, No. 12, 2012, p. 1219-1231.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  59. Published

    Identification of a Transcription Factor Controlling pH-Dependent Organic Acid Response in Aspergillus niger.. / Poulsen, Lars; Andersen, Mikael Rørdam; Lantz, Anna Eliasson; Thykaer, Jette.

    In: P L o S One, Vol. 7, No. 12, 2012, p. e50596.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  60. Published

    Impact of stoichiometry representation on simulation of genotype-phenotype relationships in metabolic networks.. / Brochado, Ana Rita; Andrejev, Sergej; Maranas, Costas D.; Patil, Kiran R.

    In: P L o S Computational Biology, Vol. 8, No. 11, 2012, p. e1002758.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  61. Published

    Industrial glucoamylase fed‐batch benefits from oxygen limitation and high osmolarity. / Pedersen, Lasse; Hansen, Kim; Nielsen, Jens; Eliasson Lantz, Anna; Thykær, Jette.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 1, 2012, p. 116-124.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  62. Published

    Integrated analytical approaches towards toxic algal natural products discovery. / Larsen, Thomas Ostenfeld; Rasmussen, Silas Anselm; Gedsted Andersen, Mikael; Blossom, Hannah Eva; Christophersen, Carsten; Hansen, Per Juel; Nielsen, Kristian Fog.

    2012. Abstract from 15th International Conference in Harmful Algae, Gyeongnam, South Korea.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2012

  63. Published

    Involvement of a Natural Fusion of a Cytochrome P450 and a Hydrolase in Mycophenolic Acid Biosynthesis. / Hansen, Bjarne Gram; Mnich, Ewelina; Nielsen, Kristian Fog; Nielsen, Jakob Blæsbjerg; Nielsen, Morten Thrane; Mortensen, Uffe Hasbro; Larsen, Thomas Ostenfeld; Patil, Kiran Raosaheb.

    In: Applied and Environmental Microbiology, Vol. 78, No. 14, 2012, p. 4908-4913.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  64. Published

    Letter to the editor on ‘Fumonisin contamination and fumonisin producing black Aspergilli in dried vine fruits of different origin, IJFM. 143:143–149’. / Nielsen, Kristian Fog; Logrieco, Antonio F.

    In: International Journal of Food Microbiology, Vol. 152, No. 45, 2012.

    Publication: Research - peer-review › Letter – Annual report year: 2012

  65. Published

    Linking of Fusarium graminearum PKS3 to bostrycoidin production. / Frandsen, Rasmus John Normand.

    2012. Poster session presented at Cellular & Molecular Fungal Biology, Holderness, NH, United States.

    Publication: Research - peer-review › Poster – Annual report year: 2012

  66. Published

    Mapping the polysaccharide degradation potential of Aspergillus niger. / Andersen, Mikael Rørdam; Giese, Malene; de Vries, Ronald P.; Nielsen, Jens.

    In: B M C Genomics, Vol. 13, 2012.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  67. Published

    Media and growth conditions for induction of secondary metabolite production. / Frisvad, Jens Christian.

    In: Methods in Molecular Biology, Vol. 944, 2012, p. 47-58.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  68. Published

    Microbial production of indolylglucosinolate through engineering of a multi-gene pathway in a versatile yeast expression platform. / Mikkelsen, Michael Dalgaard; Buron, Line Due; Salomonsen, Bo; Olsen, Carl Erik; Hansen, Bjarne Gram; Mortensen, Uffe Hasbro; Halkier, Barbara Ann.

    In: Metabolic Engineering, Vol. 14, No. 2, 2012, p. 104-111.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  69. Published

    New penicillin-producing Penicillium species and an overview of section Chrysogena. / Houbraken, J.; Frisvad, Jens Christian; Seifert, K. A.; Overy, David Patrick; Tuthill, D. M.; Valdez, J. G.; Samson, Ramona.

    In: Persoonia, Vol. 29, 2012, p. 78-100.

    Publication: Research - peer-review › Journal article – Annual report year: 2013

  70. Published

    New producers and new 11-, 19-, and 20-residue peptaibiotics: suzukacillins B and C. / Roehrich, C. R.; Iversen, Anita; Degenkolb, T.; Jaklitsch, W. M.; Voglmayr, H.; Thrane, Ulf; Vilcinskas, A.; Nielsen, Kristian Fog; Brueckner, H.

    In: Journal of Peptide Science, Vol. 18, No. S1, 2012, p. S73-S73.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  71. Published

    Nigribactin, a Novel Siderophore from Vibrio nigripulchritudo, Modulates Staphylococcus aureus Virulence Gene Expression. / Nielsen, Anita; Månsson, Maria; Wietz, Matthias; Varming, Anders N.; Phipps, Richard Kerry; Larsen, Thomas Ostenfeld; Gram, Lone; Ingmer, Hanne.

    In: Marine Drugs, Vol. 10, No. 11, 2012, p. 2584-2595.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  72. Published

    Nonribosomal Peptide Synthetase Genes pesL and pes1 Are Essential for Fumigaclavine C Production in Aspergillus fumigatus. / O'Hanlon, Karen A.; Gallagher, Lorna; Schrettl, Markus; Jöchl, Christoph; Kavanagh, Kevin; Larsen, Thomas Ostenfeld; Doyle, Sean.

    In: Applied and Environmental Microbiology, Vol. 78, No. 9, 2012, p. 3166-3176.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  73. Published

    Occurrence of different trichothecenes and deoxynivalenol-3-β-D-glucoside in naturally and artificially contaminated Danish cereal grains and whole maize plants.. / Rasmussen, P. H.; Nielsen, Kristian Fog; Ghorbani, F.; Spliid, Niels Henrik; Nielsen, G. C.; Jørgensen, L. N.

    In: Mycotoxin Research, Vol. 28, No. 3, 2012, p. 181-190.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  74. Published

    One-millilitre microbioreactor with impeller for improved mixing. / Bolic, Andrijana; Krühne, Ulrich; Prior, Rasmus A.; Vilby, Tobias; Hugelier, Siewert; Eliasson Lantz, Anna; Gernaey, Krist.

    2012. Poster session presented at 12th International Conference on Microreaction Technology, Lyon, France.

    Publication: Research › Poster – Annual report year: 2012

  75. Published

    Patulin and secondary metabolite production by marine-derived Penicillium strains. / Vansteelandt, Marieke; Kerzaon, Isabelle; Blanchet, Elodie; Fossi Tankoua, Olivia; Robiou Du Pont, Thibaut; Joubert, Yolaine; Monteau, Fabrice; Le Bizec, Bruno; Frisvad, Jens C.; Pouchus, Yves François; Grovel, Olivier.

    In: Fungal Biology, Vol. 116, No. 9, 2012, p. 954-961.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  76. Published

    Phaeobacter gallaeciensis Reduces Vibrio anguillarum in Cultures of Microalgae and Rotifers, and Prevents Vibriosis in Cod Larvae. / D'Alvise, Paul; Lillebø, Siril; Prol García, María Jesús; Wergeland, Heidrun I; Nielsen, Kristian Fog; Bergh, Oivind; Gram, Lone.

    In: P L o S One, Vol. 7, No. 8, 2012, p. e43996.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  77. Published

    Physiological characterisation of Yarrowia lipolytica yields new features of the strain. / Holt, Philippe; Thykær, Jette; Workman, Mhairi.

    In: New Biotechnology, Vol. 29S, 2012, p. S212.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  78. Published

    Physiological heterogeneities in microbial populations and implications for physical stress tolerance. / Carlquist, Magnus; Fernandes, Rita Lencastre; Helmark, Søren; Heins, Anna-Lena; Lundin, Luisa; Sorensen, Søren J.; Gernaey, Krist ; Eliasson Lantz, Anna.

    In: Microbial Cell Factories, Vol. 11, No. 94, 2012.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  79. Published

    Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours. / Yamada, Takuji; Waller, Alison S.; Raes, Jeroen; Zelezniak, Aleksej; Perchat, Nadia; Perret, Alain; Salanoubat, Marcel; Patil, Kiran R.; Weissenbach, Jean; Bork, Peer.

    In: Molecular Systems Biology, Vol. 8, 2012.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  80. Published

    Process for the Manufacture of Ajoene Derivatives. / Larsen, Thomas Ostenfeld (Inventor); Givskov, Michael Christian (Inventor); Bjarnsholt, Thomas (Inventor); Jakobsen, Tim Holm (Inventor); Christensen, Louise Dahl (Inventor); Shanmugham, Meenakshi Sundaram (Inventor); Phipps, Richard Kerry (Inventor); Tanner, David Ackland (Inventor); Høiby, Niels (Inventor); Jensen, Peter Østrup (Inventor).

    IPC No.: A61K31/105. Jun 14, 2012.

    Publication: Research › Patent – Annual report year: 2012

  81. Published

    Production of Monascus-like pigments. / Frisvad, Jens Christian (Inventor); Meyer, Anne S. (Inventor); Mapari, Sameer Shamsuddin (Inventor); Thrane, Ulf (Inventor).

    IPC No.: A23L1/275. Feb 23, 2012.

    Publication: Research › Patent – Annual report year: 2012

  82. Published

    Production of novel fusarielins by ectopic activation of the polyketide synthase 9 cluster in Fusarium graminearum. / Sørensen, Jens Laurids; Hansen, Frederik Teilfeldt; Sondergaard, Teis Esben; Staerk, Dan; Lee, T. Verne; Wimmer, Reinhard; Klitgaard, Louise Graabæk; Purup, Stig; Giese, Henriette; Frandsen, Rasmus John Normand.

    In: Environmental Microbiology, Vol. 14, No. 5, 2012, p. 1159-1170.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  83. Published

    Quick guide to polyketide synthase and nonribosomal synthetase genes in Fusarium. / Hansen, Jørgen T.; Sørensen, Jens L.; Giese, Henriette; Sondergaard, Teis E.; Frandsen, Rasmus J.N.

    In: International Journal of Food Microbiology, Vol. 155, No. 3, 2012, p. 128-136.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  84. Published

    Rebuttal to the response letter to our letter to the editor on ‘Fumonisin contamination and fumonisin producing black Aspergilli in dried vine fruits of different origin published in International Journal of Food Microbiology, 143:143–149’. / Nielsen, Kristian Fog; Logrieco, Antonio F.

    In: International Journal of Food Microbiology, Vol. 152, 2012, p. 49-50.

    Publication: Research - peer-review › Letter – Annual report year: 2012

  85. Published

    Redirection of pigment biosynthesis to isocoumarins in Fusarium. / Sørensen, Jens Laurids; Nielsen, Kristian Fog; Sondergaard, Teis Esben.

    In: Fungal Genetics and Biology, Vol. 49, No. 8, 2012, p. 613-618.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  86. Published

    Regulatory processes in Aspergillus niger. / Poulsen, Lars; Thykær, Jette (Supervisor); Eliasson Lantz, Anna (Supervisor).

    Department of Systems Biology, DTU, 2012. 271 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2012

  87. Published

    Robust, small-scale cultivation platform for Streptomyces coelicolor. / Sohoni, Sujata Vijay; Bapat, Prashant Madhusudan; Lantz, Anna Eliasson.

    In: Microbial Cell Factories, Vol. 11, No. 1, 2012.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  88. Published

    Screening of Aspergillus nidulans metabolites from habitat mimicking media using LC-DAD-TOFMS system. / Klitgaard, Andreas; Holm, Dorte Koefoed; Frisvad, Jens Christian; Nielsen, Kristian Fog.

    In: Planta Medica, Vol. 78, No. P167, 2012.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  89. Published

    Screening the natural habitat: New peptaibiotics from specimens and pure cultures of the fungicolous fungus Hypocrea pulvinata. / Roehrich, C. R.; Iversen, Anita; Degenkolb, T.; Jaklitsch, W. M.; Voglmayr, H.; Berg, Anette; Thrane, U.; Vilcinskas, A.; Nielsen, Kristian Fog; Bruecknerf, H.

    In: Journal of Peptide Science, Vol. 18, No. S1, 2012, p. S74-S74.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2012

  90. Published

    Searching for eukaryotic life preserved in Antarctic permafrost. / Zucconi, L.; Selbmann, L.; Buzzini, P.; Turchetti, B.; Guglielmin, M.; Frisvad, J. C.; Onofri, S.

    In: Polar Biology, Vol. 35, No. 5, 2012, p. 749-757.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  91. Published

    Significance and occurrence of fumonisins from Aspergillus niger. / Mogensen, Jesper Mølgaard; Nielsen, Kristian Fog (Main supervisor); Larsen, Thomas Ostenfeld (Supervisor); Frisvad, Jens Christian (Supervisor).

    Department of Systems Biology, DTU, 2012. 170 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2013

  92. Published

    Targeted Gene Replacement in Fungal Pathogens via Agrobacterium tumefaciens- Mediated Transformation. / Frandsen, Rasmus John Normand; Frandsen, Mette; Giese, Nanna Henriette.

    In: Plant Fungal Pathogens: Methods and Protocols. Vol. 835 Humana Press, 2012. p. 17-45 (Methods in molecular biology).

    Publication: Research - peer-review › Book chapter – Annual report year: 2012

  93. Published

    The effect of cocoa fermentation and weak organic acids on growth and ochratoxin A production by Aspergillus species. / Copetti, Marina V.; Iamanaka, Beatriz T.; Mororó, Raimundo C.; Pereira, José L.; Frisvad, Jens C.; Taniwaki, Marta H.

    In: International Journal of Food Microbiology, Vol. 155, No. 3, 2012, p. 158-164.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  94. Published

    Topology Optimized Bioreactors — A Design Example with Immobilized Yeast. / Lencastre Fernandes, Rita (Author); Schäpper, Daniel (Author); Eliasson Lantz, Anna (Author); Okkels, Fridolin (Author); Bruus, Henrik (Author); Gernaey, Krist (Author).

    2012. Bioprocessing Summit 2012, Boston, MA, United States, 20-08-12.

    Publication: Research › Sound/Visual production (digital) – Annual report year: 2012

  95. Published

    Towards improved bioprocess operation: monitoring, modeling and control. / Gernaey, Krist; Eliasson Lantz, Anna; Albæk, Mads Orla; Krühne, Ulrich.

    2012. Abstract from Nordic Bioprocess Improvement Seminar 2, Kgs.Lyngby, Denmark.

    Publication: Research › Conference abstract for conference – Annual report year: 2012

  96. Published

    Wide Distribution of Closely Related, Antibiotic-Producing Arthrobacter Strains throughout the Arctic Ocean. / Wietz, Matthias; Månsson, Maria; Bowman, Jeff S.; Blom, Nikolaj; Ng, Yin; Gram, Lone.

    In: Applied and Environmental Microbiology, Vol. 78, No. 6, 2012, p. 2039-2042.

    Publication: Research - peer-review › Journal article – Annual report year: 2012

  97. 2011
  98. Published

    Functional Analysis and Heterologous expression of Polyketides Gene Cluster. / Kildegaard, Kanchana Rueksomtawin; Larsen, Thomas Ostenfeld (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2011.

    Publication: Research › Ph.d. thesis – Annual report year: 2011

  99. Published

    New Principles for Targeting Cancer - a Rational Small Molecule Approach. / Rønnest, Mads Holger; Larsen, Thomas Ostenfeld (Supervisor); Clausen, Mads Hartvig (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2011.

    Publication: Research › Ph.d. thesis – Annual report year: 2011

  100. Published

    Metabollic Engineering of Saccharomyces Cereviae a,omi acid metabolism for production of products of industrial interest. / Chen, Xiao; Kielland-Brandt, Morten (Supervisor); Karhumaa, Kaisa (Supervisor); Nielsen, Jens (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2011.

    Publication: Research › Ph.d. thesis – Annual report year: 2011

  101. Published

    Discovery of Bioactive Natural Products from Marine Bacteria. / Månsson, Maria; Larsen, Thomas Ostenfeld (Supervisor); Nielsen, Kristian Fog (Supervisor); Gotfredsen, Charlotte Held (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2011.

    Publication: Research › Ph.d. thesis – Annual report year: 2011

  102. Published

    A biochemically structured model for ethanol fermentation by Kluyveromyces marxianus: A batch fermentation and kinetic study. / Sansonetti, Sascha; Hobley, Timothy John; Calabrò, V.; Villadsen, John; Sin, Gürkan.

    In: Bioresource Technology, Vol. 102, No. 16, 2011, p. 7513-7520.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  103. Published

    A combined genetic and multi medium approach revels new secondary metabolites in Aspergillus nidulans. / Klejnstrup, Marie Louise; Nielsen, Morten Thrane; Frisvad, Jens Christian; Mortensen, Uffe Hasbro; Larsen, Thomas Ostenfeld.

    2011. Abstract from 26th Fungal Genetics Conference, Asilomar, CA, United States.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  104. Published

    A genome-wide polyketide synthase deletion library uncovers novel genetic links to polyketides and meroterpenoids in Aspergillus nidulans. / Nielsen, Michael Lynge; Nielsen, Jakob Blæsbjerg; Rank, Christian; Klejnstrup, Marie Louise; Holm, Dorte Koefoed; Brogaard, Katrine Husted; Hansen, Bjarne Gram; Frisvad, Jens Christian; Larsen, Thomas Ostenfeld; Mortensen, Uffe Hasbro.

    In: F E M S Microbiology Letters, Vol. 321, No. 2, 2011, p. 157-166.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  105. Published

    A guide to binary vectors and strategies for targeted genome modification in fungi using Agrobacterium tumefaciens-mediated transformation. / Frandsen, Rasmus John Normand.

    In: Journal of Microbiological Methods, Vol. 87, No. 3, 2011, p. 247-262.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  106. Published

    Alcohol-based quorum sensing plays a role in adhesion and sliding motility of the yeast Debaryomyces hansenii. / Gori, Klaus; Knudsen, Peter Boldsen; Nielsen, Kristian Fog; Arneborg, Nils; Jespersen, Lene.

    In: F E M S Yeast Research, Vol. 11, No. 8, 2011, p. 643-652.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  107. Published

    A magnetic adsorbent-based process for semi-continuous PEGylation of proteins. / Ottow, Kim Ekelund; Maury, Trine Lütken; Hobley, Timothy John; Lund-Olesen, Torsten; Hansen, Mikkel Fougt.

    In: Biotechnology Journal, Vol. 6, No. 4, 2011, p. 396-409.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  108. Published

    A new class of IMP dehydrogenase with a role in self-resistance of mycophenolic acid producing fungi. / Hansen, Bjarne Gram; Genee, Hans Jasper; Kaas, Christian Schrøder; Nielsen, Jakob Blæsbjerg; Regueira, Torsten Bak Høybye; Mortensen, Uffe Hasbro; Frisvad, Jens Christian; Patil, Kiran Raosaheb.

    In: B M C Microbiology, Vol. 11, No. 1, 2011, p. 202.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  109. Published

    Application of native signal sequences for recombinant proteins secretion in Pichia pastoris. / Borodina, Irina; Do, Duy Duc; Eriksen, Jens C.; Strucko, Tomas; Mortensen, Uffe Hasbro; Eliasson Lantz, Anna.

    2011. Abstract from Biochemical and Molecular Engineering : Emerging Frontiers, Seattle, Washington, USA, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  110. Published

    Aspergillus niger contains the cryptic phylogenetic species A. awamori. / Perrone, Giancarlo; Stea, Gaetano; Epifani, Filomena; Varga, János; Frisvad, Jens Christian; Samson, Robert A.

    In: Fungal Biology, Vol. 115, No. 11, 2011, p. 1138-1150.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  111. Published

    Aspergillus saccharolyticus sp. nov., a new black Aspergillus species isolated in Denmark. / Sørensen, Annette; Lübeck, Peter S.; Lübeck, Mette; Nielsen, Kristian Fog; Ahring, Birgitte K.; Teller, Philip J.; Frisvad, Jens Christian.

    In: International Journal of Systematic and Evolutionary Microbiology, Vol. 60, 2011, p. 3077-3083.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  112. Published

    Aspergillus triggers phenazine production in Pseudomonas aeruginosa. / Jensen, Britt Guillaume; Jelsbak, Lars; Søndergaard, Ib; Pedersen, Mona Højgaard; Frisvad, Jens Christian; Nielsen, Kristian Fog.

    2011. Abstract from European Congress on Microbial Biofilms – Basic and Clinical Aspects, Copenhagen, Denmark, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  113. Published

    Associations between Fungal Species and Water-Damaged Building Materials. / Andersen, Birgitte; Frisvad, Jens Christian; Søndergaard, Ib; Rasmussen, Ib S.; Larsen, Lisbeth S.

    In: Applied and Environmental Microbiology, Vol. 77, No. 12, 2011, p. 4180-4188.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  114. Published

    Bacillus subtilis Two-Component System Sensory Kinase DegS Is Regulated by Serine Phosphorylation in Its Input Domain. / Jers, Carsten; Kobir, Ahasanul; Søndergaard, Elsebeth Oline; Jensen, Peter Ruhdal; Mijakovic, Ivan.

    In: P L o S One, Vol. 6, No. 2, 2011, p. e14653.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  115. Published

    Bioactivity, Chemical Profiling, and 16S rRNA-Based Phylogeny of Pseudoalteromonas Strains Collected on a Global Research Cruise. / Vynne, Nikolaj Grønnegaard; Månsson, Maria; Nielsen, Kristian Fog; Gram, Lone.

    In: Marine Biotechnology, Vol. 13, No. 6, 2011, p. 1062-1073.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  116. Published

    Cataloguing of toxic species of Aspergillus: Occurrence, polyphasic taxonomy and distribution. / Lopes, A.S.; Taniwaki, M.H.; Frisvad, Jens Christian; Fungaro, M.H.T.; Possari, C.K.; Ferranta, L.S.; Pereira, J.L.; Lamanaka, B.T.

    2011. Poster session presented at 26th Congresso Brasileiro Microbiologia, Foz do Iguazu, Brazil.

    Publication: Research - peer-review › Poster – Annual report year: 2011

  117. Published

    Characterization of Emericella nidulans RodA and DewA hydrophobin mutants. / Jensen, Britt Guillaume; Nielsen, Jakob Blæsbjerg; Pedersen, Mona Højgaard; Søndergaard, Ib; Frisvad, Jens Christian; Nielsen, Kristian Fog.

    2011. Abstract from The Fungal Genetics Conference, California, USA, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  118. Published

    Characterization of Emericella nidulans RodA and DewA hydrophobin mutants. / Jensen, Britt Guillaume; Nielsen, Jakob Blæsbjerg; Pedersen, Mona Højgaard; Søndergaard, Ib; Frisvad, Jens Christian; Nielsen, Kristian Fog.

    2011. Abstract from International Aspergillus Meeting, Pacific Grove, California, USA, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  119. Published

    Chemical rationale for selection of isolates for genome sequencing. / Rank, Christian; Larsen, Thomas Ostenfeld; Frisvad, Jens Christian.

    2011. Abstract from 26th Fungal Genetics Conference, Asilomar, CA, United States.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  120. Published

    Chitin stimulates production of the antibiotic andrimid in a Vibrio corallilyticus strain. / Wietz, Matthias; Månsson, Maria; Gram, Lone.

    In: Environmental Microbiology Reports, Vol. 3, No. 5, 2011, p. 559-564.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  121. Published

    Comparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88. / Andersen, Mikael Rørdam; Salazar, Margarita Pena; Schaap, Peter J.; van de Vondervoort, Peter J. I.; Culley, David; Thykær, Jette; Frisvad, Jens Christian; Nielsen, Kristian Fog; Albang, Richard; Albermann, Kaj; Berka, Randy M.; Braus, Gerhard H.; Braus-Stromeyer, Susanna A.; Corrochano, Luis M.; Dai, Ziyu; van Dijck, Piet W.M.; Hofmann, Gerald; Lasure, Linda L.; Magnuson, Jon K.; Menke, Hildegard; Meijer, Martin; Meijer, Susan Lisette; Nielsen, Jakob Blæsbjerg; Nielsen, Michael Lynge; van Ooyen, Albert J.J.; Pel, Herman J.; Poulsen, Lars; Samson, Rob A.; Stam, Hein; Tsang, Adrian; van den Brink, Johannes M.; Atkins, Alex; Aerts, Andrea; Shapiro, Harris; Pangilinan, Jasmyn; Salamov, Asaf; Lou, Yigong; Lindquist, Erika; Lucas, Susan; Grimwood, Jane; Grigoriev, Igor V.; Kubicek, Christian P.; Martinez, Diego; van Peij, Noël N. M. E.; Roubos, Johannes A.; Nielsen, Jens; Baker, Scott E.

    In: Genome Research, Vol. 21, No. 6, 2011, p. 885-897.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  122. Published

    Course on Advanced Analytical Chemistry and Chromatography. / Andersen, Jens Enevold Thaulov; Fristrup, Peter; Nielsen, Kristian Fog; Hägglund, Per; Sloth, Jens Jørgen; Jankova Atanasova, Katja.

    In: 7th International CDIO Conference 2011. Technical University of Denmark, 2011.

    Publication: Research - peer-review › Conference abstract in proceedings – Annual report year: 2011

  123. Published

    Dereplication of Microbial Natural Products by LC-DAD-TOFMS. / Nielsen, Kristian Fog; Månsson, Maria; Rank, Christian; Frisvad, Jens Christian; Larsen, Thomas Ostenfeld.

    In: Journal of Natural Products, Vol. 74, No. 11, 2011, p. 2338-2348.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  124. Published

    Distribution of sterigmatocystin in filamentous fungi. / Rank, Christian; Nielsen, Kristian Fog; Larsen, Thomas Ostenfeld; Varga, Janos; Samson, Rob A.; Frisvad, Jens Christian.

    In: Fungal Biology, Vol. 115, No. 4-5, 2011, p. 406-420.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  125. Published

    Diversion of flux toward sesquiterpene production in Saccharomyces cerevisiae by fusion of host and heterologous enzymes.. / Albertsen, Line; Chen, Yun; Bach, Lars Stougaard; Rattleff, Stig; Maury, Jerome; Pedersen, Susanne Brix; Nielsen, Jens; Mortensen, Uffe Hasbro.

    In: Applied and Environmental Microbiology, Vol. 77, No. 3, 2011, p. 1033-1040.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  126. Published

    Effect of kinetic parameters on heterologous protein production: a sysbio approach. / Nandy, Subir Kumar; Rattleff, Stig; Thykær, Jette; Eliasson Lantz, Anna.

    2011. Poster session presented at 6th Danish Conference on Biotechnology and Molecular Biology, Vejle, Denmark.

    Publication: Research - peer-review › Poster – Annual report year: 2011

  127. Published

    Effect of organic acids on growth of Aspergillus carbonarius and production of ochratoxin A. / Copetti, M. V.; Lamanaki, B.T.; Frisvad, Jens Christian; Taniwaki, M.H.

    2011. Poster session presented at 26th Congresso Brasileiro Microbiologia, Foz do Iguazu, Brazil.

    Publication: Research - peer-review › Poster – Annual report year: 2011

  128. Published

    Engineering the spatial organization of metabolic pathways. / Albertsen, Line; Maury, Jerome; Bach, Lars Stougaard; Nielsen, Jens; Mortensen, Uffe Hasbro.

    2011. Abstract from 6th Danish Conference on Biotechnology and Molecular Biology, Vejle, Denmark.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  129. Published

    Exo-metabolome of some fungal isolates growing on cork-based medium. / Barreto, M. C.; Frisvad, Jens Christian; Larsen, Thomas Ostenfeld; Mogensen, Jesper; San-Romão, Maria Vitória.

    In: European Food Research and Technology, Vol. 232, No. 4, 2011, p. 575-582.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  130. Published

    Experimental methods and modeling techniques for description of cell population heterogeneity. / Lencastre Fernandes, Rita; Nierychlo, M.; Lundin, L.; Pedersen, Anne Egholm; PuentesTellez, P. E.; Dutta, A.; Carlqvist, Magnus; Bolic, Andrijana; Schäpper, Daniel; Brunetti, Anna Chiara; Helmark, Søren; Heins, Anna-Lena; Jensen, Anker Degn; Nopens, I.; Rottwitt, Karsten; Szita, Nicolas; van Elsas, J. D.; Nielsen, P. H.; Martinussen, Jan; Sørensen, S. J.; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Biotechnology Advances, Vol. 29, No. 6, 2011, p. 575-599.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  131. Published

    Exploring a Global Collection of Marine Bacteria for new Antibacterial Compounds : Oral presentation. / Månsson, Maria; Nielsen, Kristian Fog; Gram, Lone; Larsen, Thomas Ostenfeld.

    2011. Abstract from 13th International Symposium on Marine Natural Products, Phuket, Thailand, 17-22 Oct, .

    Publication: Research › Conference abstract for conference – Annual report year: 2011

  132. Published

    Expression of enzymatically inactive wasp venom phospholipase A1 in Pichia pastoris. / Borodina, Irina; Jensen, Bettina M.; Wagner, Tim; Abou Hachem, Maher; Søndergaard, Ib; Poulsen, Lars Kærgaard.

    2011. Abstract from 6th Danish Conference on Biotechnology and Molecular Biology, Vejle, Denmark.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  133. Published

    Expression of Enzymatically Inactive Wasp Venom Phospholipase A1 in Pichia pastoris. / Borodina, Irina; Jensen, Bettina M.; Wagner, Tim; Abou Hachem, Maher; Søndergaard, Ib; Poulsen, Lars Kærgaard.

    In: P L o S One, Vol. 6, No. 6, 2011, p. e21267.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  134. Published

    Fed-batch production of hydrophobin RodB from Aspergillus fumigatus in host Pichia pastoris. / Pedersen, Mona Højgaard; Borodina, Irina; Frisvad, Jens Christian; Søndergaard, Ib.

    2011. Abstract from Biofilms in Nosocomial Fungal Infections : ESCMID Postgraduate Education Course, Paris, France, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  135. Published

    Fed-batch production of the hydrophobins RodA and RodB from Aspergillus fumigatus in host Pichia pastoris. / Pedersen, Mona Højgaard; Borodina, Irina; Frisvad, Jens Christian; Søndergaard, Ib.

    2011. Abstract from 26th Fungal Genetics Conference, Asilomar, CA, United States.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  136. Published

    Fleming's penicillin producing streain is not Penicillium chrysogenum but P. rubens. / Houbraken, Jos; Frisvad, Jens Christian; Samson, Robert A.

    In: I M A Fungus, Vol. 2, No. 1, 2011, p. 87-95.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  137. Published

    Flux coupling and transcriptional regulation within the metabolic network of the photosynthetic bacterium Synechocystis sp. PCC6803. / Montagud, Arnau; Zelezniak, Aleksej; Navarro, Emilio; de Córdoba, Pedro Fernández; Urchueguía, Javier F.; Patil, Kiran Raosaheb.

    In: Biotechnology Journal, Vol. 6, No. 3, 2011, p. 330-342.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  138. Published

    Food and soil-borne Penicillia in Arctic environments: Chemical diversity. / Frisvad, Jens Christian (Invited author).

    2011. Abstract from Polar and Alpine Microbiology, Ljubljana, Slovenia, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  139. Published

    Formation of cereulide and enterotoxins by Bacillus cereus in fermented African locust beans. / Thorsen, Line; Azokpota, Paulin; Munk Hansen, Bjarne; Rønsbo, Mie Hvillum; Nielsen, Kristian Fog; Hounhouigan, D. Joseph; Jakobsen, Mogens.

    In: Food Microbiology, Vol. 28, No. 8, 2011, p. 1441-1447.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  140. Published

    Forsøg med enkeltkerne-analyser af majs fra Sydafrika. / Nielsen, Kristian Fog; Iversen, Anita.

    In: Dansk Kemi, Vol. 92, No. 9, 2011.

    Publication: Research › Journal article – Annual report year: 2012

  141. Published

    Fumonisin and Ochratoxin Production in Industrial Aspergillus niger Strains. / Frisvad, Jens Christian; Larsen, Thomas Ostenfeld; Thrane, Ulf; Meijer, Martin; Varga, Janos; Samson, Robert A.; Nielsen, Kristian Fog.

    In: P L o S One, Vol. 6, No. 8, 2011, p. e23496.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  142. Published

    Fumonisin from Aspergillus niger in grapes and derived products. / Mogensen, Jesper Mølgaard; Knudsen, Peter Boldsen; Frisvad, Jens Christian; Larsen, Thomas Ostenfeld; Nielsen, Kristian Fog.

    2011. Poster session presented at 32nd Mycotoxin Workshop, Kgs. Lyngby, Denmark.

    Publication: Research - peer-review › Poster – Annual report year: 2011

  143. Published

    Fumonisins from Aspergillus niger in grapes and derived products. / Mogensen, Jesper Mølgaard; Knudsen, Peter Boldsen; Larsen, Thomas Ostenfeld; Frisvad, Jens Christian; Thrane, Ulf; Nielsen, Kristian Fog.

    2011. Poster session presented at The MycoRed Africa Conference, Cape Town, South Africa, .

    Publication: Research - peer-review › Poster – Annual report year: 2011

  144. Published

    Fumonisins in Aspergillus niger: Industrial and food aspects. / Frisvad, Jens Christian; Nielsen, Kristian Fog; Mogensen, Jesper; Thrane, Ulf; Larsen, Thomas Ostenfeld.

    2011. Abstract from 26th Fungal Genetics Conference, Asilomar, CA, United States.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  145. Published

    Fumonisins in South African subsistence maize - A single kernel approach. / Mogensen, Jesper Mølgaard; Sørensen, Stine Mørcholdt; Sulyok, Michael; Shephard, Gordon; van der Westhuizen, Liana; Frisvad, Jens Christian; Thrane, Ulf; Krska, Rudolf; Nielsen, Kristian Fog.

    2011. Poster session presented at The MycoRed Africa Conference, Cape Town, South Africa, .

    Publication: Research - peer-review › Poster – Annual report year: 2011

  146. Published

    Fungal metabolomics. / Frisvad, Jens Christian (Invited author).

    2011. Paper presented at 26th Congresso Brasileiro Microbiologia, Foz do Iguazu, Brazil.

    Publication: Research - peer-review › Paper – Annual report year: 2011

  147. Published

    (+)-Geodin from Aspergillus terreus.. / Rønnest, Mads Holger; Nielsen, Morten Thrane; Leber, Blanka; Mortensen, Uffe Hasbro; Krämer, Alwin; Clausen, Mads Hartvig; Larsen, Thomas Ostenfeld; Harris, Pernille.

    In: Acta Crystallographica. Section C: Crystal Structure Communications, Vol. 67, No. Pt 3, 2011, p. o125-o128.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  148. Published

    Gradient simulation experiments for targeting population heterogeneity in continuous Saccharomyces cerevisiae fermentation. / Heins, Anna-Lena; Lencastre Fernandes, Rita; Lundin, L.; Carlquist, M.; Sörensen, S.; Gernaey, Krist; Eliasson Lantz, Anna.

    2011. Abstract from Recent Advances in Fermentation Technology, Marco Island, Florida, USA, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  149. Published

    Hesseltins B–G, novel meroterpenoids from a new Penicillium species. / Phipps, Richard Kerry; Gotfredsen, Charlotte Held; Paludan, Søren R.; Frisvad, Jens Christian; Eriksen, Kathrine; Petersen, Bent O.; Duus, Jens Ø.; Larsen, Thomas Ostenfeld.

    In: Tetrahedron Letters, Vol. 52, No. 5, 2011, p. 598-601.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  150. Published

    Heterogeneous Microbial Populations: using flow cytometric data for building dynamic distributed models. / Lencastre Fernandes, Rita; Carlquist, M.; Lundin, L.; Heins, Anna-Lena; Dutta, Abhishek; Nopens, I.; Johansen, Søren J.; Jensen, Anker Degn; Eliasson Lantz, Anna; Gernaey, Krist.

    2011. Abstract from 8th European Congress of Chemical Engineering, Berlin, Germany.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  151. Published

    Heterogeneous Microbial Populations: Using Flow Cytometric Data for Building Dynamic Distributed Models. / Lencastre Fernandes, Rita; Carlquist, Magnus; Lundin, Luisa; Heins, Anna-Lena; Dutta, Abhishek; Nopens, Ingmar; Jensen, Anker Degn; Johansen, Søren J.; Eliasson Lantz, Anna; Gernaey, Krist.

    2011. Abstract from 2011 AIChE Annual Meeting, Minneapolis, MN, United States.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  152. Published

    Heterologous expression of polyketides in fungi and optimization by an in silico guided approach. / Mølgaard, Louise; Hansen, Bjarne Gram; Nielsen, Jakob Blæsbjerg; Patil, Kiran Raosaheb; Thykær, Jette; Mortensen, Uffe Hasbro.

    2011. Poster session presented at Conference on Synthetic Biology and Cell Factories, Vejle, Danmark, .

    Publication: Research - peer-review › Poster – Annual report year: 2011

  153. Published

    High-yield production of hydrophobins RodA and RodB from Aspergillus fumigatus in Pichia pastoris. / Pedersen, Mona Højgaard; Borodina, Irina; Moresco, Jacob Lange; Svendsen, Winnie Edith; Frisvad, Jens Christian; Søndergaard, Ib.

    In: Applied Microbiology and Biotechnology, Vol. 90, No. 6, 2011, p. 1923-1932.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  154. Published

    Hypersaline waters - a potential source of foodborne toxigenic aspergilli and penicillia. / Butinar, Lorena; Frisvad, Jens Christian; Gunde-Cimerman, Nina.

    In: F E M S Microbiology Ecology, Vol. 77, No. 1, 2011, p. 186-199.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  155. Published

    Implications of high-temperature events and water deficits on protein profiles in wheat (Triticum aestivum L. cv. Vinjett) grain. / Yang, Fen; Jørgensen, Anders Dysted; Li, Huawei; Søndergaard, Ib; Finnie, Christine; Svensson, Birte; Jiang, Dong; Wollenweber, Bernd; Jacobsen, Susanne.

    In: Proteomics, Vol. 11, No. 9, Sp. Iss. SI, 2011, p. 1684-1695.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  156. Published

    Increased isobutanol production in Saccharomyces cerevisiae by overexpression of genes in valine metabolism. / Chen, Xiao; Nielsen, Kristian Fog; Borodina, Irina; Kielland-Brandt, Morten; Karhumaa, Kaisa.

    In: Biotechnology for Biofuels, Vol. 4, No. 1, 2011, p. 21.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  157. Published

    Inhibition of Virulence Gene Expression in Staphylococcus aureus by Novel Depsipeptides from a Marine Photobacterium. / Månsson, Maria; Nielsen, Anita; Kjærulff, Louise; Gotfredsen, Charlotte Held; Wietz, Matthias; Ingmer, Hanne; Gram, Lone; Larsen, Thomas Ostenfeld.

    In: Marine Drugs, No. 9, 2011, p. 2537.2552.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  158. Published

    Introducing process analytical technology (PAT) in filamentous cultivation process development: comparison of advanced online sensors for biomass measurement. / Rønnest, Nanna Petersen; Stocks, Stuart M.; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Journal of Industrial Microbiology and Biotechnology, Vol. 38, No. 10, 2011, p. 1679-1690.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  159. Published

    In vitro cytotoxicity of fungi spoiling maize silage. / Rasmussen, Rie Romme; Rasmussen, Peter Have; Larsen, Thomas Ostenfeld; Bladt, Tanja Thorskov; Binderup, Mona-Lise.

    In: Food and Chemical Toxicology, Vol. 49, No. 1, 2011, p. 31-44.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  160. Published

    Mapping of polyketide biosynthesis pathways in Aspergillus nidulans using a genome wide PKS gene deletion library. / Larsen, Thomas Ostenfeld; Rank, Christian; Klejnstrup, Marie Louise; Nielsen, Jakob Blæsbjerg; Holm, Dorte Koefoed; Brogaard, Katrine Husted; Hansen, Bjarne Gram; Frisvad, Jens Christian; Mortensen, Uffe Hasbro.

    2011. Abstract from 26th Fungal Genetics Conference, Asilomar, CA, United States.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  161. Published

    Marine Vibrionaceae as a source of bioactive natural products. / Månsson, Maria; Wietz, Matthias; Gram, Lone; Larsen, Thomas Ostenfeld.

    2011. Abstract from The 7th European Conference on Marine Natural Products, Strömstad, Sweden, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  162. Published

    Modeling the Residence Time Distribution In a Batch Fermentor: Comparison of CFD Prediction with Experiment. / Dutta, Abhishek; Lencastre Fernandes, Rita; Heins, Anna-Lena; Eliasson Lantz, Anna; Jensen, Anker Degn; Gernaey, Krist; Nopens, Ingmar.

    2011. Abstract from 2011 AIChE Annual Meeting, Minneapolis, MN, United States.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  163. Published

    Modulation of transcription factors : A metabolic engineering strategy for improving Aspergillus niger as a production host. / Poulsen, Lars; Bruno, K. S.; Andersen, Mikael Rørdam; Eliasson Lantz, Anna; Baker, S. E.; Thykær, Jette.

    2011. Abstract from 4th Conference on Physiology of Yeast and Filamentous Fungi, Rotterdam, Netherlands.

    Publication: Research › Conference abstract for conference – Annual report year: 2011

  164. Published

    Molecular Basis for Mycophenolic Acid Biosynthesis in Penicillium brevicompactum. / Regueira, Torsten Ulrik Bak; Kildegaard, Kanchana Rueksomtawin; Hansen, Bjarne Gram; Mortensen, Uffe Hasbro; Hertweck, Christian; Nielsen, Jens.

    In: Applied and Environmental Microbiology, Vol. 77, No. 9, 2011, p. 3035-3043.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  165. Published

    Mug er smuk : men ikke på dine vægge. / Andersen, Birgitte.

    In: Aktuel Naturvidenskab, Vol. 4, 2011, p. 6-9.

    Publication: Communication › Journal article – Annual report year: 2011

  166. Published

    Multi-objective optimization of glycopeptide antibiotic production in batch and fed batch processes. / Maiti, Soumen K.; Eliasson Lantz, Anna; Bhushan, Mani; Wangikar, Pramod P.

    In: Bioresource Technology, Vol. 102, No. 13, 2011, p. 6951-6958.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  167. Published

    Mycobiota of cocoa: From farm to chocolate. / Copetti, Marina V.; Iamanaka, Beatriz T.; Frisvad, Jens Christian; Pereira, José L.; Taniwaki, Marta H.

    In: Food Microbiology, Vol. 28, No. 8, 2011, p. 1499-1504.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  168. Published

    Mycotoxins in building materials. / Nielsen, Kristian Fog; Frisvad, Jens Christian.

    In: Fundamentals of mold growth in indoor environments and strategies for healthy living. Wageningen Academic Publishers, 2011. p. 245-275.

    Publication: Research - peer-review › Book chapter – Annual report year: 2011

  169. Published

    New and revisited species in Aspergillus section Nigri. / Varga, J.; Frisvad, Jens Christian; Kocsube, S.; Brankovics, B.; Tóth, B.; Szigeti, G.; Samson, R. A.

    In: Studies in Mycology, No. 69, 2011, p. 1-17.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  170. Published

    New species in Aspergillus section Terrei. / Samson, R. A.; Peterson, S. W.; Frisvad, Jens Christian; Varga, J.

    In: Studies in Mycology, No. 69, 2011, p. 39-55.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  171. Published

    New taxa in Aspergillus section Usti. / Samson, R. A.; Varga, J.; Meijer, M.; Frisvad, Jens Christian.

    In: Studies in Mycology, Vol. 69, No. 1, 2011, p. 81-97.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  172. Published

    Ny generation af analyseteknik. / Nielsen, Kristian Fog; Iversen, Anita.

    In: Dansk Kemi, Vol. 92, No. 9, 2011, p. 16-19.

    Publication: Research › Journal article – Annual report year: 2012

  173. Published

    Occurrence of Furnonisins B2 and B4 in Retail Raisins. / Knudsen, Peter Boldsen; Mogensen, Jesper Mølgaard; Larsen, Thomas Ostenfeld; Nielsen, Kristian Fog.

    In: Journal of Agricultural and Food Chemistry, Vol. 59, No. 2, 2011, p. 772-776.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  174. Published

    One name for each fungal species?. / Frisvad, Jens Christian.

    2011. Poster session presented at CBS Symposium One Fungus One Name (1F = 1N), Amsterdam, the Netherlands, .

    Publication: Research - peer-review › Poster – Annual report year: 2011

  175. Published

    Penicillium araracuarense sp. nov., Penicillium elleniae sp. nov., Penicillium penarojense sp. nov., Penicillium vanderhammenii sp. nov. and Penicillium wotroi sp. nov., isolated from leaf litter. / Houbraken, Jos; López-Quintero, Carlos A.; Frisvad, Jens Christian; Boekhout, Teun; Theelen, Bart; Franco-Molano, Ana Esperanza; Samson, Robert A.

    In: International Journal of Systematic and Evolutionary Microbiology, Vol. 61, No. Pt 6, 2011, p. 1462-1475.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  176. Published

    Phenotypic characterisation of Aspergillus niger strains in submerged cultivation and at the single cell level. / Workman, Mhairi.

    2011. Paper presented at Analysis of Microbial Cells at the Single Cell Level, Carry-le-Rouet, France, .

    Publication: Research › Paper – Annual report year: 2011

  177. Published

    Phenotypic identification of Aspergillus westerdijkiae and closely related species. / Yilmaz, N.; Meijer, M.; Houbraken, J.; Frisvad, Jens Christian; Samson, R. A.

    2011. Paper presented at The unlimited world of microbes. XIII International Congress of Mycology, Sapporo, Japan, .

    Publication: Research - peer-review › Paper – Annual report year: 2011

  178. E-pub ahead of print

    PHUSER (Primer Help for USER): a novel tool for USER fusion primer design. / Olsen, Lars Rønn; Hansen, Niels Bjørn; Bonde, Mads; Genee, Hans Jasper; Holm, Dorte Marie Koefoed; Carlsen, Simon; Hansen, Bjarne Gram; Patil, Kiran Raosaheb; Mortensen, Uffe Hasbro; Wernersson, Rasmus.

    In: Nucleic Acids Research, Vol. 39, No. Web Server issue, 2011, p. W61-W67.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  179. Published

    Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium. / Samson, R.A.; Yilmaz, N.; Houbraken, J.; Spierenburg, H.; Seifert, K.A.; Peterson, S.W.; Varga, J.; Frisvad, Jens Christian.

    In: Studies in Mycology, Vol. 70, 2011, p. 159-184.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  180. Published

    Production of alcohol-based quorum sensing molecules and their role in biofilm formation and sliding motility of the dairy-important yeast Debaryomyces hansenii. / Gori, Klaus; Knudsen, Peter Boldsen; Nielsen, Kristian Fog; Arneborg, Nils; Jespersen, Lene.

    2011. Poster session presented at 4th Conference on Physiology of Yeast and Filamentous Fungi, Rotterdam, Netherlands.

    Publication: Research - peer-review › Poster – Annual report year: 2011

  181. Published

    Production of bioactive secondary metabolites by marine Vibrionaceae. / Månsson, Maria; Gram, Lone; Larsen, Thomas Ostenfeld.

    In: Marine Drugs, No. 9, 2011, p. 1440-1468.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  182. Published

    Production of fumonisins B2 and B4 in Tolypocladium species. / Mogensen, Jesper Mølgaard; Møller, Kirsten Amalie; von Freiesleben, Pernille; Labuda, Roman; Varga, Elisabeth; Sulyok, Michael; Kubátová, Alena; Thrane, Ulf; Andersen, Birgitte; Nielsen, Kristian Fog.

    In: Journal of Industrial Microbiology and Biotechnology, Vol. 38, No. 9, 2011, p. 1329-1335.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  183. Published

    Protein glycosylation: Analysis, Characterization, and Engineering. / Andersen, Mikael Rørdam; Nam, Jong Hyun; Sharfstein, Susan T.

    In: Encyclopedia of Industrial Biotechnology, Bioprocess, Bioseparation, and Cell Technology. John Wiley & Sons Ltd, 2011.

    Publication: Research - peer-review › Book chapter – Annual report year: 2011

  184. Published

    Qualified presumption of safety (QPS): a generic risk assessment approach for biological agents notified to the European Food Safety Authority (EFSA) (vol 21, pg 425, 2010). / Leuschner, R. G. K.; Robinson, T. P.; Hugas, M.; Cocconcelli, P. S.; Richard-Forget, F.; Kleine, G.; Licht, Tine Rask; Nguyen-The, C.; Querol, A.; Richardson, M.; Suarez, J. E.; Thrane, Ulf; Vlak, J. M.; von Wright, A.

    In: Trends in Food Science & Technology, Vol. 22, No. 1, 2011, p. 51-52.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  185. Published

    Quorum sensing in Aeromonas salmonicida subsp. achromogenes and the effect of the autoinducer synthase AsaI on bacterial virulence. / Schwenteit, Johanna; Gram, Lone; Nielsen, Kristian Fog; Fridjonsson, Olafur H.; Bornscheuer, Uwe T.; Givskov, Michael; Gudmundsdottir, Bjarnheidur K.

    In: Veterinary Microbiology, Vol. 147, No. 3-4, 2011, p. 389.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  186. Published

    Rationale for a polyphasic approach in the identification of mycotoxigenic fungi. / Frisvad, Jens Christian.

    In: Determining mycotoxins and mycotoxigenic fungi in food and feed. ed. / S. De Saeger. Oxford : Woodhead Publishing, 2011. p. 279-297.

    Publication: Research - peer-review › Book chapter – Annual report year: 2011

  187. Published

    Resistance and Tolerance to Tropodithietic Acid, an Antimicrobial in Aquaculture, Is Hard To Select. / Porsby, Cisse Hedegaard; Webber, Mark A.; Nielsen, Kristian Fog; Piddock, Laura J. V.; Gram, Lone.

    In: Antimicrobial Agents and Chemotherapy, Vol. 55, No. 4, 2011, p. 1332-1337.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  188. Published

    Rumlig organisering af enzymer øger cellefabrikkers effektivitet. / Albertsen, Line; Mortensen, Uffe Hasbro.

    In: Dansk Kemi, Vol. 92, No. 3, 2011, p. 22-25.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  189. Published

    Salting of dry-cured meat – A potential cause of contamination with the ochratoxin A-producing species Penicillium nordicum. / Sonjak, Silva; Ličen, Mia; Frisvad, Jens Christian; Gunde-Cimerman, Nina.

    In: Food Microbiology, Vol. 28, No. 6, 2011, p. 1111-1116.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  190. Published

    Screening and dereplication of microbial natural products extracts. / Månsson, Maria; Vynne, Nikolaj Grønnegaard; Wietz, Matthias; Gram, Lone; Nielsen, Kristian Fog; Larsen, Thomas Ostenfeld.

    2011. Abstract from The American Society of Pharmacognosy Annual Meeting, San Diego, California, USA, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  191. Published

    Secondary metabolites of Aspergillus and Penicillium. / Frisvad, Jens Christian.

    2011. Paper presented at Polyphasic identification of filamentous fungi in the genera Aspergillus and Penicillium with biotechnological applications, Sao Paolo, Brazil, .

    Publication: Research - peer-review › Paper – Annual report year: 2011

  192. Published

    Sensitivity to Lovastatin of Saccharomyces cerevisiae Strains Deleted for Pleiotropic Drug Resistance (PDR) Genes. / Formenti, Luca Riccardo; Kielland-Brandt, Morten.

    In: Journal of Molecular Microbiology and Biotechnology, Vol. 20, No. 4, 2011, p. 191-195.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  193. Published

    Single-kernel analysis of fumonisins and other fungal metabolites in maize from South African subsistence farmers.. / Mogensen, Jesper Mølgaard; Sørensen, S.M.; Sulyok, M.; van der Westhuizen, L.; Shephard, G. S.; Frisvad, Jens Christian; Thrane, Ulf; Krska, R.; Nielsen, Kristian Fog.

    In: Food Additives & Contaminants: Part A - Chemistry, Analysis, Control, Exposure & Risk Assessment, Vol. 28, No. 12, 2011, p. 1724-1734.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  194. Published

    Submerged Conidiation and Product Formation by Aspergillus niger at Low Specific Growth Rates Are Affected in Aerial Developmental Mutants. / Jørgensen, Thomas R.; Nielsen, Kristian Fog; Arentshorst, Mark; Park, JooHae; van den Hondel, Cees A.; Frisvad, Jens Christian; Ram, Arthur F.

    In: Applied and Environmental Microbiology, Vol. 77, No. 15, 2011, p. 5270-5277.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  195. Published

    Suppression of Aspergillus by Pseudomonas aeruginosa. / Jensen, Britt Guillaume; Jelsbak, Lars; Søndergaard, Ib; Frisvad, Jens Christian; Nielsen, Kristian Fog.

    2011. Abstract from Biofilms in Nosocomial Fungal Infections, Paris, France, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  196. Published

    Targeted Disruption of Nonribosomal Peptide Synthetase pes3 Augments the Virulence of Aspergillus fumigatus. / O'Hanlon, Karen A.; Cairns, Timothy; Stack, Deirdre; Schrettl, Markus; Bignell, Elaine M.; Kavanagh, Kevin; Miggin, Sinéad M.; O'Keeffe, Grainne; Larsen, Thomas Ostenfeld; Doyle, Sean.

    In: Infection and Immunity, Vol. 79, No. 10, 2011, p. 3978-3992.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  197. Published

    Targeting population heterogeneity for optimal cell factories. / Heins, Anna-Lena; Carlqvist, Magnus; Helmark, S.; Lencastre Fernandes, Rita; Gernaey, Krist; Eliasson Lantz, Anna.

    2011. Abstract from LMC Congress : Food in Front, Odense, Denmark, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  198. Published

    Targeting population heterogeneity in Saccharomyces cerevisiae batch fermentation for optimal cell factories. / Heins, Anna-Lena; Lencastre Fernandes, Rita; Lundin, L.; Carlqvist, Magnus; Sörensen, S.; Gernaey, Krist; Eliasson Lantz, Anna.

    2011. Abstract from 6th Danish Conference on Biotechnology and Molecular Biology, Vejle, Denmark.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  199. Published

    Taxonomic studies of the Penicillium glabrum complex and the description of a new species P. subericola. / Barreto, M. C.; Houbraken, J.; Samson, R. A.; Frisvad, Jens Christian; San-Romão, M. V.

    In: Fungal Diversity, Vol. 49, No. 1, 2011, p. 23-33.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  200. Published

    Taxonomic studies on the genus Aspergillus. / Samson, Robert A. (Editor); Varga, János (Editor); Frisvad, Jens Christian (Editor).

    CBS-KNAW Fungal Biodiversity Centre, 2011. (Studies in Mycology).

    Publication: Research - peer-review › Book – Annual report year: 2011

  201. Published

    Taxonomy of Penicillium section Citrina. / Houbraken, Jos; Frisvad, Jens Christian; Samson, R.A.

    In: Studies in Mycology, Vol. 70, 2011, p. 53-138.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  202. Published

    The Amstersam declaration on fungal nomenclature. / Hawksworth, David L.; Crous, Pedro W.; Redhead, Scott A.; Reynolds, Don R.; Samson, Robert A.; Seifert, Keith A.; Taylor, John W.; Wingfield, Michael J.; Abaci, Özlem; Aime, Catherine; Frisvad, Jens Christian.

    In: I M A Fungus, Vol. 2, No. 1, 2011, p. 105-112.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  203. Published

    The chemical heritage of Aspergillus flavus in A. oryzae RIB 40. / Rank, Christian; Klejnstrup, Marie Louise; Petersen, Lene Maj; Frisvad, Jens Christian; Larsen, Thomas Ostenfeld.

    2011. Abstract from 26th Fungal Genetics Conference, Asilomar, CA, United States.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  204. Published

    The genomic sequence of the Chinese hamster ovary (CHO)-K1 cell line. / Xu, Xun; Pan, Shengkai; Liu, Xin; Chen, Wenbin; Xie, Min; Wang, Wenliang; Wang, Jun; Nagarajan, Harish; Lewis, Nathan E.; Famili, Iman; Palsson, Bernhard O.; Cai, Zhiming; Gui, Yaoting; Hammond, Stephanie; Lee, Kelvin H.; Andersen, Mikael Rørdam; Neff, Norma; Passarelli, Benedetto; Koh, Winston; Fan, H. Christina; Wang, Jianbin; Quake, Stephen R.; Betenbaugh, Michael; Palsson, Bernhard; Wang, Jun.

    In: Nature Biotechnology, Vol. 29, No. 8, 2011, p. 735-741.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  205. Published

    The interplay of descriptor-based computational analysis with pharmacophore modeling builds the basis for a novel classification scheme for feruloyl esterases. / Udatha, D.B.R.K. Gupta; Kouskoumvekaki, Irene; Olsson, Lisbeth; Panagiotou, Gianni.

    In: Biotechnology Advances, Vol. 29, No. 1, 2011, p. 94-110.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  206. Published

    The molecular and genetic basis of conidial pigmentation in Aspergillus niger. / Jørgensen, Thomas R.; Park, Joohae; Arentshorst, Mark; van Welzen, Anne Marie; Lamers, Gerda; vanKuyk, Patricia A.; Damveld, Robbert A.; van den Hondel, Cees A.M.; Nielsen, Kristian Fog; Frisvad, Jens Christian; Ram, Arthur F. J.

    In: Fungal Genetics and Biology, Vol. 48, No. 5, 2011, p. 544-553.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  207. Published

    The mycobiota of three dry-cured meat products from Slovenia. / Sonjak, Silva; Ličen, Mia; Frisvad, Jens Christian; Gunde-Cimerman, Nina.

    In: Food Microbiology, Vol. 28, No. 3, 2011, p. 373-376.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  208. Published

    The Role of Top-down Attention in the Cocktail Party: Revisiting Cherry's Experiment after Sixty Years. / Marchegiani, Letizia; Karadogan, Seliz; Andersen, Taja; Larsen, Jacob Norby; Hansen, Lars Kai; Dillon, Tharam; Ishbuchi, Hisao; Wani, Arif M.

    In: Tenth International Conference on Machine Learning and Applications. 2011.

    Publication: Research - peer-review › Article in proceedings – Annual report year: 2012

  209. Published

    Topology optimized microbioreactors. / Schäpper, Daniel; Lencastre Fernandes, Rita; Eliasson Lantz, Anna; Okkels, Fridolin; Bruus, Henrik; Gernaey, Krist.

    In: Biotechnology and Bioengineering (Print), Vol. 108, No. 4, 2011, p. 786-796.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  210. Published

    Toxigenic fungi. / Frisvad, Jens Christian.

    2011. Paper presented at Polyphasic identification of filamentous fungi in the genera Aspergillus and Penicillium with biotechnological applications, Sao Paolo, Brazil, .

    Publication: Research - peer-review › Paper – Annual report year: 2011

  211. Published

    "Tropical" diversity of Penicillium spp. in water-related polar environments. / Sonjaka, Silva; Frisvad, Jens Christian; Gunde-Cimermana, Nina.

    2011. Abstract from Polar and Alpine Microbiology, Ljubljana, Slovenia, Ljubljana, Slovenia, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  212. Published

    Two new aflatoxin producing species, and an overview of Aspergillus section Flavi. / Varga, J.; Frisvad, Jens Christian; Samson, R. A.

    In: Studies in Mycology, Vol. 69, No. 1, 2011, p. 57-80.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  213. Published

    Two novel classes of enzymes are required for the biosynthesis of aurofusarin in Fusarium graminearum. / Frandsen, Rasmus John Normand; Schütt, Claes; Lund, Birgitte W.; Staerk, Dan; Nielsen, John; Olsson, Stefan; Giese, Henriette.

    In: Journal of Biological Chemistry, Vol. 286, No. 12, 2011, p. 10419-10428.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  214. Published

    Uniform and reproducible stirring in a microbioreactor. / Bolic, Andrijana; Eliasson Lantz, Anna; Rottwitt, Karsten; Gernaey, Krist.

    2011. Abstract from 8th European Congress of Chemical Engineering, Berlin, Germany.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  215. Published

    Versatile Enzyme Expression and Characterization System for Aspergillus nidulans, with the Penicillium brevicompactum Polyketide Synthase Gene from the Mycophenolic Acid Gene Cluster as a Test Case. / Hansen, Bjarne Gram; Salomonsen, Bo; Nielsen, Morten Thrane; Nielsen, Jakob Blæsbjerg; Hansen, Niels Bjørn; Nielsen, Kristian Fog; Regueira, Torsten Ulrik Bak; Nielsen, Jens; Patil, Kiran Raosaheb; Mortensen, Uffe Hasbro.

    In: Applied and Environmental Microbiology, Vol. 77, No. 9, 2011, p. 3044-3051.

    Publication: Research - peer-review › Journal article – Annual report year: 2011

  216. Published

    Why are Aspergilli so different in their expression of secondary metabolites from section to section?. / Frisvad, Jens Christian (Invited author); Rank, Christian (Invited author); Larsen, Thomas Ostenfeld (Invited author).

    2011. Abstract from 26th Fungal Genetics Conference, Asilomar, CA, United States.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2011

  217. 2010
  218. Published

    Analysis of Multivariate Sensor Data for Monitoring of Cultivations. / Petersen, Nanna; Gernaey, Krist (Supervisor); Eliasson Lantz, Anna (Supervisor); Stocks, Stuart (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010.

    Publication: Research › Ph.d. thesis – Annual report year: 2010

  219. Published

    Continuous Culture Microbioreactors. / Schäpper, Daniel; Gernaey, Krist (Supervisor); Eliasson Lantz, Anna (Supervisor); Stocks, Stuart (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010.

    Publication: Research › Ph.d. thesis – Annual report year: 2010

  220. Published

    Mycotoxins in maize silage - detection of toxins and toxicological aspects. / Rasmussen, Rie Romme; Binderup, Mona-Lise (Supervisor); Larsen, Thomas Ostenfeld (Supervisor); Rasmussen, Peter Have (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010.

    Publication: Research › Ph.d. thesis – Annual report year: 2010

  221. Published

    Functional Genomics of Streptomyces Coelicolor. / Sohoni, Sujata Vijay; Mijakovic, Ivan (Supervisor); Eliasson Lantz, Anna (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010.

    Publication: Research › Ph.d. thesis – Annual report year: 2010

  222. Published

    Mapping of Secondary Metabolism in Biotechnologically Important aspergillus Species. / Rank, Christian; Larsen, Thomas Ostenfeld (Supervisor); Gotfredsen, Charlotte Held (Supervisor); Frisvad, Jens Christian (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010.

    Publication: Research › Ph.d. thesis – Annual report year: 2010

  223. Published

    Modeling and Design of Novel Bioreactors and Fermentation Processes. / Kold, David; Hobley, Timothy John (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010.

    Publication: Research › Ph.d. thesis – Annual report year: 2010

  224. Published

    Measurement and Chemometric Modelling of streptomyces Cultivations. / Ödman, Peter; Johansen, Claus Lindvald (Supervisor); Gernaey, Krist (Supervisor); Olsson, Lisbeth (Supervisor); Eliasson Lantz, Anna (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010.

    Publication: Research › Ph.d. thesis – Annual report year: 2010

  225. Published

    Engineering the spatial organization of metabolic payhways : -a new approach for optimization of cell factories. / Albertsen, Line; Mortensen, Uffe Hasbro (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010. 120 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2010

  226. Published

    Investigating the Functions and Dynamics of DNA Repair Centers. / Hallwyl, Swee Chuang Lim; Mortensen, Uffe Hasbro (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2010.

    Publication: Research › Ph.d. thesis – Annual report year: 2010

  227. Published

    Alternaria cerasidanica sp nov., isolated in Denmark from drupes of Prunus avium. / Roberts, R. G.; Reymond, S. T.; Andersen, Birgitte.

    In: Mycotaxon, Vol. 111, 2010, p. 175-182.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  228. Published

    Amino acid residues involved in ligand preference of the Snf3 transporter-like sensor in Saccharomyces cerevisiae. / Dietvorst, J.; Karhumaa, Kaisa; Kielland-Brandt, Morten; Brandt, A.

    In: Yeast, Vol. 27, No. 3, 2010, p. 131-138.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  229. Published

    Antibacterial compounds from marine Vibrionaceae isolated on a global expedition. / Wietz, Matthias; Månsson, Maria; Gotfredsen, Charlotte Held; Larsen, Thomas Ostenfeld; Gram, Lone.

    In: Marine Drugs, Vol. 8, No. 12, 2010, p. 2946-2960.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  230. Published

    Application of mechanistic models to fermentation and biocatalysis for next-generation processes. / Gernaey, Krist; Eliasson Lantz, Anna; Tufvesson, Pär; Woodley, John; Sin, Gürkan.

    In: Trends in Biotechnology, Vol. 28, No. 7, 2010, p. 346-354.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  231. Published

    Aspergillus sect. Aeni sect. nov., a new section of the genus for A.karnatakaensis sp. nov. and some allied fungi. / Varga, János; Frisvad, Jens Christian; Samson, Robert A.

    In: IMA Fungus, Vol. 1, No. 2, 2010, p. 197-205.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  232. Published

    A versatile selection system for folding competent proteins using genetic complementation in a eukaryotic host. / Lyngsø, C.; Kjaerulff, S.; Muller, S.; Bratt, T.; Mortensen, Uffe Hasbro; Dal Degan, F.

    In: Protein Science, Vol. 19, No. 3, 2010, p. 579-592.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  233. Published

    Bibliographic review on the potential of microorganisms, microbial products and enzymes to induce respiratory sensitization. / Martel, Cyril; Nielsen, Gunnar D.; Mari, Adriano; Licht, Tine Rask; Poulsen, Lars Kærgaard.

    European Food Safety Authority, 2010.

    Publication: Research - peer-review › Report – Annual report year: 2010

  234. Published

    Bioactive bacteria from Arctic marine environments. / Wietz, Matthias; Månsson, Maria; Bernbom, Nete; Ng, Yin; Gram, Lone.

    2010. Poster session presented at 13th International Symposium on Microbial Ecology, Seattle, WA, United States.

    Publication: Research - peer-review › Poster – Annual report year: 2010

  235. Published

    Biomass Measurements in Filamentous Fermentations: Comparison of Advanced On-Line Sensors. / Petersen, Nanna (Author); Stocks, Stuart M. (Author); Eliasson Lantz, Anna (Author); Gernaey, Krist (Author).

    2010. 2010 AIChE Annual Meeting, Salt Lake City, United States, 07-11-10.

    Publication: Research › Sound/Visual production (digital) – Annual report year: 2010

  236. Published

    Characterization and kinetic analysis of a thermostable GH3 ß-glucosidase from Penicillium brasilianum. / Krogh, Kristian Bertel Rømer; Harris, P.V.; Olsen, C.L.; Johansen, K.S.; Højer-Pedersen, Jesper Juul; Borjesson, J.; Olsson, Lisbeth.

    In: Applied Microbiology and Biotechnology, Vol. 86, No. 1, 2010, p. 143-154.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  237. Published

    Chemical characterization of Phoma pomorum isolated from Danish maize. / Sørensen, Jens Laurids; Aveskamp, M.M.; Thrane, Ulf; Andersen, Birgitte.

    In: International Journal of Food Microbiology, Vol. 136, No. 3, 2010, p. 310-317.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  238. Published

    Combining substrate specificity analysis with support vector classifiers reveals feruloyl esterase as a phylogenetically informative protein group. / Olivares Hernandez, Roberto; Sunner, Hampus; Frisvad, Jens Christian; Olsson, Lisbeth; Nielsen, Jens; Panagiotou, Gianni.

    In: P L o S One, Vol. 5, No. 9, 2010.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  239. Published

    Comparison of advanced online sensors for biomass measurements in filamentous fermentations. / Petersen, Nanna; Stocks, S.M.; Eliasson Lantz, Anna; Gernaey, Krist.

    2010. Abstract from 8th European Symposium on Biochemical Engineering, Bologna, Italy.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2010

  240. Published

    Conditions With High Intracellular Glucose Inhibit Sensing Through Glucose Sensor Snf3 in Saccharomyces cerevisiae. / Karhumaa, Kaisa; Wu, B.Q.; Kielland-Brandt, Morten.

    In: Journal of Cellular Biochemistry, Vol. 110, No. 4, 2010, p. 920-925.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  241. Published

    Cytosporones O, P and Q from an endophytic Cytospora sp.. / Abreu, L.M.; Phipps, Richard Kerry; Pfenning, L.H.; Gotfredsen, Charlotte Held; Takahashi, J.A.; Larsen, Thomas Ostenfeld.

    In: Tetrahedron Letters, Vol. 51, No. 13, 2010, p. 1803-1805.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  242. Published

    Development of a single-use microbioreactor for cultivation of microorganisms. / Schapper, D.; Stocks, S.M.; Szita, Nicolas; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Chemical Engineering Journal, Vol. 160, No. 3, 2010, p. 891-898.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  243. Published

    Differential proteomic analysis highlights metabolic strategies associated with balhimycin production in Amycolatopsis balhimycina chemostat cultivations. / Gallo, Giuseppe; Alduina, Rosa; Renzone, Giovanni; Thykær, Jette; Bianco, Linda; Eliasson Lantz, Anna; Scaloni, Andrea; Puglia, Anna Maria.

    In: Microbial Cell Factories, Vol. 9, 2010, p. 95.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  244. Published

    Differential proteomic analysis reveals novel links between primary metabolism and antibiotic production in Amycolatopsis balhimycina. / Gallo, G.; Renzone, G.; Alduina, R.; Stegmann, E.; Weber, T.; Lantz, A.E.; Thykær, Jette; Sangiorgi, F.; Scaloni, A.; Puglia, A.M.

    In: Proteomics, Vol. 10, No. 7, 2010, p. 1336-1358.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  245. Published

    Display of wasp venom allergens on the cell surface of Saccharomyces cerevisiae. / Borodina, Irina; Jensen, B. M.; Søndergaard, Ib; Poulsen, Lars Kærgaard.

    In: Microbial Cell Factories, Vol. 9, No. 74, 2010.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  246. Published

    Dynamics in the microbiology of maize silage during whole-season storage. / Storm, Ida Marie Lindhardt Drejer; Kristensen, N.B.; Raun, B.M.L.; Smedsgaard, Jørn; Thrane, Ulf.

    In: Journal of Applied Microbiology, Vol. 109, No. 3, 2010, p. 1017-1026.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  247. Published

    Early adaptive developments of Pseudomonas aeruginosa after the transition from life in the environment to persistent colonization in the airways of human cystic fibrosis hosts. / Rau, Martin Holm; Hansen, Susse Kirkelund; Johansen, H. K.; Thomsen, L. E.; Workman, Christopher; Nielsen, Kristian Fog; Jelsbak, Lars; Høiby, N.; Yang, Lei; Molin, Søren.

    In: Environmental Microbiology, Vol. 12, No. 6, 2010, p. 1643-1658.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  248. Published

    Explorative Solid-Phase Extraction (E-SPE) for Accelerated Microbial Natural Product Discovery, Dereplication, and Purification. / Månsson, Maria; Phipps, Richard Kerry; Gram, Lone; Munro, M.H.G.; Larsen, Thomas Ostenfeld; Nielsen, Kristian Fog.

    In: Journal of Natural Products, Vol. 73, No. 6, 2010, p. 1126-1132.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  249. Published

    Food and indoor fungi. / Samson, Robert A.; Houbraken, Jos; Thrane, Ulf; Frisvad, Jens Christian; Andersen, Birgitte.

    Utrecht, The Netherlands : CBS-KNAW Fungal Biodiversity Centre, 2010. 390 p. (CBS Laboratory Manual Series; No. 2).

    Publication: Research - peer-review › Book – Annual report year: 2010

  250. Published

    Functional systems biology of Aspergillus. / Rank, Christian; Larsen, Thomas Ostenfeld; Frisvad, Jens Christian.

    In: Aspergillus: Molecular biology and Genomics. ed. / M. Machida; K. Gomi. 1. ed. Wymondham, Norfolk, UK : Caister Academic Press, 2010. p. 173-198.

    Publication: Research - peer-review › Book chapter – Annual report year: 2010

  251. Published

    Fungal polyketide azaphilone pigments as future natural food colorants?. / Mapari, Sameer Shamsuddin; Thrane, Ulf; Meyer, Anne S.

    In: Trends in Biotechnology, Vol. 28, No. 6, 2010, p. 300-307.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  252. Published

    Fungi and their mycotoxins in maize and maize silage. / Storm, Ida Marie Lindhardt Drejer; Sørensen, Jens Laurids; Rasmussen, Rie Romme; Thrane, Ulf.

    2010. Abstract from 32nd Mycotoxin Workshop, Kgs. Lyngby, Denmark.

    Publication: Research › Conference abstract for conference – Annual report year: 2010

  253. Published

    Fungi and their mycotoxins in maize and maize silage. / Storm, Ida Marie Lindhardt Drejer; Sørensen, J. L.; Rasmussen, Rie Romme; Thrane, Ulf.

    2010. Poster session presented at 32nd Mycotoxin Workshop, Kgs. Lyngby, Denmark.

    Publication: Research › Poster – Annual report year: 2010

  254. Published

    Fusarium spp. associated with rice Bakanae: ecology, genetic diversity, pathogenicity and toxigenicity. / Wulff, E.G.; Sørensen, Jens Laurids; Lubeck, M.; Nielsen, Kristian Fog; Thrane, Ulf; Torp, J.

    In: Environmental Microbiology, Vol. 12, No. 3, 2010, p. 649-657.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  255. Published

    GRISEOFULVIN ANALOGUES FOR THE TREATMENT OF CANCER BY INHIBITION OF CENTROSOMAL CLUSTERING. / Worm, Kasper (Inventor); Rønnest, Mads Holger (Inventor); Rebacz, Blanka (Inventor); Larsen, Thomas Ostenfeld (Inventor); Krämer, Alwin (Inventor); Clausen, Mads Hartvig (Inventor).

    Patent No.: WO10072770. Jul 01, 2010.

    Publication: Research › Patent – Annual report year: 2010

  256. Published

    Hydrophobins from Aspergillus species cannot be clearly divided into two classes. / Jensen, Britt Guillaume; Andersen, Mikael Rørdam; Pedersen, Mona Højgaard; Frisvad, Jens Christian; Søndergaard, Ib.

    In: B M C Research Notes, Vol. 3, 2010, p. 344.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  257. Published

    Implementation of communication-mediating domains for non-ribosomal peptide production in Saccharomyces cerevisiae. / Siewers, Verena; San-Bento, Rita; Nielsen, Jens.

    In: Biotechnology and Bioengineering (Print), Vol. 106, No. 5, 2010, p. 841-844.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  258. Published

    Improved vanillin production in baker's yeast through in silico design. / Brochado, Ana Rita; Matos, Cláudia; Møller, Birger L.; Hansen, Jørgen; Mortensen, Uffe H.; Patil, Kiran Raosaheb.

    In: Microbial Cell Factories, Vol. 9, 2010, p. 84.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  259. Published

    Improved xylose and arabinose utilization by an industrial recombinant Saccharomyces cerevisiae strain using evolutionary engineering. / Sanchez, R.G.; Karhumaa, Kaisa; Fonseca, C.; Nogue, V.S.; Almeida, J.R.M.; Larsson, C.U.; Bengtsson, O.; Bettiga, M.; Hahn-Hagerdal, B.; Gorwa-Grauslund, M.F.

    In: Biotechnology for Biofuels, Vol. 3, No. 13, 2010.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  260. Published

    Inactivation of Vibrio anguillarum by attached and planktonic Roseobacter cells. / D'Alvise, Paul; Melchiorsen, Jette; Porsby, Cisse Hedegaard; Nielsen, Kristian Fog; Gram, Lone.

    In: Applied and Environmental Microbiology, Vol. 76, No. 7, 2010, p. 2366-2370.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  261. Published

    Increased glycopeptide production after overexpression of shikimate pathway genes being part of the balhimycin biosynthetic gene cluster. / Thykær, Jette; Nielsen, Jens; Wohlleben, W.; Weber, T.; Gutknecht, M.; Eliasson Lantz, Anna; Stegmann, E.

    In: Metabolic Engineering, Vol. 12, No. 5, 2010, p. 455-461.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  262. Published

    In Situ Near Infrared Spectroscopy for Analyte-Specific Monitoring of Glucose and Ammonium in Streptomyces coelicolor Fermentations. / Petersen, Nanna; Ödman, Peter; Cervera Padrell, Albert Emili; Stocks, S.; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Biotechnology Progress, Vol. 26, No. 1, 2010, p. 263-271.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  263. Published

    Isolation and NMR Characterization of Fumonisin B-2 and a New Fumonisin B-6 from Aspergillus niger. / Månsson, Maria; Klejnstrup, Marie Louise; Phipps, Richard Kerry; Nielsen, Kristian Fog; Frisvad, Jens Christian; Gotfredsen, Charlotte Held; Larsen, Thomas Ostenfeld.

    In: Journal of Agricultural and Food Chemistry, Vol. 58, No. 2, 2010, p. 949-953.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  264. Published

    Metabolomics for the discovery of novel compounds. / Frisvad, Jens Christian.

    In: Manual of Industrial Microbiology and Biotechnology. ed. / R.H. Baltz; A.L. Demain; J.E. Davies. 3. ed. Washington DC : ASM Press, 2010. p. 73-77.

    Publication: Research - peer-review › Book chapter – Annual report year: 2010

  265. Published

    Method for Screening Compounds That Influence Virulence Gene Expression in Staphylococcus aureus. / Nielsen, A.; Nielsen, Kristian Fog; Frees, D.; Larsen, Thomas Ostenfeld; Ingmer, H.

    In: Antimicrobial Agents and Chemotherapy, Vol. 54, No. 1, 2010, p. 509-512.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  266. Published

    Methylenetetrahydrofolate Reductase Activity Is Involved in the Plasma Membrane Redox System Required for Pigment Biosynthesis in Filamentous Fungi. / Frandsen, Rasmus John Normand; Albertsen, K.S.; Stougaard, P.; Sørensen, J.L.; Nielsen, Kristian Fog; Olsson, S.; Giese, H.

    In: Eukaryotic Cell (Online Edition), Vol. 9, No. 8, 2010, p. 1225-1235.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  267. Published

    Microbioreactors for bioprocess development - practical aspects and limitations. / Schäpper, Daniel; Zainal Alam, Muhd Nazrul Hisham; Bolic, Andrijana; Eliasson Lantz, Anna; Gernaey, Krist.

    2010. Abstract from International Conference on Implementation of Microreactor Technology into Biotechnology (IMTB 2010), Ljubljana, Slovenia, September 29-30, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2010

  268. Published

    Modulation of transcription factors : A metabolic engineering strategy for improving Aspergillus niger as a production host. / Poulsen, Lars; Bruno, K. S.; Andersen, Mikael Rørdam; Eliasson Lantz, Anna; Baker, S. E.; Thykær, Jette.

    2010. Poster session presented at 5th Danish Conference on Biotechnology and Molecular Biology, Vejle, Denmark.

    Publication: Research › Poster – Annual report year: 2010

  269. Published

    Modulation of transcription factors : A metabolic engineering strategy for improving Aspergillus niger as a production host. / Poulsen, Lars; Bruno, K.S.; Andersen, Mikael Rørdam; Eliasson Lantz, Anna; Baker, S. E.; Thykær, Jette.

    2010. Abstract from 5th Danish Conference on Biotechnology and Molecular Biology, Vejle, Denmark.

    Publication: Research › Conference abstract for conference – Annual report year: 2010

  270. Published

    Multi-mycotoxin analysis of maize silage by LC-MS/MS. / Rasmussen, Rie Romme; Storm, Ida Marie Lindhardt Drejer; Rasmussen, Peter Have; Smedsgaard, Jørn; Nielsen, Kristian Fog.

    In: Analytical and Bioanalytical Chemistry, Vol. 397, No. 2, 2010, p. 765-776.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  271. Published

    On-line monitoring of fermentation processes in lignocellulose-to-bioalcohol production. / Eliasson Lantz, Anna; Gernaey, Krist; Franzén, C.J.; Olsson, Lisbeth.

    In: Bioalcohol production. Biochemical conversion of lignocellulosic biomass. ed. / K. Waldron. Woodhead Publishing Ltd., Oxford, 2010. p. 315-339.

    Publication: Research - peer-review › Book chapter – Annual report year: 2010

  272. Published

    OptFlux: an open-source software platform for in silico metabolic engineering. / Rocha, I.; Maia, P.; Evangelista, P.; Vilaca, P.; Soares, S.; Pinto, J.P.; Nielsen, J.; Patil, Kiran Raosaheb; Ferreira, E.C.; Rocha, M.

    In: B M C Systems Biology, Vol. 4, No. 45, 2010.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  273. Published

    Perspectives on the use of global uncertainty and sensitivity analysis methods in a PAT context. / Sin, Gürkan (Author); Eliasson Lantz, Anna (Author); Gernaey, Krist (Author).

    2010. 24th International Foundation Process Analytical Chemistry (IFPAC®), Baltimore, Maryland, United States, 31-01-10.

    Publication: Research › Sound/Visual production (digital) – Annual report year: 2010

  274. Published

    Polyphasic taxonomy of Aspergillus section Sparsi. / Varga, János; Frisvad, Jens Christian; Samson, Robert A.

    In: IMA Fungus, Vol. 1, No. 2, 2010, p. 187-195.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  275. Published

    Production of Fumonisin B-2 and B-4 by Aspergillus niger on Grapes and Raisins. / Mogensen, Jesper Mølgaard; Frisvad, Jens Christian; Thrane, Ulf; Nielsen, Kristian Fog.

    In: Journal of Agricultural and Food Chemistry, Vol. 58, No. 2, 2010, p. 954-958.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  276. Published

    Qualified Presumption of Safety (QPS) is a generic risk assessment approach applied by the European Food Safety Authority (EFSA). / Leuschner, R. G. K.; Robinson, T. P.; Hugas, M.; Cocconcelli, P. S.; Richard-Forget, F.; Klein, G.; Licht, Tine Rask; Nguyen-The, C.; Querol, A.; Richardson, M.; Suarez, J.E.; Thrane, Ulf; Vlak, J. M.; von Wright, A.

    In: Trends in Food Science & Technology, Vol. 21, No. 9, 2010, p. 425-435.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  277. Published

    Quorum Sensing and Virulence of Pseudomonas aeruginosa during Lung Infection of Cystic Fibrosis Patients. / Bjarnsholt, T.; Jensen, P.O.; Jakobsen, T.H.; Phipps, Richard Kerry; Nielsen, A.K.; Rybtke, M.T.; Tolker-Nielsen, T.; Givskov, M.; Hoiby, N.; Ciofu, O.

    In: P L o S One, Vol. 5, No. 4, 2010.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  278. Published

    Reducing the variability of antibiotic production in Streptomyces by cultivation in 24-square deepwell plates. / Siebenberg, S.; Bapat, Prashant Madhusudhan; Eliasson Lantz, Anna; Gust, B.; Heide, L.

    In: Journal of Bioscience and Bioengineering, Vol. 109, No. 3, 2010, p. 230-234.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  279. Published

    Sammenligning af avancerede online sensorer til måling af biomassekoncentrationen i filamentøse fermenteringer. / Petersen, Nanna; Stocks, Stuart; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Proceedings of Dansk Kemiingeniørkonference 2010. 2010. p. 180-181.

    Publication: Research › Article in proceedings – Annual report year: 2010

  280. Published

    Sammenligning af avancerede online sensorer til måling af biomassekoncentrationen i filamentøse fermenteringer. / Petersen, Nanna; Stocks, Stuart; Eliasson Lantz, Anna; Gernaey, Krist.

    2010. Poster session presented at 3. Dansk KemiingeniørKonference, Kgs. Lyngby, Denmark.

    Publication: Research › Poster – Annual report year: 2010

  281. Published

    Sensor combination and chemometric variable selection for online monitoring of Streptomyces coelicolor fed-batch cultivations. / Ödman, Peter; Johansen, C.L.; Olsson, L.; Gernaey, Krist; Eliasson Lantz, Anna.

    In: Applied Microbiology and Biotechnology, Vol. 86, No. 6, 2010, p. 1745-1759.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  282. Published

    Sex in Penicillium series Roqueforti. / Houbraken, Jos; Frisvad, Jens Christian; Samson, Robert A.

    In: IMA Fungus, Vol. 1, No. 2, 2010, p. 171-180.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  283. Published

    Simultaneous determination of ochratoxin A, mycophenolic acid and fumonisin B-2 in meat products. / Sørensen, Louise Marie; Mogensen, Jesper; Nielsen, Kristian Fog.

    In: Analytical and Bioanalytical Chemistry, Vol. 398, No. 3, 2010, p. 1535-1542.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  284. Published

    Species and ecological diversity within the Cladosporium cladosporioides complex (Davidiellaceae, Capnodiales). / Bensch, K.; Groenewald, J.Z.; Dijksterhuis, J.; Starink-Willemse, M.; Andersen, Birgitte; Summerell, B.A.; Shin, H.-D.; Dugan, F.M.; Schroers, H.-J.; Braun, U.; Crous, P.W.

    In: Studies in Mycology, Vol. 67, No. 1, 2010, p. 1.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  285. Published

    Structurally Optimized Microbioreactors: A Design Example for Immobilized Yeast Cultivations. / Lencastre Fernandes, Rita (Author); Schäpper, Daniel (Author); Okkels, Fridolin (Author); Eliasson Lantz, Anna (Author); Bruus, Henrik (Author); Gernaey, Krist (Author).

    2010. 2010 AIChE Annual Meeting, Salt Lake City, United States, 07-11-10.

    Publication: Research › Sound/Visual production (digital) – Annual report year: 2010

  286. Published

    Structurally optimized microbioreactors for immobilized yeast cultivations. / Lencastre Fernandes, Rita; Schäpper, Daniel; Okkels, Fridolin; Eliasson Lantz, Anna; Bruus, Henrik; Gernaey, Krist.

    In: Proceedings of Dansk Kemiingeniørkonference 2010. 2010. p. 194-195.

    Publication: Research › Article in proceedings – Annual report year: 2010

  287. Published

    Structurally optimized microbioreactors for immobilized yeast cultivations. / Lencastre Fernandes, Rita; Schäpper, Daniel; Okkels, Fridolin; Eliasson Lantz, Anna; Bruus, Henrik; Gernaey, Krist.

    2010. Poster session presented at 3. Dansk KemiingeniørKonference, Kgs. Lyngby, Denmark.

    Publication: Research › Poster – Annual report year: 2010

  288. Published

    Structurally optimized microbioreactors for immobilized yeast cultivations. / Lencastre Fernandes, Rita; Schäpper, Daniel; Okkels, Fridolin; Eliasson Lantz, Anna; Bruus, Henrik; Gernaey, Krist.

    2010. Abstract from 8th European Symposium on Biochemical Engineering, Bologna, Italy.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2010

  289. Published

    Substrate uptake, phosphorus repression, and effect of seed culture on glycopeptide antibiotic production : Process model development and experimental validation. / Maiti, Soumen K.; Singh, Kamaleshwar P.; Eliasson Lantz, Anna; Bhushan, Mani; Wangikar, Pramod P.

    In: Biotechnology and Bioengineering (Print), Vol. 105, No. 1, 2010, p. 109-120.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  290. Published

    Surface modification of chromatography adsorbents by low temperature low pressure plasma. / Arpanaei, Ayyoob; Winther-Jensen, Bjørn; Theodosiou, E.; Kingshott, Peter; Hobley, Timothy John; Thomas, O.R.T.

    In: Journal of Chromatography A, Vol. 1217, No. 44, 2010, p. 6905-6916.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  291. Published

    Svampe og mykotoksiner i majsensilage : Ensilering af majs ogf græs. / Thrane, Ulf; Storm, Ida Marie Lindhardt Drejer; Andersen, Birgitte; Rasmussen, Rie Romme; Sørensen, J.L.

    In: Intern rapport Husdyrbrug, No. 21, 2010.

    Publication: Research › Journal article – Annual report year: 2010

  292. Published

    Svampe og mykotoksiner i majsensilage. / Thrane, Ulf; Storm, Ida Marie Lindhardt Drejer; Andersen, Birgitte; Rasmussen, Rie Romme; Sørensen, J.L.

    In: Bovilogisk, No. 5, 2010, p. 46-48.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  293. Published

    Taxonomy of Penicillium citrinum and related species. / Houbraken, J.A.M.P.; Frisvad, Jens Christian; Samson, A.F.

    In: Fungal Diversity, Vol. 44, No. 1, 2010, p. 117-133.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  294. Published

    The rad52-Y66A allele alters the choice of donor template during spontaneous chromosomal recombination. / de Mayolo, A.A.; Sunjevaric, I.; Reid, R.; Mortensen, Uffe Hasbro; Rothstein, R.; Lisby, M.

    In: D N A Repair, Vol. 9, No. 1, 2010, p. 23-32.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  295. Published

    The T Cell Response to Major Grass Allergens Is Regulated and Includes IL-10 Production in Atopic but Not in Non-Atopic Subjects. / Domdey, A.; Liu, A.; Millner, A.; Lund, K.; Jacobi, H.; Malling, H.J.; Søndergaard, Ib; Wurtzen, P.A.

    In: International Archives of Allergy and Immunology, Vol. 152, No. 3, 2010, p. 243-254.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  296. Published

    Widespread Occurrence of the Mycotoxin Fumonisin B-2 in Wine. / Mogensen, Jesper Mølgaard; Larsen, Thomas Ostenfeld; Nielsen, Kristian Fog.

    In: Journal of Agricultural and Food Chemistry, Vol. 58, No. 8, 2010, p. 4853-4857.

    Publication: Research - peer-review › Journal article – Annual report year: 2010

  297. 2009
  298. Published

    Filamentous fungi on meat products, their ability to produce mycotoxins and a proteome approach to study mycotoxin production. / Sørensen, Louise Marie; Frisvad, Jens Christian (Supervisor); Nielsen, Per Væggemose (Supervisor); Lametsch, Rene (Supervisor); Koch, Anette Granly (Supervisor); Jacobsen, Tomas (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2009. 105 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2009

  299. Published

    Post-harvest Fungal Spoilage of Maize Silage : Species, growth conditions and mycotoxin detection. / Storm, Ida Marie Lindhardt Drejer; Thrane, Ulf (Supervisor); Smedsgaard, Jørn (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2009. 148 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2009

  300. Published

    Stability of heterologous protein production by Saccharomyces cerevisiae in continuous cultures. / Krogh, Astrid Mørkeberg; Eliasson Lantz, Anna (Supervisor); Henriksen, Claus Maxel (Supervisor); Møller, Kasper (Supervisor); Christensen, Lars Højlund (Supervisor); Olsson, Lisbeth (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2009. 152 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2009

  301. Published

    Scalable manipulation of proteins using magnetic adsorbents. / Ottow, Kim Ekelund; Hobley, Timothy John (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2009. 199 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2009

  302. Published

    Structural and functional boundaries of human polyclonal antibody responses against tetanus toxoid. / Poulsen, Tine Rugh; Søndergaard, Ib (Supervisor); Andersen, Peter Sejer (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2009. 143 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2009

  303. Published

    Preharvest fungi and their mycotoxins in Danish maize. / Sørensen, Jens Laurids; Thrane, Ulf (Supervisor); Andersen, Birgitte (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2009. 200 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2009

  304. Published

    The effect of high gravity on the brewer´s yeast metabolism - physiological studies and "omics" - analyses. / Piddocke, Maya Petrova; Olsson, Lisbeth (Supervisor); Heldt-Hansen, Hans P. (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2009. 219 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2009

  305. Published

    Chemotaxonomic Exploration of Fungal Biodiversity for Polyketide Natural Food Colorants…. / Mapari, Sameer Shamsuddin; Meyer, Anne S. (Supervisor); Thrane, Ulf (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2009.

    Publication: Research › Ph.d. thesis – Annual report year: 2009

  306. Published

    Exploring the Role of Ubiquitylation in the Mammalian DNA Damage Response. / Kildegaard, Helene Faustrup; Mortensen, Uffe Hasbro (Supervisor); Lukas, Jiri (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2009. 105 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2009

  307. Published

    Optimization of an industrial L-lysine producing Corynebacterium glutamicum strain. / Kjeldsen, Kjeld Raunkjær; Nielsen, Jens (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2009. 187 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2009

  308. Published

    Understanding DNA repair in Aspergillus nidulans - paving the way for efficient gene targeting. / Nielsen, Jakob Blæsbjerg; Nielsen, Michael Lynge (Supervisor); Mortensen, Uffe Hasbro (Supervisor).

    Kgs. Lyngby, Denmark : Technical University of Denmark (DTU), 2009.

    Publication: Research › Ph.d. thesis – Annual report year: 2009

  309. Published

    A case-base study of residential IEQ related risk factors and parental reports of asthma and allergy among 500 Danish children – IECH. / Toftum, Jørn; Clausen, Geo; Callesen, Michael; Bekö, Gabriel; Weschler, Charles J.; Langer, Sarka; Andersen, Birgitte; Høst, Arne.

    In: Proceedings of Healthy Buildings. 2009. p. 617.

    Publication: Research - peer-review › Article in proceedings – Annual report year: 2009

  310. Published

    Analyse af NIR data fra Streptomyces coelicolor fermenteringer. / Petersen, Nanna; Gernaey, Krist; Cervera Padrell, Albert Emili; Eliasson Lantz, Anna; Ödman, Peter; Stocks, Stuart.

    2009. Abstract from Den første danske kemometri-konference, .

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2009

  311. Published

    Analysis of Fusarium avenaceum Metabolites Produced during Wet Apple Core Rot. / Sørensen, Jens Laurids; Phipps, Richard Kerry; Nielsen, Kristian Fog; Schroers, Hans-Josef; Frank, Jana; Thrane, Ulf.

    In: Journal of Agricultural and Food Chemistry, Vol. 57, No. 4, 2009, p. 1632-1639.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  312. Published

    A polyphasic approach to the taxonomy of the Alternaria infectoria species-group. / Andersen, Birgitte; Sørensen, Jens Laurids; Nielsen, Kristian Fog; Gerrits van den Ende, Bert; de Hoog, Sybren.

    In: Fungal Genetics and Biology, Vol. 46, No. 9, 2009, p. 642-656.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  313. Published

    Application of microbioreactors in fermentation process development: a review. / Schäpper, Daniel; Zainal Alam, Muhd Nazrul Hisham; Szita, Nicolas; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Analytical and Bioanalytical Chemistry, Vol. 395, No. 3, 2009, p. 679-695.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  314. Published

    Application of near-infrared spectroscopy for monitoring and control of cell culture and fermentation. / Cervera Padrell, Albert Emili; Petersen, Nanna; Eliasson Lantz, Anna; Larsen, A.; Gernaey, Krist.

    In: Biotechnology Progress, Vol. 25, No. 6, 2009, p. 1561-1581.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  315. Published

    Applying spectroscopic methods and chemometrics to get a snap-shot of physiology in fermentation processes. / Eliasson Lantz, Anna; Ödman, Peter; Petersen, Nanna; Olsson, Lisbeth; Gernaey, Krist.

    2009. Poster session presented at Recent Advances in Fermentation Technology (RAFT VIII) : November 8-11, 2009, San Diego, California, .

    Publication: Research - peer-review › Poster – Annual report year: 2009

  316. Published

    A reappraisal of fungi producing aflatoxins. / Varga, János; Frisvad, Jens Christian; Samson, Robert A.

    In: World Mycotoxin Journal, Vol. 2, No. 3, 2009, p. 263-277.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  317. Published

    Aspergillus acidus from Puerh tea and black tea does not produce ochratoxin A and fumonisin B-2. / Mogensen, Jesper Mølgaard; Varga, J.; Thrane, Ulf; Frisvad, Jens Christian.

    In: International Journal of Food Microbiology, Vol. 132, No. 2-3, 2009, p. 141-144.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  318. Published

    Aspergillus alabamensis, a New Clinically Relevant Species in the Section Terrei. / Balajee, S. A.; Baddley, J. W.; Peterson, S. W.; Nickle, D.; Varga, J.; Boey, A.; Lass-Florl, C.; Frisvad, Jens Christian; Samson, R. A.

    In: Eukaryotic Cell (Online Edition), Vol. 8, No. 5, 2009, p. 713-722.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  319. Published

    Aspergillus niger and fumonisins. / Nielsen, Kristian Fog (Invited author); Mogensen, Jesper Mølgaard (Invited author); Larsen, Thomas Ostenfeld (Invited author); Frisvad, Jens Christian (Invited author).

    2009. Abstract from Nordforsk mould and mycotoxin seminar, Uppsala, Sweden, .

    Publication: Research › Conference abstract for conference – Annual report year: 2009

  320. Published

    Biodiversity and accurate identification of mycotoxin producing fungi. / Frisvad, Jens Christian (Invited author).

    In: ISM2009: Worldside Mycotoxin Recuction in Food and Feed Chains. 2009.

    Publication: Research › Conference abstract in proceedings – Annual report year: 2009

  321. Published

    Bridging the gap between Transcriptome and Metabolome by using Genome-scale Metabolic Models. / Zelezniak, Aleksej; Patil, Kiran Raosaheb.

    2009. Poster session presented at SYSTEMS BIOLOGY AS A DRIVER FOR INDUSTRIAL BIOTECHNOLOGY, .

    Publication: Research › Poster – Annual report year: 2009

  322. Published

    Cellulolytic enzyme production and response to pH and temperature by Trichoderma reesei. / Lehmann, Linda Olkjær; Olsson, Lisbeth; Stocks, Stuart M.; Jørgensen, Henrik S.; Hobley, Timothy John.

    2009. Poster session presented at 31st Symposium on Biotechnology for Fuels and Chemicals, San Francisco, CA, United States.

    Publication: Research › Poster – Annual report year: 2009

  323. Published

    Centrosomal Clustering - a Novel Therapeutic Target for Multiple Myeloma. / Raab, M.S.; Breitkreutz, I.; Rebacz, Blanka; Larsen, Thomas Ostenfeld; Wagner, L.; Hayden, P.; Ho, A.D.; Clausen, M.H.; Goldschmidt, H.; Anderson, K.C.; Kreamer, A.

    In: Blood, Vol. 114, No. 22, 2009, p. 126-126.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2009

  324. Published

    Centrosomal Clustering: A Novel Therapeutic Target for Multiple Myeloma. / Raab, M. S.; Breitkreutz, I.; Rebacz, Blanka; Hayden, P. J.; Larsen, Thomas Ostenfeld; Clausen, M. H.; Fruehauf, J. H.; Goldschmidt, H.; Anderson, K. C.; Kraemer, A.

    In: Clinical Lymphoma & Myeloma, Vol. 9, 2009, p. S153-S153.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2009

  325. Published

    Characterization of chromosomal integration sites for heterologous gene expression in Saccharomyces cerevisiae. / Bai, Dongmei; Siewers, Verena; Huang, Le; Nielsen, Jens.

    In: Yeast, Vol. 26, No. 10, 2009, p. 545-551.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  326. Published

    Chemical challenges from the Roseobacter strains. / Nielsen, Kristian Fog (Invited author); Månsson, Maria (Invited author).

    2009. Abstract from The Danish Society of Analytical Chemistry : Two years with Galathea 3 in Denmark, .

    Publication: Research › Conference abstract for conference – Annual report year: 2009

  327. Published

    Continuous culture microbioreactors. / Schäpper, Daniel (Author); Eliasson Lantz, Anna (Author); Stocks, S. (Author); Szita, Nicolas (Author); Gernaey, Krist (Author).

    2009. Society of General Microbiology Autumn 2009 Meeting, Heriot-Watt University, Edinburgh, Scotland, September 7-10, 01-01-09.

    Publication: Research › Sound/Visual production (digital) – Annual report year: 2009

  328. Published

    Controlled indole-3-acetaldoxime production through ethanol-induced expression of CYP79B2. / Mikkelsen, M.D.; Fuller, V.L.; Hansen, Bjarne Gram; Nafisi, M.; Olsen, C.E.; Nielsen, Henrik Bjørn; Halkier, B.A.

    In: Planta, Vol. 229, No. 6, 2009, p. 1209-1217.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  329. Published

    Current status of systems biology in Aspergilli. / Andersen, Mikael Rørdam; Nielsen, Jens.

    In: Fungal Genetics and Biology, Vol. 46, No. 1, 2009, p. 180-190.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  330. Published

    Development of continuous culture microbioreactors. / Schäpper, Daniel; Fernandes, R L; Gernaey, Krist; Eliasson Lantz, Anna; Stocks, Stuart; Szita, Nicolas.

    2009. Abstract from 10th International Conference on Microreaction Technology, New Orleans, LA, United States.

    Publication: Research - peer-review › Conference abstract for conference – Annual report year: 2009

  331. Published

    Development of continuous culture microbioreactors. / Schäpper, Daniel (Author); Fernandes, Rita L (Author); Gernaey, Krist (Author); Eliasson Lantz, Anna (Author); Stocks, Stuart (Author); Szita, Nicolas (Author).

    2009. 10th International Conference on Microreaction Technology, New Orleans, LA, United States, 07-04-08.

    Publication: Research › Sound/Visual production (digital) – Annual report year: 2009

  332. Published

    Development of high-throughput methods for heterologous expression in fungi. / Hansen, Bjarne Gram; Nielsen, Jakob Blæsbjerg; Nielsen, Michael Lynge; Patil, Kiran Raosaheb; Mortensen, Uffe Hasbro.

    2009. Poster session presented at 6th International Aspergillus Meeting, Asilomar, California, USA, .

    Publication: Research › Poster – Annual report year: 2009

  333. Published

    Directed Evolution towards Increased Isoprenoid Production in Saccharomyces cerevisiae. / Carlsen, Simon; Nielsen, Michael Lynge; Kielland-Brandt, Morten; Eliasson Lantz, Anna.

    2009. Poster session presented at Systems Biology as a driver for Industrial Biotechnology, Istanbul, Turkey, .

    Publication: Research › Poster – Annual report year: 2009

  334. Published

    Display of wasp venom allergens on the cell surface of yeast. / Borodina, Irina; Jensen, Bettina; Søndergaard, Ib; Larsen, Jørgen Nedergaard; Poulsen, Lars K.

    2009. Poster session presented at Allergy School on Hymenoptera venom allergy, Ancona, Italy, .

    Publication: Research › Poster – Annual report year: 2009

  335. Published

    Disposable continuous culture microbioreactor with yeast for screening and process development applications. / Eliasson Lantz, Anna (Author); Schäpper, Daniel (Author); Stocks, S. (Author); Szita, Nicolas (Author); Gernaey, Krist (Author).

    2009. Recent Advances in Fermentation Technology (RAFT VIII), San Diego, California, November 8-11, 2009, 01-01-09.

    Publication: Research › Sound/Visual production (digital) – Annual report year: 2009

  336. Published

    Disruption of the NADPH-dependent glutamate dehydrogenase affects the morphology of two industrial strains of Penicillium chrysogenum. / Thykær, Jette; Kildegaard, Kanchana Rueksomtawin; Noorman, H.; Nielsen, Jens.

    In: Journal of Biotechnology, Vol. 139, No. 4, 2009, p. 280-282.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  337. Published

    Dissection of polyketide biosynthesis pathway in Aspergillus nidulans. / Nielsen, Michael Lynge; Brogaard, Katrine Husted; Rank, Christian; Nielsen, Jakob Blæsbjerg; Larsen, Thomas Ostenfeld; Frisvad, Jens Christian; Mortensen, Uffe Hasbro.

    2009. Poster session presented at 25th Fungal Genetics Conference, Asilomar, CA, United States.

    Publication: Research › Poster – Annual report year: 2009

  338. Published

    Effect of competition on the production and activity of secondary metabolites in Aspergillus species. / Losada, L.; Ajayi, O.; Frisvad, Jens Christian; Yu, J. J.; Nierman, W. C.

    In: Medical Mycology, Vol. 47, 2009, p. S88-S96.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  339. Published

    Effect of temperature and water activity on the production of fumonisins by Aspergillus niger and different Fusarium species. / Mogensen, Jesper Mølgaard; Nielsen, Kristian Fog; Samson, Robert A.; Frisvad, Jens Christian; Thrane, Ulf.

    In: B M C Microbiology, Vol. 9, 2009, p. 281.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  340. Published

    Engineering the spatial organization of metabolic pathways. / Albertsen, Line; Maury, Jerome; Bach, Lars Stougaard; Nielsen, Jens; Mortensen, Uffe Hasbro.

    2009. Poster session presented at Biochemical Engineering XVI, Burlington, Vermont, USA, .

    Publication: Research › Poster – Annual report year: 2009

  341. Published

    Enhancing sesquiterpene production in Saccharomyces cerevisiae through in silico driven metabolic engineering. / Asadollahi, Mohammadali; Maury, Jerome; Patil, Kiran Raosaheb; schalk, Michel; Clark, Anthony; Nielsen, Jens.

    In: Metabolic Engineering, Vol. 11, No. 6, 2009, p. 328-334.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  342. Published

    E-SPE : Explorative Solid-Phase-Extraction for Accelerated Natural Product Discovery and Purification. / Månsson, Maria; Phipps, Richard Kerry; Gram, Lone; Larsen, Thomas Ostenfeld; Nielsen, Kristian Fog.

    2009. Poster session presented at Nordic Natural Products Conference, Reijkavik, Island, .

    Publication: Research › Poster – Annual report year: 2009

  343. Published

    Essential pathway identification: from in silico analysis to potential antifungal targets in Aspergillus fumigatus. / Thykær, Jette; Andersen, Mikael Rørdam; Baker, S. E.

    In: Medical Mycology, Vol. 47, No. Suppl. 1, 2009, p. S80-S87.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  344. Published

    Establishing Saccharomyces cerevisiae as platform for isoprenoid production. / Carlsen, Simon; Nielsen, Michael Lynge; Kielland-Brandt, Morten; Eliasson Lantz, Anna.

    2009. Poster session presented at Symposium for Biotechnological Research, Lyngby, .

    Publication: Research › Poster – Annual report year: 2009

  345. Published

    Explorative Solid-Phase Extraction for Accelerated Natural Products Discovery and Purification : Abstract of poster presentation. / Johansen, Maria; Nielsen, Kristian Fog; Gram, Lone; Larsen, Thomas Ostenfeld.

    2009. Abstract from 6th European Conference on Marine Natural Products, Porto (PT), 19-23 Jul, .

    Publication: Research › Conference abstract for conference – Annual report year: 2009

  346. Published

    Exploring abiotic stress on asynchronous protein metabolism in single kernels of wheat studied by NMR spectroscopy and chemometrics. / Winning, H.; Viereck, N.; Wollenweber, B.; Larsen, F.H.; Jacobsen, Susanne; Søndergaard, Ib; Engelsen, S.B.

    In: Journal of Experimental Botany, Vol. 60, No. 1, 2009, p. 291-300.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  347. Published

    Extrolites, ecology and evolution: : Functional molecular features are the leaders, genes are followers. / Frisvad, Jens Christian (Invited author).

    In: International Conference on Fungal Evolution and Charles Darwin: From Morphology to Molecules. 2009.

    Publication: Research › Conference abstract in proceedings – Annual report year: 2009

  348. Published

    Fingerprinting using extrolite profiles and physiological data shows sub-specific groupings of Penicillium crustosum strains. / Sonjak, Silva; Frisvad, Jens Christian; Gunde-Cimerman, Nina.

    In: Mycological Research, Vol. 113, 2009, p. 836-841.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  349. Published

    Fumonisin B2 production by Aspergillus niger in Thai coffee beans. / Noonim, P.; Mahakarnchanaku, W.; Nielsen, Kristian Fog; Frisvad, Jens Christian; Samson, R. A.

    In: Food Additives and Contaminants, Vol. 26, No. 1, 2009, p. 94-100.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  350. Published

    Fungal communities on cork. / Basilio, Carmo (Invited author); Houbraken, J. (Invited author); Samson, R. (Invited author); Frisvad, Jens Christian (Invited author); Crespo, M.T. (Invited author); San Romao, M.V. (Invited author).

    2009. Poster session presented at MICROBIOTEC : The Portugese Society of Microbiology and the Portugese Society of Biotechnology, Vilamoura, Algarve, Portugal, .

    Publication: Research › Poster – Annual report year: 2009

  351. Published

    Gene deletion of cytosolic ATP: citrate lyase leads to altered organic acid production in Aspergillus niger. / Meijer, Susan Lisette; Nielsen, Michael Lynge; Olsson, Lisbeth; Nielsen, Jens.

    In: Journal of Industrial Microbiology and Biotechnology, Vol. 36, 2009, p. 1275-1280.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  352. Published

    Genetic relationships among strains of the Aspergillus niger aggregate. / Ferracin, L.M.; Frisvad, Jens Christian; Taniwaki, M.H.; Iamanaka, B.T.; Sartori, D.; Schaoavaloff, M.E.; Fungaro, M.H.P.

    In: Brazilian Archives of Biology and Technology, Vol. 52, 2009, p. 241-248.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  353. Published

    Genome wide analysis of A. niger metabolism during industrial fed-batch fermentations. / Pedersen, Lasse; Hansen, Kim; Nielsen, Kristian Fog; Nielsen, Jens; Thykær, Jette.

    2009. Poster session presented at SBE’s 2nd International Conference on Biomolecular Engineering, Santa Barbara, Californien, .

    Publication: Research › Poster – Annual report year: 2009

  354. Published

    Giftige fumonisiner fra Aspergillus niger. / Mogensen, Jesper Mølgaard; Mogensen, Jesper; Frisvad, Jens Christian; Thrane, Ulf; Larsen, Thomas Ostenfeld; Nielsen, Kristian Fog.

    In: Dansk Kemi, Vol. 90, No. 1, 2009, p. 25-27.

    Publication: Communication › Journal article – Annual report year: 2009

  355. Published

    Global transcriptional response of Saccharomyces cerevisiae to the deletion of SDH3. / Cimini, Donatella; Patil, Kiran Raosaheb; Schiraldi, Chiara; Nielsen, Jens.

    In: BMC Systems Biology, Vol. 3, 2009, p. 17.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  356. Published

    Good Modeling Practice for PAT Applications: Propagation of Input Uncertainty and Sensitivity Analysis. / Sin, Gürkan; Gernaey, Krist; Eliasson Lantz, Anna.

    In: Biotechnology Progress, Vol. 25, No. 4, 2009, p. 1043-1053.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  357. Published

    Heterologous expression of hydrophobins RodA and RodB from Aspergillus fumigatus in host Pichia pastoris. / Pedersen, Mona Højgaard; Borodina, Irina; Frisvad, Jens Christian; Søndergaard, Ib.

    2009. Poster session presented at International Conference on Environmental, Industrial and Applied Microbiology : BioMicroWorld 2009, Lissabon, Portugal, .

    Publication: Research › Poster – Annual report year: 2009

  358. Published

    Heterologous production of non-ribosomal peptide LLD-ACV in Saccharomyces cerevisiae. / Siewers, Verena; Chen, Xiao; Huang, Le; Zhang, Jie; Nielsen, Jens.

    In: Metabolic Engineering, Vol. 11, 2009, p. 391-397.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  359. Published

    Heterologous Production of Polyketides in Fungi. / Mølgaard, Louise; Hansen, Bjarne Gram; Mortensen, Uffe Hasbro; Patil, Kiran Raosaheb.

    2009. Poster session presented at Systems Biology as a driver for Industrial Biotechnology, Istanbul, Turkey, .

    Publication: Research › Poster – Annual report year: 2009

  360. Published

    Identification of potentially safe promising fungal cell factories for the production of polyketide natural food colorants using chemotaxonomic rationale. / Mapari, Sameer Shamsuddin; Meyer, Anne S.; Thrane, Ulf; Frisvad, Jens Christian.

    In: Microbial Cell Factories, Vol. 8, 2009, p. 24.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  361. Published

    Identification, pathogenicity and distribution of Penicillium spp. isolated from garlic in two regions in Argentina. / Valdez, Jorge G.; Makuch, M. A.; Ordovini, A. F.; Frisvad, Jens Christian; Overy, David Patrick; Masuelli, R. W.; Piccolo, R. J.

    In: Plant Pathology, Vol. 58, No. 2, 2009, p. 352-361.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  362. Published

    Impact of overexpressing NADH kinase on glucose and xylose metabolism in recombinant xylose-utilizing Saccharomyces cerevisiae. / Hou, Jin; Vemuri, G. N.; Bao, X. M.; Olsson, Lisbeth.

    In: Applied Microbiology and Biotechnology, Vol. 82, No. 5, 2009, p. 909-919.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  363. Published

    Improving Aspergillus niger as a production host through manipulation of pH responding transcription factors.. / Poulsen, Lars; Bruno, K.S.; Thykær, Jette; Baker, S.E.; Eliasson Lantz, Anna.

    2009. Poster session presented at Recent Advances in Fermentation Technology VIII, San Diego, California, USA, .

    Publication: Research › Poster – Annual report year: 2009

  364. Published

    Improving gene targeting in Aspergillus nidulans for high-throughput experiments. / Nielsen, Jakob Blæsbjerg; Nielsen, Michael Lynge; Hansen, Bjarne Gram; Mortensen, Uffe Hasbro.

    2009. Poster session presented at 25th Fungal Genetics Conference, Asilomar, CA, United States.

    Publication: Research › Poster – Annual report year: 2009

  365. Published

    Inactivation of the rhlA gene in Pseudomonas aeruginosa prevents rhamnolipid production, disabling the protection against polymorphonuclear leukocytes. / van Gennip, Maria; Christensen, Louise Dahl; Alhede, Morten; Phipps, Richard Kerry; Jensen, P. O.; Christophersen, L.; Pamp, Sünje Johanna; Moser, C.; Mikkelsen, Per Jensen; Koh, A.Y.; Tolker-Nielsen, Tim; Pier, G. B.; Hoiby, N.; Givskov, Michael Christian; Bjarnsholt, Thomas.

    In: Acta Pathologica Microbiologica et Immunologica Scandinavica, Vol. 117, No. 7, 2009, p. 537-546.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  366. Published

    In-depth analysis of Aspergillus niger metabolism during industrial fed-batch fermentations. / Pedersen, Lasse; Hansen, Kim; Nielsen, Jens; Eliasson Lantz, Anna; Thykær, Jette.

    2009. Poster session presented at 14th European Congress on Biotechnology, Barcelona, Spain.

    Publication: Research › Poster – Annual report year: 2009

  367. Published

    Indoor Environment and Children’s Health (IECH) – An ongoing epidemiological investigation on the association between indoor environmental factors in homes and kindergartens and children’s health and wellbeing. / Clausen, Geo; Høst, Arne; Toftum, Jørn; Bekö, Gabriel; Weschler, Charles J.; Callesen, Michael; Buhl, Susanne; Ladegaard, Mette Bill; Langer, Sarka; Andersen, Birgitte; Sundell, Jan; Bornehag, Carl-Gustaf; Sigsgaard, Torben.

    In: Proceedings of Healthy Buildings 2009. Syracuse, 2009. p. 603.

    Publication: Research - peer-review › Article in proceedings – Annual report year: 2009

  368. Published

    In silico evolution leads to green chemical factory : Vanillin green cell factory. / Brochado, Ana Rita; Matos, Claudia; Mortensen, Uffe Hasbro; Patil, Kiran Raosaheb.

    2009. Poster session presented at SYSTEMS BIOLOGY AS A DRIVER FOR INDUSTRIAL BIOTECHNOLOGY, Istanbul, Turkey, .

    Publication: Research › Poster – Annual report year: 2009

  369. Published

    In Silico Genome-Scale Reconstruction and Validation of the Corynebacterium glutamicum Metabolic Network. / Kjeldsen, Kjeld Raunkjær; Nielsen, J.

    In: Biotechnology and Bioengineering (Print), Vol. 102, No. 2, 2009, p. 583-597.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  370. Published

    In Situ Magnetic Separation for Extracellular Protein Production. / Kappler, T.; Cerff, Martin; Ottow, Kim Ekelund; Hobley, Timothy John; Posten, C.

    In: Biotechnology and Bioengineering (Print), Vol. 102, No. 2, 2009, p. 535-545.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  371. Published

    Interpretation of electrospray spectra - Getting the molecular mass correct each time - learning from a library of 800 microbial metabolites. / Nielsen, Kristian Fog (Invited author).

    2009. Abstract from Executive Seminars in Analytical Chemistry, Copenhagen, .

    Publication: Research › Conference abstract for conference – Annual report year: 2009

  372. Published

    Intracellular glucose concentration affects glucose sensing by transporter-like sensor Snf3 in yeast : Presented at: FEMS 2009 3rd Congress of European Microbiologists. / Karhumaa, Kaisa; Wu, B.; Kielland-Brandt, Morten.

    2009. Poster session presented at 3rd Congress of European Microbiologists, Goteborg, Sweden.

    Publication: Research › Poster – Annual report year: 2009

  373. Published

    In vitro activities of eight antifungal drugs against 70 clinical and environmental isolates of Alternaria species. / Badali, H.; De Hoog, G. S.; Curfs-Breuker, I.; Andersen, Birgitte; Meis, J. F.

    In: Journal of Antimicrobial Chemotherapy, Vol. 63, No. 6, 2009, p. 1295-1297.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  374. Published

    Lægemiddelproduktion - brugen af modellering og PAT. / Gernaey, Krist; Sin, Gürkan; Eliasson Lantz, Anna; Woodley, John; Gani, Rafiqul; Dam-Johansen, Kim.

    In: Dansk Kemi, Vol. 90, No. 3, 2009, p. 22-24.

    Publication: Communication › Journal article – Annual report year: 2009

  375. Published

    LC-HRMS dereplication of mycotoxins and microbial metabolites based on 800 reference standards : Interpretation of ESI spectra and chromatographic retention. / Nielsen, Kristian Fog (Invited author); Larsen, Thomas Ostenfeld (Invited author); Frisvad, Jens Christian (Invited author).

    In: ISM Conference 2009: Worldwide Mycotoxin Reduction in Food and Feed Chains. 2009.

    Publication: Research › Conference abstract in proceedings – Annual report year: 2009

  376. Published

    Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p. / Moxley, Joel F.; Jewett, Michael Christopher; Antoniewicz, Maciek R.; Villas-Boas, Silas G.; Alper, Hal; Wheeler, Robert T.; Tong, Lily; Hinnebusch, Alan G.; Ideker, Trey; Nielsen, Jens; Stephanopoulos, Gregory.

    In: Proceedings of the National Academy of Science of the United States of America, Vol. 106, No. 16, 2009, p. 6477-6482.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  377. Published

    Marksvampes mykotoksiner i majs - nok ikke skyld i sundhedsproblemer hos kvæg. / Sørensen, Jens Laurids; Storm, Ida Marie Lindhardt Drejer; Andersen, Birgitte; Thrane, Ulf.

    In: Ny Kvægforskning, Vol. 4, 2009.

    Publication: Communication › Journal article – Annual report year: 2009

  378. Published

    Masseeksperiment 2009 : Indeklima i klasselokaler. / Andersen, Birgitte; Clausen, Geo; Larsen, E. M.; Menå, H. R.

    2009.

    Publication: Communication › Report – Annual report year: 2009

  379. Published

    Mechanistic models and advanced model analysis within a PAT framework. / Gernaey, Krist; Woodley, John; Eliasson Lantz, Anna; Sin, Gürkan.

    2009. Poster session presented at 14th European Congress on Biotechnology, Barcelona, Spain.

    Publication: Research - peer-review › Poster – Annual report year: 2009

  380. Published

    Metabolic Engineering of Filamentous Fungi. / Andersen, Mikael Rørdam; Kildegaard, Kanchana Rueksomtawin; Hofmann, Gerald; Nielsen, Jens.

    In: Metabolic Pathway Engineering Handbook. ed. / C. Smolke. Vol. 1 (Chapter 25) 1.ed. Boca Raton, Florida : C R C Press LLC, 2009. p. 1-30.

    Publication: Research - peer-review › Book chapter – Annual report year: 2009

  381. Published

    Metabolomics of Aspergillus fumigatus. / Frisvad, Jens Christian; Rank, Christian; Nielsen, Kristian Fog; Larsen, Thomas Ostenfeld.

    In: Medical Mycology, Vol. 47, No. 1, 2009, p. S53-S71.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  382. Published

    Monitoring and modeling temperature variations inside silage stacks using novel wireless sensor networks. / Green, O.; Nadimi, E.S.; Blanes-Vidal, V.; Jorgensen, R.N.; Storm, Ida Marie Lindhardt Drejer; Sorensen, C.G.

    In: Computers and Electronics in Agriculture, Vol. 69, No. 2, 2009, p. 149-157.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  383. Published

    Monitoring of S. coelicolor fermentations using in-situ NIR. / Petersen, Nanna; Ödman, Peter; Cervera Padrell, Albert Emili; Eliasson Lantz, Anna; Stocks, S.; Gernaey, Krist.

    2009. Poster session presented at 14th European Congress on Biotechnology, Barcelona, Spain.

    Publication: Research - peer-review › Poster – Annual report year: 2009

  384. Published

    Mycotoxins: The important species that produce them. / Frisvad, Jens Christian (Invited author).

    In: Acta Microbiologica et Immunologica Hungarica. Vol. 56 Akadémiai Kiadó, 2009.

    Publication: Research › Conference abstract in proceedings – Annual report year: 2009

  385. Published

    Nutritional Systems Biology: Definitions and Approaches. / Panagiotou, Gianni; Nielsen, Jens.

    In: Annual Review of Nutrition, Vol. 29, 2009, p. 329-339.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  386. Published

    On-line estimation of biomass, glucose and ethanol in Saccharomyces cerevisiae cultivations using in-situ multi-wavelength fluorescence and software sensors. / Ödman, Peter; Lindvald Johansen, C.; Olsson, Lisbeth; Gernaey, Krist; Eliasson Lantz, Anna.

    In: Journal of Biotechnology, Vol. 144, No. 2, 2009, p. 102-112.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  387. Published

    Overexpression of a novel endogenous NADH kinase in Aspergillus nidulans enhances growth. / Panagiotou, Gianni; Grotkjær, Thomas; Hofmann, Gerald; Bapat, Prashant Madhusudhan; Olsson, Lisbeth.

    In: Metabolic Engineering, Vol. 11, No. 1, 2009, p. 31-39.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  388. Published

    Overexpression of isocitrate lyase-glyoxylate bypass influence on metabolism in Aspergillus niger. / Meijer, Susan Lisette; Otero, José Manuel; Olivares Hernandez, Roberto; Andersen, Mikael Rørdam; Olsson, Lisbeth; Nielsen, Jens.

    In: Metabolic Engineering, Vol. 11, No. 2, 2009, p. 107-116.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  389. Published

    Photostability of Natural Orange-Red and Yellow Fungal Pigments in Liquid Food Model Systems. / Mapari, Sameer Shamsuddin; Meyer, Anne S.; Thrane, Ulf.

    In: Journal of Agricultural and Food Chemistry, Vol. 57, No. 14, 2009, p. 6253-6261.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  390. Published

    Physiological characterization of brewer's yeast in high-gravity beer fermentations with glucose or maltose syrups as adjuncts. / Piddocke, Maya Petrova; kreisz, Stefan; Heldt-Hansen, Hans Peter; Nielsen, Kristian Fog; Olsson, Lisbeth.

    In: Applied Microbiology and Biotechnology, Vol. 84, No. 3, 2009, p. 453-464.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  391. Published

    Pigment production in response to deficiency in DNA repair. / Nielsen, Jakob Blæsbjerg; Rank, Christian; Mapari, Sameer Shamsuddin; Nielsen, Michael Lynge; Larsen, Thomas Ostenfeld; Frisvad, Jens Christian; Mortensen, Uffe Hasbro.

    2009. Poster session presented at 25th Fungal Genetics Conference, Asilomar, CA, United States.

    Publication: Research › Poster – Annual report year: 2009

  392. Published

    Polyphasic taxonomy of the heat resistant ascomycete genus Byssochlamys and its Paecilomyces anamorphs. / Samson, R.A.; Houbraken, J.; Varga, J.; Frisvad, Jens Christian.

    In: Persoonia, Vol. 22, 2009, p. 14-27.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  393. Published

    Post-genomic insights into the plant polysaccharide degradation potential of Aspergillus nidulans and comparison to Aspergillus niger and Aspergillus oryzae. / Coutinho, Pedro M.; Andersen, Mikael Rørdam; Kolenova, Katarina; vanKuyk, Patricia A.; Benoit, Isabelle; Gruben, Birgit S.; Trejo-Aguilar, Blanca; Visser, Hans; van Solingen, Piet; Pakula, Tiina; Seiboth, Bernard; Battaglia, Evy; Aguilar-Osorio, Guillermo; de Jong, Jan F.; Ohm, Robin A.; Aguilar, Mariana; Henrissat, Bernard; Nielsen, Jens; Stålbrand, Henrik; de Vries, Ronald P.

    In: Fungal Genetics and Biology, Vol. 46, No. Suppl. 1, 2009, p. S161-S169.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  394. Published

    Potato carrot agar with manganese as an isolation medium for Alternaria, Epicoccum and Phoma. / Sørensen, Jens Laurids; Mogensen, Jesper Mølgaard; Thrane, Ulf; Andersen, Birgitte.

    In: International Journal of Food Microbiology, Vol. 130, No. 1, 2009, p. 22-26.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  395. Published

    PRODUCTION OF MONASCUS-LIKE AZAPHILONE PIGMENT. / Mapari, Sameer Shamsuddin (Inventor); Thrane, Ulf (Inventor); Meyer, Anne S. (Inventor); Frisvad, Jens Christian (Inventor).

    Patent No.: WO2009026923. Mar 05, 2009.

    Publication: Research › Patent – Annual report year: 2009

  396. Published

    Production of wasp venom allergens in Pichia pastoris. / Borodina, Irina (Author); Poulsen, Lars Kærgaard (Author); Larsen, Jørgen Nedergaard (Author); Søndergaard, Ib (Author).

    2009. Pichia, Tucson, Arizona, USA, 01-01-09.

    Publication: Research › Sound/Visual production (digital) – Annual report year: 2009

  397. Published

    Proteome analysis of Aspergillus niger: Lactate added in starch-containing medium can increase production of the mycotoxin fumonisin B2 by modifying acetyl-CoA metabolism. / Sørensen, Louise Marie; Lametsch, Rene; Andersen, Mikael Rørdam; Nielsen, Per Væggemose; Frisvad, Jens Christian.

    In: B M C Microbiology, Vol. 9, No. 255, 2009.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  398. Published

    Pseudomonas aeruginosa recognizes and responds aggressively to the presence of polymorphonuclear leukocytes. / Alhede, Morten; Bjarnsholt, T.; Jensen, P.O.; Phipps, Richard Kerry; Moser, C.; Christophersen, L.; Christensen, L.D.; van Gennip, M.; Parsek, M.; Hoiby, N.; Rasmussen, T.B.; Givskov, M.

    In: Microbiology, Vol. 155, No. Part 11, 2009, p. 3500-3508.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  399. Published

    Rad52. / Mortensen, Uffe Hasbro; Lisby, Michael; Rothstein, Rodney.

    In: Current Biology, Vol. 19, No. 16, 2009, p. R676-R677.

    Publication: Communication › Journal article – Annual report year: 2009

  400. Published

    Recombinant bacterial hemoglobin alters metabolism of Aspergillus niger. / Hofmann, Gerald; Diano, Audrey; Nielsen, Jens.

    In: Metabolic Engineering, Vol. 11, No. 1, 2009, p. 8-12.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  401. Published

    Reconstruction and logical modeling of glucose repression signaling pathways in Saccharomyces cerevisiae. / Christensen, Tobias S.; Soberano de Oliveira, Ana Paula; Nielsen, Jens.

    In: BMC Systems Biology, Vol. 3, 2009, p. 7.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  402. Published

    Reconstruction of the yeast Snf1 kinase regulatory network reveals its role as a global energy regulator. / Usaite, Renata; Jewett, Michael Christopher; Soberano de Oliveira, Ana Paula; Yates III, John R.; Olsson, Lisbeth; Nielsen, Jens.

    In: Molecular Systems Biology, Vol. 5, 2009, p. 319.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  403. Published

    Regulation of secondary metabolism in Streptomyces coelicolor A3(2). / Sohoni, Sujata Vijay; Mijakovic, Ivan; Eliasson Lantz, Anna.

    2009. Poster session presented at Biology of Streptomycetes, Münster, Germany, .

    Publication: Research › Poster – Annual report year: 2009

  404. Published

    Review of secondary metabolites and mycotoxins from the Aspergillus niger group. / Nielsen, Kristian Fog; Mogensen, Jesper Mølgaard; Johansen, Maria; Larsen, Thomas Ostenfeld; Frisvad, Jens Christian.

    In: Analytical and Bioanalytical Chemistry, Vol. 395, No. 5, 2009, p. 1225-1242.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  405. Published

    Role of teh Rad52 Amino-terminal DNA Binding Activity in DNA Strand Capture in Homologous Recombination. / Shi, Idina; Hallwyl, Swee Chuang Lim; Seong, Changhyun; Mortensen, Uffe Hasbro; Rothstein, Rodney; Sung, Patrick.

    In: Journal of Biological Chemistry, Vol. 284, No. 48, 2009, p. 33275-33284.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  406. Published

    Screening for cellulose and hemicellulose degrading enzymes from the fungal genus Ulocladium. / Pedersen, Mads; Hollensted, Morten; Lange, L.; Andersen, Birgitte.

    In: International Biodeterioration and Biodegradation, Vol. 63, No. 4, 2009, p. 484-489.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  407. Published

    Secondary metabolites from Eurotium species, Aspergillus calidoustus and A. insuetus common in Canadian homes with a review of their chemistry and biological activities. / Slack, G. J.; Puniani, E.; Frisvad, Jens Christian; Samson, R. A.; Miller, J. D.

    In: Mycological Research, Vol. 113, No. 4, 2009, p. 480-490.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  408. Published

    Sensitivity analysis of non-linear dynamic models: Prioritizing experimental research. / Sin, Gürkan (Author); Eliasson Lantz, Anna (Author); Gernaey, Krist (Author).

    2009. 10th International Symposium on Process System Engineering, Salvador de Bahia, Brazil, 16-08-09.

    Publication: Research › Sound/Visual production (digital) – Annual report year: 2009

  409. Published

    Sensitivity Analysis of Non-Linear Dynamic Models: Prioritizing Experimental Research. / Sin, Gürkan; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Proceedings of 10th International Symposium in Process Systems Engineering - PSE2009: Computer-Aided Chemical Engineering. ed. / Rita Maria de Brito Alves; Claudio Augusto Oller do Nascimento; Evaristo Chalbaud Biscia Jr. Vol. 27A 2009. p. 267-272.

    Publication: Research - peer-review › Article in proceedings – Annual report year: 2009

  410. Published

    Skimmelsvampe frikendt for sygdom blandt malkekvæg. / Jørgensen, Susan Blom (Editor); Sørensen, Jens Laurids; Storm, Ida Marie Lindhardt Drejer.

    In: FoodDTU Midt i Ugen, 2009.

    Publication: Communication › Journal article – Annual report year: 2009

  411. Published

    Studies of the Production of Fungal Polyketides in Aspergillus nidulans by Using Systems Biology Tools. / Panagiotou, Gianni; Andersen, Mikael Rørdam; Grotkjær, Thomas; Regueira, Torsten Ulrik Bak; Nielsen, Jens; Olsson, Lisbeth.

    In: Applied and Environmental Microbiology, Vol. 75, No. 7, 2009, p. 2212-2220.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  412. Published

    Sugar preferences of transporter-like sensors Snf3 and Rgt2 in Saccharomyces cerevisiae. / Karhumaa, Kaisa; Wu, Boqian; Kielland-Brandt, Morten.

    2009. Poster session presented at International Conference Yeast Genetics Molecular Biology, Manchester, UK, .

    Publication: Research › Poster – Annual report year: 2009

  413. Published

    Svampenaturstoffer som grundskelet for nye typer af lægemidler mod kræft. / Rønnest, Mads Holger; Worm-Leonard, K.; Clausen, M.H.; Larsen, Thomas Ostenfeld.

    In: Dansk Kemi, Vol. 90, No. 6/7, 2009, p. 6-8.

    Publication: Communication › Journal article – Annual report year: 2009

  414. Published

    Svampe producerer naturlige farvestoffer til fødevarer. / Jørgensen, Susan Blom (Editor); Mapari, Sameer Shamsuddin.

    In: FoodDTU Midt i Ugen, 2009.

    Publication: Communication › Journal article – Annual report year: 2009

  415. Published

    Synthesis and Structure-Activity Relationship of Griseofulvin Analogues as Inhibitors of Centrosomal Clustering in Cancer Cells. / Rønnest, Mads Holger; Rebacz, Blanka; Markworth, Lene; Terp, Anette Hinsch; Larsen, Thomas Ostenfeld; Krämer, A.; Clausen, Mads Hartvig.

    In: Journal of Medicinal Chemistry, Vol. 52, No. 10, 2009, p. 3342-3347.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  416. Published

    Synthetic Promoter Library for modulation of actinorhodin production in Streptomyces coelicolorA3(2). / Sohoni, Sujata Vijay; Mijakovic, Ivan; Eliasson Lantz, Anna.

    2009. Poster session presented at 15th International symposium on the biology of actinomycetes, Shanghai, China, .

    Publication: Research › Poster – Annual report year: 2009

  417. Published

    Systemic analysis of the response of Aspergillus niger to ambient pH. / Andersen, Mikael Rørdam; Lehmann, Linda Olkjær; Nielsen, Jens.

    In: Genome Biology, Vol. 10, No. 5, 2009, p. R47.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  418. Published

    Targeted sulphur and selenium speciation in yeast by parallel elemental and molecular mass spectrometry. / Hillestrøm, Peter René; Mapelli, Valeria; Olsson, Lisbeth; Larsen, Erik Huusfeldt.

    2009. Poster session presented at 2009 European Winter Conference on Plasma Spectrochemistry, Graz, Austria.

    Publication: Research › Poster – Annual report year: 2009

  419. Published

    The 2008 update of the Aspergillus nidulans genome annotation: A community effort. / Wortman, Jennifer Russo; Gilsenan, Jane Mabey; Joardar, Vinita; Deegan, Jennifer; Clutterbuck, John; Andersen, Mikael Rørdam; Archer, David; Bencina, Mojca; Braus, Gerhard; Coutinho, Pedro; von Döhren, Hans; Doonan, John; Driessen, Arnold J.M.; Durek, Pawel; Espeso, Eduardo; Fekete, Erzsébet; Flipphi, Michel; Estrada, Carlos Garcia; Geysens, Steven; Goldman, Gustavo; de Groot, Piet W.J.; Hansen, Kim; Harris, Steven D.; Heinekamp, Thorsten; Helmstaedt, Kerstin; Henrissat, Bernard; Hofmann, Gerald; Homan, Tim; Horio, Tetsuya; Horiuchi, Hiroyuki; James, Steve; Jones, Meriel; Karaffa, Levente; Karányi, Zsolt; Kato, Masashi; Keller, Nancy; Kelly, Diane E.; Kiel, Jan A.K.W.; Kim, Jung-Mi; van der Klei, Ida J.; Klis, Frans M.; Kovalchuk, Andriy; Kraševec, Nada; Kubicek, Christian P.; Liu, Bo; MacCabe, Andrew; Meyer, Vera; Mirabito, Pete; Miskei, Márton; Mos, Magdalena; Mullins, Jonathan; Nelson, David R.; Nielsen, Jens; Oakley, Berl R.; Osmani, Stephen A.; Pakula, Tiina; Paszewski, Andrzej; Paulsen, Ian; Pilsyk, Sebastian; Pócsi, István; Punt, Peter J.; Ram, Arthur F.J.; Ren, Qinghu; Robellet, Xavier; Robson, Geoff; Seiboth, Bernhard; van Solingen, Piet; Specht, Thomas; Sun, Jibin; Taheri-Talesh, Naimeh; Takeshita, Norio; Ussery, Dave; vanKuyk, Patricia A.; Visser, Hans; van de Vondervoort, Peter J.I.; de Vries, Ronald P.; Walton, Jonathan; Xiang, Xin; Xiong, Yi; Ping Zeng, An; Brandt, Bernd W.; Cornell, Michael J.; van den Hondel, Cees A.M.J.J.; Visser, Jacob; Oliver, Stephen G.; Turner, Geoffrey.

    In: Fungal Genetics and Biology, Vol. 46, No. 1, 2009, p. 2-13.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  420. Published

    Transcription factors as targets for improving Aspergillus niger as cell factory. / Poulsen, Lars; Bruno, K.S.; Thykær, Jette; Baker, S.E.; Eliasson Lantz, Anna.

    2009. Poster session presented at SYSTEMS BIOLOGY AS A DRIVER FOR INDUSTRIAL BIOTECHNOLOGY, Istanbul, Turkey, .

    Publication: Research › Poster – Annual report year: 2009

  421. Published

    Uncovering transcriptional regulation of glycerol metabolism in Aspergilli through genome-wide gene expression data anlysis. / Salazar, Margarita Pena; Vongsangnak, Wanwipa; Panagiotou, Gianni; Andersen, Mikael Rørdam; Nielsen, Jens.

    In: Molecular Genetics and Genomics, Vol. 282, No. 6, 2009, p. 571-586.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  422. Published

    Vibrio vulnificus produces quorum sensing signals of the AHL-class. / Valiente, E.; Bruhn, Jesper Bartholin; Nielsen, Kristian Fog; Larsen, Jens Lauritz; Roig, F. J.; Gram, Lone; Amaro, C.

    In: FEMS Microbiology Ecology, Vol. 69, No. 1, 2009, p. 16-26.

    Publication: Research - peer-review › Journal article – Annual report year: 2009

  423. 2008
  424. Published

    Systems biology studies of Aspergilli - from sequence to science. / Andersen, Mikael Rørdam; Nielsen, Jens (Supervisor); Nielsen, Michael Lynge (Supervisor).

    2008. 500 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2008

  425. Published

    Consequential life cycle inventory modelling of land use induced by crop consumption. / Kløverpris, Jesper Hedal; Wenzel, Henrik (Supervisor); Nielsen, Jens (Supervisor); Hauschild, Michael Zwicky (Supervisor).

    Kgs. Lyngby : DTU Management, 2008. 183 p. (PhD thesis; No. 4.2010).

    Publication: Research › Ph.d. thesis – Annual report year: 2008

  426. Published

    Metabolome analysis - mass spectrometry and microbial primary metabolites. / Højer-Pedersen, Jesper Juul; Nielsen, Jens (Supervisor); Smedsgaard, Jørn (Supervisor).

    2008. 118 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2008

  427. Published

    Establishment of Yeast Platform for Isoprenoid Production. / Asadollahi, Mohammadali; Nielsen, Jens (Supervisor); Møller, Kasper (Supervisor).

    2008. 154 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2008

  428. Published

    Creation of an organic acid production platform in Aspergillus niger using a system-level approach. / Meijer, Susan Lisette; Nielsen, Jens (Supervisor); Olsson, Lisbeth (Supervisor).

    2008. 300 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2008

  429. Published

    Biomass degrading enzymes from Penicillium – cloning and characterization. / Krogh, Kristian Bertel Rømer; Olsson, Lisbeth (Supervisor).

    2008. 196 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2008

  430. Published

    The Snf1 Protein Kinase in the Yeast Saccharomyces cerevisiae. / Usaite, Renata; Olsson, Lisbeth (Supervisor); Nielsen, Jens (Supervisor).

    2008. 115 p.

    Publication: Research › Ph.d. thesis – Annual report year: 2008

  431. Published

    A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology. / Herrgard, Markus; Swainston, Neil; Dobson, Paul; Dunn, Warwick B.; Arga, K Yalçin; Arvas, Mikko; Blüthgen, Nils; Borger, Simon; Costenoble, Roeland; Heinemann, Matthias; Hucka, Michael; Le Novère, Nicolas; Li, Peter; Liebermeister, Wolfram; Mo, Minica L.; Soberano de Oliveira, Ana Paula; Petranovic, Dina; Pettifer, Stephen; Simeonidis, Evangelos; Smallbone, Kieran; Spasić, Irena; Weichart, Dieter; Brent, Roger; Broomhead, David S.; Westerhoff, Hans V.; Kirdar, Betül; Penttilä, Merja; Klipp, Edda; Palsson, Bernhard Ø.; Sauer, Uwe; Oliver, Stephen G.; Mendes, Pedro; Nielsen, Jens; Kell, Douglas B.

    In: Nature Biotechnology, Vol. 26, No. 10, 2008, p. 1155-1160.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  432. Published

    Adaption of Saccharomyces cerevisiae expressing a heterologous protein. / Krogh, Astrid Mørkeberg; Beck, Vibe; Højlund Christensen, Lars; Henriksen, Claus Maxel; Møller, Kasper; Olsson, Lisbeth.

    In: Journal of Biotechnology, Vol. 137, No. 1-4, 2008, p. 28-33.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  433. Published

    An additional phosphotyrosine protein prosphatase (ptp) is present in Streptomyces coelicolor A3(2). / Sohoni, Sujata Vijay; Mijakovic, Ivan; Eliasson Lantz, Anna.

    2008. Poster session presented at National Products Discovery & Production ll, Whstler, British Columbia, Canada, .

    Publication: Research - peer-review › Poster – Annual report year: 2008

  434. Published

    Analysis of Aspergillus nidulans metabolism at the genome-scale. / David, Helga Susana Moreira; Ozcelik, İlknur Ş; Hofmann, Gerald; Nielsen, Jens.

    In: BMC Genomics, Vol. 9, 2008, p. 163.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  435. Published

    Analysis of Fusarium avenaceum metabolites produced during wet apple core rot. / Sørensen, Jens Laurids; Phipps, Richard Kerry; Nielsen, Kristian Fog; Schroers, H. J.; Thrane, Ulf.

    2008. Abstract from 10th International Fusarium Workshop and Fusarium Genomics Workshop, Alghero, Italy, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  436. Published

    An integrated “Low volume high throughput cultivation platform” for industrial systems biology: Streptomyces coelicolor a case study. / Bapat, Prashant Madhusudhan; Sohoni, Sujata Vijay; Eliasson Lantz, Anna.

    2008. Abstract from Metabolic engineering VII, Puerto Vallarta, Mexico, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  437. Published

    Antibiotic Overproduction in Steptomyces coelicolor A3(2) Mediated by Phosphofructokinase Deletion. / Borodina, Irina; Siebring, Jeroen; Zhang, Jie; Smith, Colin P.; van Keulen, Geertje; Dijkhuizen, Lubbert; Nielsen, Jens.

    In: Journal of Biological Chemistry, Vol. 283, No. 37, 2008, p. 25186-25199.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  438. Published

    Architecture of transcriptional regulatory circuits is knitted over the topology of bio-molecular interaction networks. / Soberano de Oliveira, Ana Paula; Patil, Kiran Raosaheb; Nielsen, Jens.

    In: BMC Systems Biology, Vol. 2, 2008, p. 17.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  439. Published

    Aspergillus uvarum sp. nov., an uniseriate black Aspergillus species isolated from grapes in Europe. / Perrone, Giancarlo; Varga, János; Susca, Antonia; Frisvad, Jens Christian; Stea, Gaetano; Kocsube, Sándor; Tóth, Beáta; Kozakiewicz, Zofia; Samson, Robert A.

    In: International Journal of Systematic and Evolutionary Microbiology, Vol. 58, No. 4, 2008, p. 1032-1039.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  440. Published

    A trispecies Aspergillus microarray: Comparative transcriptomics of three Aspergillus species. / Andersen, Mikael Rørdam; Vongsangnak, Wanwipa; Panagiotou, Gianni; Salazar, Margarita Pena; Lehmann, Linda Olkjær; Nielsen, Jens.

    In: National Academy of Sciences. Proceedings, Vol. 105, No. 11, 2008, p. 4387-4392.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  441. Published

    Characterization of global yeast quantitative proteome data generated from the wild-type and glucose repression Saccharomyces cerevisiae strains: The comparison of two quantitative methods. / Usaite, Renata; Wohlschlegel, James; Venable, John D.; Park, Sung K.; Nielsen, Jens; Olsson, Lisbeth; Yates, John R.

    In: Journal of Proteome Research, Vol. 7, No. 1, 2008, p. 266-275.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  442. Published

    Cloning and Functional Characterization of Fungal Feruloyl Esterase. / Lingasamy, Prakash; Nielsen, Michael Lynge; Maury, Jerome; Olsson, Lisbeth; Panagiotou, Gianni.

    2008. Abstract from 3rd Danish Conference on Biotechnology and Molecular Biology, Vejle, Denmark.

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  443. Published

    Cold-adapted fungi as a source for valuable metabolites. / Frisvad, Jens Christian.

    In: Psychrophiles: From Biodiversity to Biotechnology. ed. / R. Margesin; F. Schinner; J.-C. Marx; C. Gerday. Berlin : Springer, 2008. p. 381-387.

    Publication: Research - peer-review › Book chapter – Annual report year: 2008

  444. Published

    Combination of statistical approaches for analysis of 2-DE data gives complementary results. / Grove, Harald; Jørgensen, Bo; Jessen, Flemming; Søndergaard, Ib; Jacobsen, Susanne; Hollung, Kristin; Indahl, Ulf; Færgestad, Ellen M.

    In: Journal of Proteome Research, Vol. 7, No. 12, 2008, p. 5119-5124.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  445. Published

    Comparison of SHF and SSF processes from steam-exploded wheat straw for ethanol production by xylose-fermenting and robust glucose-fermenting Saccharomyces cerevisiae strains. / Tomas Pejo, Elia; Oliva, Jose M.; Ballesteros, Mercedes; Olsson, Lisbeth.

    In: Biotechnology and Bioengineering (Print), Vol. 100, No. 6, 2008, p. 1122-1131.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  446. Published

    Computerized screening for novel producers of Monascus-like food pigments in Penicillium species. / Mapari, Sameer Shamsuddin; Hansen, Michael Adsetts Edberg; Meyer, Anne S.; Thrane, Ulf.

    In: Journal of Agricultural and Food Chemistry, Vol. 56, No. 21, 2008, p. 9981-9989.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  447. Published

    Cork fungal diversity and characterization. / Basilio, Carmo; Houbraken, J.; Samson, R.; Frisvad, Jens Christian; Tenreiro, R.; Crespo, M. T. B.; San Romao, V.

    2008. Abstract from CBS Symposium Fungi and Health, Amsterdam, Netherlands.

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  448. Published

    Critical evaluation and comparison of fluid distribution systems for industrial scale expanded bed adsorption chromatography columns. / Arpanaei, Ayyoob; Heebøll-Nielsen, Anders; Hubbuch, Jürgen; Thomas, Owen R. T.; Hobley, Timothy John.

    In: Journal of Chromatography A, Vol. 1198-1199, 2008, p. 131-139.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  449. Published

    Deleting the para-nitrophenyl phosphatase (pNPPase), PHO13, in recombinant Saccharomyces cerevisiae improves growth and ethanol production on D-xylose. / Van Vleet, Jennifer; Jeffries, T.W.; Olsson, Lisbeth.

    In: Metabolic Engineering, Vol. 10, No. 6, 2008, p. 360-369.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  450. Published

    Dereplication Strategies for Discovery of Marine Microbial Natural Products. / Johansen, Maria; Nielsen, Kristian Fog; Hansen, Michael Adsetts Edberg; Lyhne, Ellen Kirstine; Larsen, Thomas Ostenfeld; Vynne, Nikolaj Grønnegaard; Melchiorsen, Jette; Gram, Lone.

    2008. Abstract from Gordon Conference in Marine Natural Products, Ventura Beach, California, U.S.A, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  451. Published

    Determination of adsorbed protein concentration in aluminum hydroxide suspensions by near-infrared transmittance Spectroscopy. / Lai, Xuxin; Zheng, Yiwu; Jacobsen, Susanne; Larsen, Jørgen N.; Ipsen, Henrik; Løwenstein, Henning; Søndergaard, Ib.

    In: Applied Spectroscopy, Vol. 62, No. 7, 2008, p. 784-790.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  452. Published

    Determination of Ergot Alkaloids: Purity and Stability Assessment of Standards and Optimization of Extraction Conditions for Cereal Samples. / Krska, R.; Berthiller, F.; Schuhmacher, R.; Nielsen, Kristian Fog; Crews, C.

    In: Journal of AOAC International, Vol. 91, No. 6, 2008, p. 1363-1371.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  453. Published

    Determination of moisture content of lyophilized allergen vaccines by NIR spectroscopy. / Zheng, Yiwu; Lai, Xuxin; Bruun, Susanne Wrang; Ipsen, Henrik; Larsen, Jørgen Nedergaard; Løwenstein, Henning; Søndergaard, Ib; Jacobsen, Susanne.

    In: Journal of Pharmaceutical and Biomedical Analysis, Vol. 46, No. 3, 2008, p. 592-596.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  454. Published

    Determination of mycophenolic acid in mest products using mixed mode reversed phase-anion exchange clean-up and liquid chromatography-high-resolution mass spectrometry. / Sørensen, Louise Marie; Nielsen, Kristian Fog; Jacobsen, Thomas; Koch, Anette Granly; Nielsen, Per Væggemose; Frisvad, Jens Christian.

    In: Journal of Chromatography A, Vol. 1205, No. 1-2, 2008, p. 103-108.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  455. Published

    Development of a LC-MS/MS Method for the Analysis of Enniatins and Beauvericin in Whole Fresh and Ensiled Maize. / Sørensen, Jens Laurids; Nielsen, Kristian Fog; Rasmussen, Peter Have; Thrane, Ulf.

    In: Journal of Agricultural and Food Chemistry, Vol. 56, No. 21, 2008, p. 10439-10443.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  456. Published

    Development of a robust “scaled-down” cultivation platform for Streptomyces via morphology engineering. / Bapat, Prashant Madhusudhan; Patil, Kiran Raosaheb; Thykær, Jette; Eliasson Lantz, Anna.

    2008. Abstract from Natural Products Discovery and Production II, Whistler, British Columbia, Canada, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  457. Published

    Development of a synthetic lethality screen to uncover key genes in filamentous fungi. / Jensen, Rasmus Hare; Nielsen, Michael Lynge; Mortensen, Uffe Hasbro.

    2008. Poster session presented at Symposium for Biotech Research 2008, Lyngby, Denmark, .

    Publication: Research › Poster – Annual report year: 2008

  458. Published

    Development of a synthetic lethality screen to uncover key genes in filamentous fungi. / Jensen, Rasmus Hare; Nielsen, Michael Lynge; Mortensen, Uffe Hasbro.

    2008. Abstract from Symposium for Biotech Research, Lyngby, Denmark, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  459. Published

    Development of continuous culture microbioreactors. / Schäpper, Daniel (Author); Gernaey, Krist (Author); Eliasson Lantz, Anna (Author); Stocks, Stuart (Author); Szita, Nicolas (Author).

    2008. 7th European Symposium on Biochemical Engineering Science, Faro, Portugal, 07-09-08.

    Publication: Research › Sound/Visual production (digital) – Annual report year: 2008

  460. Published

    DNA binding during expanded bed adsorption and factors affecting adsorbent aggregation. / Arpanaei, Ayyoob; Mathiasen, N.; Hobley, Timothy John.

    In: Journal of Chromatography A, Vol. 1203, No. 2, 2008, p. 198-206.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  461. Published

    Dormancy of cells and organisms - Strategies for survival and preservation - Sleeping Beauty. / Lubzens, E.; Hadas, O.; Sukenik, A.; Cerda, J.; Hohmann, S.; Worland, R.; Clark, M.S.; Reinhardt, R.; Nielsen, Kristian Fog.

    In: Comparative Biochemistry and Physiology A, Vol. 151, No. 1, 2008, p. S34-S35.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2008

  462. Published

    Effects of antibiotics on quorum sensing in pseudomonas aeruginosa. / Skindersø, Mette Elena; Alhede, Morten; Phipps, Richard Kerry; Yang, Liang; Jensen, Peter O.; Bjarnsholt, Thomas; Rasmussen, Thomas B.; Tolker-Nielsen, Tim; Høiby, Niels; Givskov, Michael Christian.

    In: Antimicrobial Agents and Chemotherapy, Vol. 52, No. 10, 2008, p. 3648-3663.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  463. Published

    Efficient four fragment cloning for the construction of vectors for targeted gene replacement in filamentous fungi. / Frandsen, Rasmus John Normand; Andersson, Jens A.; Kristensen, Matilde Bylov; Giese, Henriette.

    In: BMC Molecular Biology, Vol. 9, 2008, p. 70.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  464. Published

    Ergot alkaloids in rye flour determined by solid-phase cation-exchange and high-pressure liquid chromatography with fluorescence detection. / Storm, Ida Marie Lindhardt Drejer; Rasmussen, Peter Have; Strobel, B.W.; Hansen, H.C.B.

    In: Food Additives and Contaminants, Vol. 25, No. 3, 2008, p. 338-346.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  465. Published

    Evaluating prediction uncertainty of fermentation models. / Sin, Gürkan (Author); Eliasson Lantz, Anna (Author); Gernaey, Krist (Author).

    2008. 7th European Symposium on Biochemical Engineering Science, Faro, Portugal, 07-09-08.

    Publication: Research › Sound/Visual production (digital) – Annual report year: 2008

  466. Published

    Evaluation of Epicoccum nigrum for growth, morphology and production of natural colorants in liquid media and on a solid rice medium. / Mapari, Sameer Shamsuddin; Meyer, Anne S.; Thrane, Ulf.

    In: Biotechnology Letters, Vol. 30, No. 12, 2008, p. 2183-2190.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  467. Published

    Factors affecting the solubility of Bacillus halmapalus alpha-amylase. / Faber, Cornelius; Hobley, Timothy John; Mollerup, Jørgen; Thomas, Owen R. T.; Kaasgaard, S. G.

    In: Chemical Engineering and Processing, Vol. 47, No. 6, 2008, p. 1007-1017.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  468. Published

    Fermentation characteristics of Fusarium oxysporum grown on acetate. / Panagiotou, Gianni; Pachidou, Fotini; Petroutsos, Dimitris; Olsson, Lisbeth; Christakopoulos, Paul.

    In: Bioresource Technology, Vol. 99, No. 15, 2008, p. 7397-7401.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  469. Published

    Four new species of Emericella from the Mediterranean region of Europe. / Zalar, Polona; Frisvad, Jens Christian; Gunde-Cimerman, Nina; Varga, János; Samson, Robert A.

    In: Mycologia, Vol. 100, No. 5, 2008, p. 779-795.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  470. Published

    Fumonisins from Aspergillus niger - a new health risk?. / Mogensen, Jesper Mølgaard; Nielsen, Kristian Fog; Frisvad, Jens Christian; Larsen, Thomas Ostenfeld; Thrane, Ulf; Varga, Janos.

    2008. Poster session presented at CBS Symposium Fungi and Health, Amsterdam, Netherlands.

    Publication: Research › Poster – Annual report year: 2008

  471. Published

    Fumonisins from Aspergillus niger - a new health risk?. / Mogensen, Jesper Mølgaard; Nielsen, Kristian Fog; Frisvad, Jens Christian; Larsen, Thomas Ostenfeld; Thrane, Ulf; Varga, Janos.

    2008. Abstract from CBS Symposium Fungi and Health, Amsterdam, Netherlands.

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  472. Published

    Functional analysis of transporter-like sugar sensors in Saccharomyces cerevisiae. / Karhumaa, Kaisa; Wu, Boqian; Kielland-Brandt, Morten.

    2008. Abstract from 26th Small Meeting Yeast Transport and Energetics, Braga, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  473. Published

    Fungal genome sequencing and bioenergy. / Baker, Scott E.; Thykær, Jette; Adney, William S.; Brettin, Thomas S.; Brockman, Fred J.; D´haeseleer, Patrik; Martinez, A. Diego; Miller, R. Michael; Rokhsar, Daniel S.; Schadt, Christopher W.; Torok, Tamas; Tuskan, Gerald; Bennett, Joan; Berka, Randy M.; Briggs, Steven P.; Heitman, Joseph; Taylor, John; Turgeon, B. Gillian; Werner-Washburne, Margaret; Himmel, Michael E.

    In: Fungal Biology Reviews, Vol. 22, No. 4, 2008, p. 1-5.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  474. Published

    Fungal pigments in stress response - new therapeutics?. / Nielsen, Jakob Blæsbjerg; Mapari, Sameer Shamsuddin; Nielsen, Michael Lynge; Larsen, Thomas Ostenfeld; Frisvad, Jens Christian; Mortensen, Uffe Hasbro.

    2008. Poster session presented at 3rd Danish Conference on Biotechnology and Molecular Biology, Vejle, Denmark.

    Publication: Research - peer-review › Poster – Annual report year: 2008

  475. Published

    Fungi in cold ecosystems. / Frisvad, Jens Christian.

    In: Psychrophiles: From Biodiversity to Biotechnology. ed. / R. Margesin; F. Schinner; J.-C. Marx; C. Gerday. Berlin : Springer, 2008. p. 137-156.

    Publication: Research - peer-review › Book chapter – Annual report year: 2008

  476. Published

    Fungi on cocoa and their mycotoxin production. / Copetti, Marina Venturini; Taniwaki, M.; Frisvad, Jens Christian.

    2008. Poster session presented at CBS Symposium Fungi and Health, Amsterdam, Netherlands.

    Publication: Research › Poster – Annual report year: 2008

  477. Published

    Fungi on cocoa and their mycotoxin production. / Copetti, Marina Venturini; Taniwaki, M.; Frisvad, Jens Christian.

    2008. Abstract from CBS Symposium Fungi and Health, Amsterdam, Netherlands.

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  478. Published

    Fusarium på korn skader planter, husdyr og mennesker. / Jørgensen, Lise Nistrup; Thrane, Ulf; Collinge, David B.; Jørgensen, Hans Jørgen Lyngs; Jensen, Jens Due; Spliid, Niels Henrik; Nielsen, Ghita Cordsen; Rasmussen, Peter Have; Nicolaisen, Mogens; Justesen, Annemarie F.; Giese, Henriette; Bach, Inga C.

    In: Planteforskning.dk, 2008, p. 1-11.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  479. Published

    Genetic Dissection of Tropodithietic Acid Biosynthesis by Marine Roseobacters. / Geng, Haifeng; Bruhn, Jesper Bartholin; Nielsen, Kristian Fog; Gram, Lone; Belas, Robert.

    In: Applied and Environmental Microbiology, Vol. 74, No. 5, 2008, p. 1535-1545.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  480. Published

    Genome wide analysis of A. niger metabolism during industrial fed-batch fermentations. / Pedersen, Lasse; Hansen, Kim; Nielsen, Kristian Fog; Nielsen, Jens; Thykær, Jette.

    2008. Poster session presented at Metabolic Engineering VII, Puerto Vallarta, Mexico, .

    Publication: Research › Poster – Annual report year: 2008

  481. Published

    GF-15, a Novel Inhibitor of Centrosomal Clustering, Suppresses Tumor Growth in Vivo. / Raab, Marc S.; Breitkreutz, Iris; Rebacz, Blanka; Nguyen, Thu; Hayden, Patrick J.; Clausen, Mads Hartvig; Larsen, Thomas Ostenfeld; Fruehauf, Johannes; Anderson, Kenneth C.; Kraemer, Alwin.

    In: Blood, Vol. 112, No. 11, 2008, p. 578-579.

    Publication: Research - peer-review › Conference abstract in journal – Annual report year: 2008

  482. Published

    Good chemistry between CBS and CMB. / Frisvad, Jens Christian; Thrane, Ulf; Andersen, Birgitte; Samson, R. A.

    2008. Poster session presented at CBS Symposium Fungi and Health, Amsterdam, Netherlands.

    Publication: Research › Poster – Annual report year: 2008

  483. Published

    Good chemistry between CBS and CMB. / Frisvad, Jens Christian; Thrane, Ulf; Andersen, Birgitte; Samson, R. A.

    2008. Abstract from CBS Symposium Fungi and Health, Amsterdam, Netherlands.

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  484. Published

    GRISEOFULVIN ANALOGUES FOR THE TREATMENT OF CANCER BY INHIBITION OF CENTROSOMAL CLUSTERING. / Clausen, Mads Hartvig (Inventor); Larsen, Thomas Ostenfeld (Inventor); Krämer, Alvin (Inventor); Rebacz, Blanka (Inventor).

    Patent No.: WO2009000937. Dec 31, 2008.

    Publication: Research › Patent – Annual report year: 2008

  485. Published

    Growth temperature exerts differential physiological and transcriptional responses in laboratory and wine strains of Saccharomyces cerevisiae. / Pizarra, Francisco J.; Jewett, Michael Christopher; Nielsen, Jens; Agosin, Eduardo.

    In: Applied and Environmental Microbiology, Vol. 74, No. 20, 2008, p. 6358-6368.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  486. Published

    Heterologous expression of polyketides in fungi and optimization by using in silico analysis. / Mølgaard, Louise; Hansen, Bjarne Gram; Mortensen, Uffe Hasbro; Patil, Kiran Raosaheb.

    2008. Poster session presented at Metabolic Engineering VII, Puerto Vallarta, Mexico, .

    Publication: Research › Poster – Annual report year: 2008

  487. Published

    High incidence of Fusarium avenaceum (Nectriaceae, Gibberella) and moniliformin in apples with wet core rot symptoms. / Schroers, H. J.; Sørensen, Jens Laurids; Thrane, Ulf; Nielsen, Kristian Fog; Zerjav, M.; Munda, A.; Frank, J.

    2008. Poster session presented at 9th international Congress of Plant Pathology (ICPP 2008), Torino, Italy, .

    Publication: Research › Poster – Annual report year: 2008

  488. Published

    High incidence of Fusarium avenaceum (Nectriaceae, Gibberella) and moniliformin in apples with wet core rot symptoms. / Schroers, H. J.; Sørensen, Jens Laurids; Thrane, Ulf; Nielsen, Kristian Fog; Zerjav, M.; Munda, A.; Frank, J.

    2008. Abstract from 9th international Congress of Plant Pathology (ICPP 2008), Torino, Italy, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  489. Published

    High-throughput strategies for construction of mutant libraries in filamentous fungi. / Nielsen, Michael Lynge; Nielsen, Jakob Blæsbjerg; Hansen, Bjarne Gram; Mortensen, Uffe Hasbro.

    2008. Abstract from Fungal Biology and Biotechnology in the Genomic Era, Sant Feliu de Guixols, Spain, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  490. Published

    Hydrolysis of Cellulose Using Mono-Component Enzymes Shows Synergy during Hydrolysis of Phosphoric Acid Swollen Cellulose (PASC), but Competition on Avicel. / Andersen, Natalija; Johansen, Katja S.; Michelsen, Michael Locht; Stenby, Erling Halfdan; Krogh, Kristian B.R.M.; Olsson, Lisbeth.

    In: Enzyme and Microbial Technology, Vol. 42, No. 4, 2008, p. 362-370.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  491. Published

    Hyper- and hyporesponsive mutant forms of the Saccharomyces cerevisiae Ssy1 amino acid sensor. / Poulsen, Peter; Gaber, Richard F.; Kielland-Brandt, Morten.

    In: Molecular Membrane Biology, Vol. 25, No. 2, 2008, p. 164-U49.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  492. Published

    Identification of biomarkers for genotyping Aspergilli using non-linear methods for clustering and classification. / Kouskoumvekaki, Irene; Yang, Zhiyong; Jonsdottir, Svava Osk; Olsson, Lisbeth; Panagiotou, Gianni.

    In: BMC Bioinformatics, Vol. 9, 2008, p. 59.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  493. Published

    Identification of NADH kinase activity in filamentous fungi and structural modelling of the novel enzyme from Fusarium oxysporum. / Panagiotou, Gianni; Papadakis, Emmanouil; Topakas, E.; Olsson, Lisbeth; Christakopoulos, P.

    In: Process Biochemistry, Vol. 43, No. 10, 2008, p. 1114-1120.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  494. Published

    Impact of systems biology on metabolic engineering of Saccharomyces cerevisiae. / Nielsen, Jens; Jewett, Michael Christopher.

    In: FEMS Yeast Research, Vol. 8, No. 1, 2008, p. 122-131.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  495. Published

    Implications of high-temperature and drought events for yield and quality in wheat. / Wollenweber, Bernd; Jiang, Dong; Jacobsen, Susanne; Søndergaard, Ib; Porter, J.

    2008. Abstract from The International Symposium on Crop Modelling and Decision Support, Nanjing Agricultural University, China, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  496. Published

    Improved annotation through genome-scale metabolic modeling of Aspergillus oryzae. / Vongsangnak, Wanwipa; Olsen, Peter; Hansen, Kim; Krogsgaard, Steen; Nielsen, Jens.

    In: BMC Genomics, Vol. 9, 2008, p. 245.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  497. Published

    Improving Sesquiterpene Production in Saccharomyces cerevisiae through integration of the MEP Pathway. / Formenti, Luca Riccardo; Maury, Jerome; Asadollahi, Mohammadali; Nielsen, Kristian Fog; Nielsen, Jens; Kielland-Brandt, Morten; Schalk, Michel; Clark, Anthony.

    2008. Poster session presented at Metabolic Engineering : Health and Sustainability, Puerto Vallarta, Mexico, .

    Publication: Research › Poster – Annual report year: 2008

  498. Published

    Improving Sesquiterpene Production in Saccharomyces cerevisiae through integration of the MEP Pathway. / Formenti, Luca Riccardo; Maury, Jerome; Asadollahi, Mohammadali; Nielsen, Kristian Fog; Nielsen, Jens; Kielland-Brandt, Morten; Schalk, Michel; Clark, Anthony.

    2008. Abstract from Metabolic Engineering : Health and Sustainability, Puerto Vallarta, Mexico, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  499. Published

    Insights in short term evolution of Aspergillus niger strains. / van de Vondervoort, P.; Andersen, Mikael Rørdam; Baker, S.E.; Meijer, M..; van Peijn, N.; Pel, H.; Robus, H.; Samson, R.; Schaap, P.

    2008. Poster session presented at 5th International Aspergillus meeting, Edinburgh, United Kingdom.

    Publication: Research › Poster – Annual report year: 2008

  500. Published

    Insights in short term evolution of Aspergillus niger strains. / van de Vondervoort, P.; Andersen, Mikael Rørdam; Baker, S. E.; Meijer, M.; van Peijn, n.; Pel, H.; Robus, H.; Samson, R.; Schaap, P.

    2008. Abstract from 5th International Aspergillus meeting, Edinburgh, United Kingdom.

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  501. Published

    Interaction with RPA Is Necessary for Rad52 Repair Center Formation and for Its Mediator Activity. / Plate, Iben; Hallwyl, Swee Chuang Lim; Shi, Idina; Krejci, Lumir; Müller, Christian; Albertsen, Line; Sung, Patrick; Mortensen, Uffe Hasbro.

    In: The Journal of Biological Chemistry, Vol. 283, No. 43, 2008, p. 29077-29085.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  502. Published

    Interpretation of electrospray spectra - Getting the molecular mass correct each time - learning from a library of 800 microbial metabolites. / Nielsen, Kristian Fog (Invited author).

    2008. Abstract from Danske Symposium i Analytisk Kemi, Lyngby, Denmark, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  503. Published

    Intracellular glucose inhibits sensing of extracellular glucose through transporter-like sensor Snf3. / Karhumaa, Kaisa; Wu, Boqian; Kielland-Brandt, Morten.

    2008. Abstract from 12th International Congress on Yeasts, Kiev, .

    Publication: Research › Conference abstract for conference – Annual report year: 2008

  504. Published

    Isolation, identification and toxigenic potential of ochratoxin A-producing Aspergillus species from coffee beans grown in two regions of Thailand. / Noonim, P.; Mahakarnchanakul, W.; Nielsen, Kristian Fog; Frisvad, Jens Christian; Samson, R. A.

    In: International Journal of Food Microbiology, Vol. 128, No. 2, 2008, p. 197-202.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  505. Published

    Matrix Notation for Efficient Development of First-Principles Models Within PAT Applications: Integrated Modeling of Antibiotic Production With Streptomyces coelicolor. / Sin, Gürkan; Ödman, Peter; Petersen, Nanna; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Biotechnology and Bioengineering (Print), Vol. 101, 2008, p. 153-171.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

  506. Published

    Metabolic footprinting in microbiology: methods and applications in functional genomics and biotechnology. / Mapelli, Valeria; Olsson, Lisbeth; Nielsen, Jens.

    In: Trends in Biotechnology, Vol. 26, No. 9, 2008, p. 490-497.

    Publication: Research - peer-review › Journal article – Annual report year: 2008

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