Center for Microbial Biotechnology

  1. 2014
  2. Published
  3. Published

    A novel platform for heterologous gene expression in Trichoderma reesei (Teleomorph Hypocrea jecorina). / Jørgensen, Mikael Skaanning; Skovlund, Dominique Aubert; Johannesen, Pia Francke; Mortensen, Uffe Hasbro.

    In: Microbial Cell Factories, Vol. 13, No. 1, 2014, p. 33.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  4. Published

    Assessment of aflatoxigenicAspergillusand other fungi in millet and sesame from Plateau State, Nigeria. / Ezekiel, C.N.; Udom, I.E.; Frisvad, Jens Christian; Adetunji, M.C.; Houbraken, J.; Fapohunda, S.O.; Samson, R.A.; Atanda, O.O.; Agi-Otto, M.C.; Onashile, O.A.

    In: Mycology, Vol. 5, No. 1, 2014, p. 16-22.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  5. E-pub ahead of print
  6. Published

    Phenotypic differentiation of species from Aspergillus section Flavi on neutral red desiccated coconut agar. / Atanda, O. O.; Adetunji, M. C.; Ezekiel, C. N.; Houbraken, J.; Frisvad, Jens Christian; Samson, R. A.

    In: World Mycotoxin Journal, Vol. 7, No. 3, 2014, p. 335-344.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  7. 2013
  8. Published
  9. Published

    A Mild Method for Regioselective Labeling of Aromatics with Radioactive Iodine. / Rønnest, Mads Holger; Nissen, Felix; Pedersen, Palle Jacob; Larsen, Thomas Ostenfeld; Mier, Walter; Clausen, Mads Hartvig.

    In: European Journal of Organic Chemistry, Vol. 2013, No. 19, 2013, p. 3970-3973.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  10. Published

    Applying mechanistic models in bioprocess development.. / Lencastre Fernandes, Rita; Bodla, Vijaya Krishna; Carlquist, Magnus; Heins, Anna-Lena; Eliasson Lantz, Anna; Sin, Gürkan; Gernaey, Krist V.

    Advances in Biochemical Engineering/Biotechnology . Springer, 2013. p. 137–166 (Advances in Biochemical Engineering. Biotechnology, Vol. 132).

    Publication: Research - peer-reviewBook chapter – Annual report year: 2013

  11. Published

    A universal fixation method based on quaternary ammonium salts (RNAlater) for omics-technologies: Saccharomyces cerevisiae as a case study. / Eijsden, Rudy G. E. van; Stassen, Catherine; Daenen, Luk; Mulders, Sebastiaan E. Van; Bapat, Prashant Madhusudhan; Siewers, Verena; Goossens, Katty V. Y.; Nielsen, Jens; Delvaux, Freddy R.; Hummelen, Paul Van; Devreese, Bart; Willaert, Ronnie G.

    In: Biotechnology Letters, Vol. 35, No. 6, 2013, p. 891-900.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  12. Published

    A validated system for ligation-free USER™ -based assembly of expression vectors for mammalian cell engineering. / Lund, Anne Mathilde; Kildegaard, Helene Faustrup; Hansen, Bjarne Gram; Holm, Dorte Koefoed; Andersen, Mikael Rørdam; Mortensen, Uffe Hasbro.

    2013. Poster session presented at 23rd ESACT meeting, Lille, France.

    Publication: Research - peer-reviewPoster – Annual report year: 2013

  13. Published

    Bacillus amyloliquefaciens ssp. plantarum strains as potential protective starter cultures for the production of Bikalga, an alkaline fermented food. / Compaor, C.S.; Nielsen, D.S.; Sawadogo-Lingani, H.; Berner, T. S.; Nielsen, Kristian Fog; Adimpong, David Bichala; Diawara, B.; Ouedraogo, G.A.; Jakobsen, M.; Thorsen, L.

    In: Journal of Applied Microbiology, Vol. 115, No. 1, 2013, p. 133-146.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  14. Published

    Cell mass and cell cycle dynamics of an asynchronous budding yeast population : Experimental observations, flow cytometry data analysis, and multi-scale modeling. / Lencastre Fernandes, Rita; Carlquist, Magnus; Lundin, Luisa; Heins, Anna-Lena; Dutta, Abhishek; Sørensen, Søren J.; Jensen, Anker Degn; Nopens, Ingmar; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Biotechnology and Bioengineering (Print), Vol. 110, No. 3, 2013, p. 812-826.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  15. Published

    Characterization of microbial communities and fungal metabolites on field grown strawberries from organic and conventional production. / Jensen, Birgit; Knudsen, Inge M. B.; Andersen, Birgitte; Nielsen, Kristian Fog; Thrane, Ulf; Jensen, Dan Funck; Larsen, John.

    In: International Journal of Food Microbiology, Vol. 160, No. 3, 2013, p. 313-322.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  16. Published

    Co-production of surfactin and a novel bacteriocin by Bacillus subtilis subsp. subtilis H4 isolated from bikalga, an African alkaline Hibiscus sabdariffa seed fermented condiment.. / Compaore, C. S.; Nielsen, Dennis S.; Ouoba, L. I. I.; Berner, Torben Sune; Nielsen, Kristian Fog; Sawadogo-Lingani, H.; Diawara, B.; Ouedraogo, G. A.; Jakobsen, Mogens; Thorsen, Line.

    In: International Journal of Food Microbiology, Vol. 162, No. 3, 2013, p. 297-307.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  17. Published

    Cytotoxicity and mycotoxin production of shellfish‐derived Penicillium spp., a risk for shellfish consumers. / Geiger, M.; Guitton, Y.; Vansteelandt, M.; Kerzaon, I.; Blanchet, E.; Robiou du Pont, T.; Frisvad, Jens Christian; Hess, P.; Pouchus, Y.F.; Grovel, O.

    In: Letters in Applied Microbiology, Vol. 57, No. 5, 2013, p. 385-392.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  18. Published
  19. Published

    Heterologous expression and characterization of bacterial 2-C-methyl-d-erythritol-4-phosphate pathway in Saccharomyces cerevisiae. / Carlsen, Simon; Ajikumar, Parayil Kumaran; Formenti, Luca Riccardo; Zhou, Kang; Phon, Too Heng; Nielsen, Michael Lynge; Eliasson Lantz, Anna; Kielland-Brandt, Morten; Stephanopoulos, Gregory.

    In: Applied Microbiology and Biotechnology, Vol. 97, No. 13, 2013, p. 5753-5769.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  20. Published

    Multilocus phylogeny and MALDI-TOF analysis of the plant pathogenic species Alternaria dauci and relatives. / Brun, Sophie; Madrid, Hugo; Gerrits Van Den Ende, Bert; Andersen, Birgitte; Marinach-Patrice, Carine; Mazier, Dominique; De Hoog, G. Sybren.

    In: Fungal Biology, Vol. 117, No. 1, 2013, p. 32-40.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  21. Published

    One Fungus, One Name: Defining the Genus Fusarium in a Scientifically Robust Way That Preserves Longstanding Use.. / Geiser, David M.; Aoki, Takayuki; Bacon, Charles W.; E. Baker, Scott; Bhattacharyya, Madan K.; Brandt, Mary E.; Brown, Daren W. ; Burgess, Lester W. ; Chulze, Sofia ; Coleman, Jeffrey J. ; Correll, James C. ; Covert, Sarah F. ; Crous, Pedro W. ; Cuomo, Christina A.; Sybren De Hoog, G.; Di Pietro, Antonio; Elmer, Wade H. ; Epstein, Lynn; Frandsen, Rasmus John Normand; Freeman, Stanley; Gagkaeva, Tatiana; Glenn, Anthony E.; Gordon, Thomas R.; Gregory, Nancy F.; Hammond-Kosack, Kim E.; Hanson, Linda E. ; Jímenez-Gasco, María del Mar; Kang, Seogchan; Kistler, H. Corby ; Kuldau, Gretchen A.; Leslie, John F. ; Logrieco, Antonio; Lu, Guozhong; Lysøe, Erik; Ma, Li-Jun; P. McCormick, Susan; Migheli, Quirico; Moretti, Antonio; Munaut, Françoise; O'Donnell, Kerry; Pfenning, Ludwig; Ploetz, Randy C. ; Proctor, Robert H. ; Rehner, Stephen A. ; Robert, Vincent A. R. G. ; Rooney, Alejandro P. ; Salleh, Baharuddin bin ; Scandiani, Maria Mercedes ; Scauflaire, Jonathan; Short, Dylan P. G.; Steenkamp, Emma; Suga, Haruhisa; Summerell, Brett A. ; Sutton, Deanna A.; Thrane, Ulf; Trail, Francis; Diepeningen, Anne Van ; VanEtten, Hans D. ; Viljoen, Altus; Waalwijk, Cees; Ward, Todd J.; Wingfield, Michael J. ; Xu, Jin-Rong; Yang, Xiao-Bing ; Yli-Mattila, Tapani; Zhang, Ning.

    In: Phytopathology, Vol. 103, No. 5, 2013, p. 400-408.

    Publication: Research - peer-reviewLetter – Annual report year: 2013

  22. Published

    Penicillium subrubescens, a new species efficiently producing inulinase. / Mansouri, S.; Houbraken, J.; Samson, R.A.; Frisvad, Jens Christian; Christensen, M.; Tuthill, D. E.; Koutaniemi, S.; Hatakka, A.; Lankinen, P.

    In: Antonie van Leeuwenhoek, Vol. 103, No. 6, 2013, p. 1343-1357.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  23. Published

    Phylogenetic analyses of RPB1 and RPB2 support a middle Cretaceous origin for a clade comprising all agriculturally and medically important fusaria. / O’Donnell, Kerry; Rooney, Alejandro P.; Proctor, Robert H.; Brown, Daren W.; McCormick, Susan P.; Ward, Todd J.; Frandsen, Rasmus John Normand; Lysøe, Erik; Rehner, Stephen A.; Aoki, Takayuki; Robert, Vincent A.R.G.; Crous, Pedro W.; Groenewald, Johannes Z.; Kang, Seogchan; Geiser, David M.

    In: Fungal Genetics and Biology, Vol. 52, 2013, p. 20-31.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  24. Published

    Phylogenetic relationships among members of the Fusarium solani species complex in human infections and the descriptions of F. keratoplasticum sp. nov. and F. petroliphilum stat. nov.. / Short, Dylan P.G.; O’Donnell, Kerry; Thrane, Ulf; Nielsen, Kristian Fog; Zhang, Ning; Juba, Jean H.; Geiser, David M.

    In: Fungal Genetics and Biology, Vol. 53, 2013, p. 59-70.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  25. Published

    Production of fusarielins by Fusarium. / Sørensen, Jens Laurids; Akk, Elina; Thrane, Ulf; Giese, Henriette; Sondergaard, Teis Esben.

    In: International Journal of Food Microbiology, Vol. 160, No. 3, 2013, p. 206-211.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  26. Published
  27. Published

    RNA-seq based expression analysis of the CHO cell protein secretion pathway. / Lund, Anne Mathilde; Kaas, Christian Schrøder; Kildegaard, Helene Faustrup; Kristensen, Claus; Andersen, Mikael Rørdam.

    2013. Poster session presented at 3rd Annual Next Generation Sequencing Asia Congress, Singapore, Singapore.

    Publication: Research - peer-reviewPoster – Annual report year: 2013

  28. Published

    Saccharomyces cerevisiae–Based Platform for Rapid Production and Evaluation of Eukaryotic Nutrient Transporters and Transceptors for Biochemical Studies and Crystallography. / Scharff-Poulsen, Peter; Pedersen, Per Amstrup.

    In: P L o S One, Vol. 8, No. 10, e76851, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  29. Published

    Screening the Biosphere: The Fungicolous Fungus Trichoderma phellinicola, a Prolific Source of Hypophellins, New 17-, 18-, 19-, and 20-Residue Peptaibiotics. / Röhrich, Christian René ; Iversen, Anita; Jaklitsch, Walter Michael; Voglmayr, Hermann; Vilcinskas, Andreas; Nielsen, Kristian Fog; Thrane, Ulf; Döhren, Hans von ; Brückner, Hans; Degenkolb, Thomas.

    In: Chemistry & Biodiversity, Vol. 10, 2013, p. 787-812.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  30. Published

    The biodiversity of Aspergillus section Flavi in brazil nuts: From rainforest to consumer. / Calderari, Thaiane O.; Iamanaka, Beatriz T.; Frisvad, Jens Christian; Pitt, John I.; Sartori, Daniele; Pereira, Jose Luiz; Fungaro, Maria Helena P.; Taniwaki, Marta H.

    In: International Journal of Food Microbiology, Vol. 160, No. 3, 2013, p. 267-272.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  31. Published

    Two new Penicillium species Penicillium buchwaldii and Penicillium spathulatum, producing the anticancer compound asperphenamate.. / Frisvad, Jens Christian; Houbraken, Jos; Popma, Suuske; Samson, Robert A.

    In: F E M S Microbiology Letters, Vol. 339, No. 2, 2013, p. 77-92.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  32. 2012
  33. Published

    Microbial isoprenoid production. / Carlsen, Simon; Kielland-Brandt, Morten (Supervisor); Eliasson Lantz, Anna (Supervisor); Nielsen, Michael Lynge (Supervisor).

    Department of Systems Biology, DTU, 2012. 263 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2013

  34. Published
  35. Published
  36. Published

    Active Match Load Circuit Intended for Testing Piezoelectric Transformers. / Andersen, Thomas; Rødgaard, Martin Schøler; Andersen, Michael A. E.

    6th IET International Conference on Power Electronics, Machines and Drives. Institution of Engineering and Technology, 2012.

    Publication: Research - peer-reviewArticle in proceedings – Annual report year: 2012

  37. Published

    Adaptive evolution of drug targets in producer and non-producer organisms. / Hansen, Bjarne Gram; Sun, Xin E.; Genee, Hans Jasper; Kaas, Christian Schrøder; Nielsen, Jakob Blæsbjerg; Frisvad, Jens Christian; Hedstrom, Lizbeth.

    In: Biochemical Journal, Vol. 441, No. 1, 2012, p. 219-226.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  38. Published

    Ajoene, a Sulfur-Rich Molecule from Garlic, Inhibits Genes Controlled by Quorum Sensing. / Jakobsen, Tim Holm; van Gennip, Maria; Phipps, Richard Kerry; Shanmugham, Meenakshi Sundaram; Christensen, Louise Dahl; Alhede, Morten; Skindersoe, Mette Eline; Rasmussen, Thomas Bovbjerg; Friedrich, Karlheinz; Uthe, Friedrich; Jensen, Peter Østrup; Moser, Claus Ernst; Nielsen, Kristian Fog; Eberl, Leo; Larsen, Thomas Ostenfeld; Tanner, David; Høiby, Niels; Bjarnsholt, Thomas; Givskov, Michael.

    In: Antimicrobial Agents and Chemotherapy, Vol. 56, No. 5, 2012, p. 2314-2325.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  39. Published

    A polyphasic approach for the characterization of endophytic Alternaria strains isolated from grapevines. / Polizzotto, Rachele; Andersen, Birgitte; Martini, Marta; Grisan, Simone; Assante, Gemma; Musetti, Rita.

    In: Journal of Microbiological Methods, Vol. 88, No. 1, 2012, p. 162-171.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  40. Published

    Applied systems biology - vanillin production in Saccharomyces cerevisiae. / Strucko, Tomas; Eriksen, Carsten; Nielsen, J.; Mortensen, Uffe Hasbro.

    In: The F E B S Journal (Online), Vol. 279, No. Supplement s1, 2012, p. 525-525.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  41. Published

    Aspergillus bertholletius sp. nov. from Brazil Nuts. / Taniwaki, Marta H.; Pitt, John I.; Iamanaka, Beatriz T.; Sartori, Daniele; Copetti, Marina V.; Balajee, Arun; Fungaro, Maria Helena P.; Frisvad, Jens Christian.

    In: P L o S One, Vol. 7, No. 8, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  42. Published
  43. Published

    Atlantinone A, a meroterpenoid produced by Penicillium ribeum and several cheese associated Penicillium species. / Dalsgaard, Petur W.; Petersen, Bent O.; Duus, Jens Ø.; Zidorn, Christian; Frisvad, Jens Christian; Christophersen, Carsten; Larsen, Thomas Ostenfeld.

    In: Metabolites, Vol. 2, 2012, p. 214-220.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  44. Published

    Bioconversion of crude glycerol feedstocks into ethanol by Pachysolen tannophilus. / Liu, Xiaoying; Jensen, Peter Ruhdal; Workman, Mhairi.

    In: Bioresource Technology, Vol. 104, 2012, p. 559-586.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  45. Published
  46. Published
  47. Published

    Chemical and molecular characterization of Phomopsis and Cytospora-like endophytes from different host plants in Brazil. / Abreu, Lucas M.; Costa, Sarah S.; Pfenning, Ludwig H.; Takahashi, Jacqueline A.; Larsen, Thomas Ostenfeld; Andersen, Birgitte.

    In: Fungal Biology, Vol. 116, No. 2, 2012, p. 249-260.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  48. Published

    Children s health and its association with indoor environments in Danish homes and daycare centres – methods. / Clausen, Geo; Høst, A.; Toftum, Jørn; Bekö, Gabriel; Weschler, Charles J.; Callesen, M.; Buhl, S.; Ladegaard, M. B.; Langer, S.; Andersen, Birgitte; Sundell, Jan; Bornehag, Carl-Gustaf; Sigsgaard, T.

    In: Indoor Air, Vol. 22, 2012, p. 467-475.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  49. Published

    Chitin elicitation of natural product production in marine bacteria. / Månsson, Maria; Wietz, Matthias; Larsen, Thomas Ostenfeld; Gram, Lone.

    2012. Abstract from Gordon Conference on Marine Natural Products, Venture, CA, United States.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2012

  50. Published
  51. Published

    Comparison of laser diffraction and image analysis for measurement of Streptomyces coelicolor cell clumps and pellets.. / Rønnest, Nanna Petersen; Stocks, Stuart M; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Biotechnology Letters, Vol. 34, No. 8, 2012, p. 1465-1473.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  52. Published

    Delimitation and characterisation of Talaromyces purpurogenus and related species. / Yilmaz, N.; Houbraken, J.; Hoekstra, E. S.; Frisvad, Jens Christian; Visagie, C. M.; Samson, Ramona.

    In: Persoonia, Vol. 29, 2012, p. 39-54.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  53. Published
  54. Published

    Discovery of novel secondary metabolites in Aspergillus aculeatus. / Petersen, Lene Maj; Holm, Dorte Koefoed; Gotfredsen, Charlotte Held; Larsen, Thomas Ostenfeld.

    In: Planta Medica, Vol. 78, No. 11, 2012, p. 1159-1160.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  55. Published

    Disparate SAR Data of Griseofulvin Analogues for the Dermatophytes Trichophyton mentagrophytes, T. rubrum, and MDA-MB-231 Cancer Cells. / Rønnest, Mads Holger; Raab, Marc S.; Anderhub, Simon; Boesen, Sven; Krämer, Alwin; Larsen, Thomas Ostenfeld; Clausen, Mads Hartvig.

    In: Journal of Medicinal Chemistry, Vol. 55, No. 2, 2012, p. 652-660.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  56. Published

    Draft Genome Sequence of the Yeast Pachysolen tannophilus CBS 4044/NRRL Y-2460. / Liu, Xiaoying ; Kaas, Rolf Sommer; Jensen, Peter Ruhdal; Workman, Mhairi.

    In: Eukaryotic Cell (Online Edition), Vol. 11, No. 6, 2012, p. 827.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  57. Published

    Dynamics in population heterogeneity during batch and continuous fermentation of Saccharomyces cerevisiae. / Heins, Anna-Lena; Lencastre Fernandes, Rita; Lundin, L.; Carlquist, M.; Sörensen, S.; Gernaey, Krist; Eliasson Lantz, Anna.

    In: New Biotechnology, Vol. 29S, 2012, p. S199-S200.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  58. Published
  59. Published

    Rasamsonia, a new genus comprising thermotolerant and thermophilic Talaromyces and Geosmithia species. / Houbraken, J.; Spierenburg, H.; Frisvad, Jens Christian.

    In: Antonie van Leeuwenhoek, Vol. 101, No. 2, 2012, p. 403-421.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  60. Published

    Erratum to “Food fermentations: microorganisms with technological beneficial use” [International Journal of Food Microbiology 154 (2012) 87–97]. / Bourdichon, François; Casaregola, Serge; Farrokh, Choreh; Frisvad, Jens Christian; Gerds, Monica L.; Hammes, Walter P.; Harnett, James; Huys, Geert; Laulund, Svend; Ouwehand, Arthur; Powell, Ian B.; Prajapati, Jashbhai B.; Seto, Yasuyuki; Ter Schure, Eelko; Van Boven, Aart; Vankerckhoven, Vanessa; Zgoda, Annabelle; Tuijtelaars, Sandra; Hansen, Egon Bech.

    In: International Journal of Food Microbiology, Vol. 156, No. 301, 2012.

    Publication: Research - peer-reviewComment/debate – Annual report year: 2012

  61. Published
  62. Published

    Establishing new microbial cell factories for sustainable bioprocesses. / Workman, Mhairi; Holt, Philippe; Liu, Xiaoying .

    In: New Biotechnology, Vol. 29S, 2012, p. S75.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  63. Published
  64. Published

    Experimental poisoning by Baccharis megapotamica var. weirii in buffalo. / Oliveira-Filho, José C.; Carmo, Priscila M.S.; Iversen, Anita; Nielsen, Kristian Fog; Barros, Claudio S. L.

    In: Pesquisa Veterinaria Brasileira, Vol. 32, No. 5, 2012, p. 383-390.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  65. Published

    Food as a Source for Quorum Sensing Inhibitors: Iberin from Horseradish Revealed as a Quorum Sensing Inhibitor of Pseudomonas aeruginosa. / Jakobsen, Tim Holm; Bragason, Steinn Kristinn; Phipps, Richard Kerry; Christensen, Louise Dahl; van Gennip, Maria; Alhede, Morten; Skindersoe, Mette; Larsen, Thomas Ostenfeld; Høiby, Niels; Bjarnsholt, Thomas; Givskov, Michael.

    In: Applied and Environmental Microbiology, Vol. 78, No. 7, 2012, p. 2410-2421.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  66. Published

    Food fermentations: Microorganisms with technological beneficial use. / Bourdichon, François; Casaregola, Serge; Farrokh, Choreh; Frisvad, Jens Christian; Gerds, Monica L.; Hammes, Walter P.; Harnett, James; Huys, Geert; Laulund, Svend; Ouwehand, Arthur; Powell, Ian B.; Prajapati, Jashbhai B.; Seto, Yasuyuki; Ter Schure, Eelko; Van Boven, Aart; Vankerckhoven, Vanessa; Zgoda, Annabelle; Tuijtelaars, Sandra; Hansen, Egon Bech.

    In: International Journal of Food Microbiology, Vol. 154, No. 3, 2012, p. 87-97.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  67. Published

    Fungal natural products targeting chronic lymphocytic leukemia. / Bladt, Tanja Thorskov; Kildgaard, Sara; Knudsen, Peter Boldsen; Gotfredsen, Charlotte Held; Duerr, C.; Seiffert, M.; Larsen, Thomas Ostenfeld.

    In: Planta Medica, Vol. 78, No. 11, 2012, p. 1158-1158.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  68. Published

    Fungal Origins of the Bicyclo[2.2.2]diazaoctane Ring System of Prenylated Indole Alkaloids. / Finefield, Jennifer M.; Frisvad, Jens C.; Sherman, David H.; Williams, Robert M.

    In: Journal of Natural Products, Vol. 75, No. 4, 2012, p. 812-833.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  69. Published
  70. Published
  71. Published

    GF-15, a Novel Inhibitor of Centrosomal Clustering, Suppresses Tumor Cell Growth In Vitro and In Vivo. / Raab, Marc S.; Breitkreutz, Iris; Anderhub, Simon; Rønnest, Mads Holger; Leber, Blanka; Larsen, Thomas Ostenfeld; Weiz, Ludmila; Konotop, Gleb; Hayden, Patrick J.; Podar, Klaus; Fruehauf, Johannes; Nissen, Felix; Mier, Walter; Haberkorn, Uwe; Ho, Anthony D.; Goldschmidt, Hartmut; Anderson, Kenneth C.; Clausen, Mads Hartvig; Krämer, Alwin.

    In: Cancer Research, Vol. 72, No. 20, 2012, p. 5374-5385.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  72. Published

    Heterogeneity in recombinant protein production. / Schalén, Martin; Johanson, Ted; Lundin, Luisa; Sørensen, Søren; Eliasson Lantz, Anna.

    In: New Biotechnology, Vol. 29S, 2012, p. S78.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  73. Published

    Hypopulvins, novel peptaibiotics from the polyporicolous fungus Hypocrea pulvinata, are produced during infection of its natural hosts. / Röhrich, Christian René; Iversen, Anita; Jaklitsch, Walter Michael; Voglmayr, Hermann; Berg, Albrecht; Dörfelt, Heinrich; Thrane, Ulf; Vilcinskas, Andreas; Nielsen, Kristian Fog; von Döhren, Hans; Brückner, Hans; Degenkolb, Thomas.

    In: Fungal Biology, Vol. 116, No. 12, 2012, p. 1219-1231.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  74. Published
  75. Published

    Impact of stoichiometry representation on simulation of genotype-phenotype relationships in metabolic networks.. / Brochado, Ana Rita; Andrejev, Sergej; Maranas, Costas D.; Patil, Kiran R.

    In: P L o S Computational Biology, Vol. 8, No. 11, 2012, p. e1002758.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  76. Published

    Industrial glucoamylase fed‐batch benefits from oxygen limitation and high osmolarity. / Pedersen, Lasse; Hansen, Kim; Nielsen, Jens; Eliasson Lantz, Anna; Thykær, Jette.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 1, 2012, p. 116-124.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  77. Published

    Integrated analytical approaches towards toxic algal natural products discovery. / Larsen, Thomas Ostenfeld; Rasmussen, Silas Anselm; Gedsted Andersen, Mikael; Blossom, Hannah Eva; Christophersen, Carsten; Hansen, Per Juel; Nielsen, Kristian Fog.

    2012. Abstract from 15th International Conference in Harmful Algae, Gyeongnam, Korea, Republic of.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2012

  78. Published
  79. Published
  80. Published

    Linking of Fusarium graminearum PKS3 to bostrycoidin production. / Frandsen, Rasmus John Normand.

    2012. Poster session presented at Cellular & Molecular Fungal Biology, Holderness, NH, United States.

    Publication: Research - peer-reviewPoster – Annual report year: 2012

  81. Published

    Mapping the polysaccharide degradation potential of Aspergillus niger. / Andersen, Mikael Rørdam; Giese, Malene; de Vries, Ronald P.; Nielsen, Jens.

    In: B M C Genomics, Vol. 13, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  82. Published

    Media and growth conditions for induction of secondary metabolite production. / Frisvad, Jens Christian.

    In: Methods in Molecular Biology, Vol. 944, 2012, p. 47-58.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  83. Published

    Microbial production of indolylglucosinolate through engineering of a multi-gene pathway in a versatile yeast expression platform. / Mikkelsen, Michael Dalgaard; Buron, Line Due; Salomonsen, Bo; Olsen, Carl Erik; Hansen, Bjarne Gram; Mortensen, Uffe Hasbro; Halkier, Barbara Ann.

    In: Metabolic Engineering, Vol. 14, No. 2, 2012, p. 104-111.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  84. Published

    New penicillin-producing Penicillium species and an overview of section Chrysogena. / Houbraken, J.; Frisvad, Jens Christian; Seifert, K. A.; Overy, David Patrick; Tuthill, D. M.; Valdez, J. G.; Samson, Ramona.

    In: Persoonia, Vol. 29, 2012, p. 78-100.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  85. Published

    New producers and new 11-, 19-, and 20-residue peptaibiotics: suzukacillins B and C. / Roehrich, C. R.; Iversen, Anita; Degenkolb, T.; Jaklitsch, W. M.; Voglmayr, H.; Thrane, Ulf; Vilcinskas, A.; Nielsen, Kristian Fog; Brueckner, H.

    In: Journal of Peptide Science, Vol. 18, No. S1, 2012, p. S73-S73.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  86. Published

    Nigribactin, a Novel Siderophore from Vibrio nigripulchritudo, Modulates Staphylococcus aureus Virulence Gene Expression. / Nielsen, Anita; Månsson, Maria; Wietz, Matthias; Varming, Anders N.; Phipps, Richard Kerry; Larsen, Thomas Ostenfeld; Gram, Lone; Ingmer, Hanne.

    In: Marine Drugs, Vol. 10, No. 11, 2012, p. 2584-2595.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  87. Published

    Nonribosomal Peptide Synthetase Genes pesL and pes1 Are Essential for Fumigaclavine C Production in Aspergillus fumigatus. / O'Hanlon, Karen A.; Gallagher, Lorna; Schrettl, Markus; Jöchl, Christoph; Kavanagh, Kevin; Larsen, Thomas Ostenfeld; Doyle, Sean.

    In: Applied and Environmental Microbiology, Vol. 78, No. 9, 2012, p. 3166-3176.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  88. Published

    Occurrence of different trichothecenes and deoxynivalenol-3-β-D-glucoside in naturally and artificially contaminated Danish cereal grains and whole maize plants.. / Rasmussen, P. H.; Nielsen, Kristian Fog; Ghorbani, F.; Spliid, Niels Henrik; Nielsen, G. C.; Jørgensen, L. N.

    In: Mycotoxin Research, Vol. 28, No. 3, 2012, p. 181-190.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  89. Published

    One-millilitre microbioreactor with impeller for improved mixing. / Bolic, Andrijana; Krühne, Ulrich; Prior, Rasmus A.; Vilby, Tobias; Hugelier, Siewert; Eliasson Lantz, Anna; Gernaey, Krist.

    2012. Poster session presented at 12th International Conference on Microreaction Technology, Lyon, France.

    Publication: ResearchPoster – Annual report year: 2012

  90. Published

    Patulin and secondary metabolite production by marine-derived Penicillium strains. / Vansteelandt, Marieke; Kerzaon, Isabelle; Blanchet, Elodie; Fossi Tankoua, Olivia; Robiou Du Pont, Thibaut; Joubert, Yolaine; Monteau, Fabrice; Le Bizec, Bruno; Frisvad, Jens C.; Pouchus, Yves François; Grovel, Olivier.

    In: Fungal Biology, Vol. 116, No. 9, 2012, p. 954-961.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  91. Published

    Phaeobacter gallaeciensis Reduces Vibrio anguillarum in Cultures of Microalgae and Rotifers, and Prevents Vibriosis in Cod Larvae. / D'Alvise, Paul; Lillebø, Siril; Prol García, María Jesús; Wergeland, Heidrun I; Nielsen, Kristian Fog; Bergh, Oivind; Gram, Lone.

    In: P L o S One, Vol. 7, No. 8, 2012, p. e43996.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  92. Published

    Physiological characterisation of Yarrowia lipolytica yields new features of the strain. / Holt, Philippe; Thykær, Jette; Workman, Mhairi.

    In: New Biotechnology, Vol. 29S, 2012, p. S212.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  93. Published

    Physiological heterogeneities in microbial populations and implications for physical stress tolerance. / Carlquist, Magnus; Fernandes, Rita Lencastre; Helmark, Søren; Heins, Anna-Lena; Lundin, Luisa; Sorensen, Søren J.; Gernaey, Krist ; Eliasson Lantz, Anna.

    In: Microbial Cell Factories, Vol. 11, No. 94, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  94. Published

    Prediction and identification of sequences coding for orphan enzymes using genomic and metagenomic neighbours. / Yamada, Takuji; Waller, Alison S.; Raes, Jeroen; Zelezniak, Aleksej; Perchat, Nadia; Perret, Alain; Salanoubat, Marcel; Patil, Kiran R.; Weissenbach, Jean; Bork, Peer.

    In: Molecular Systems Biology, Vol. 8, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  95. Published

    Process for the Manufacture of Ajoene Derivatives. / Larsen, Thomas Ostenfeld (Inventor); Givskov, Michael Christian (Inventor); Bjarnsholt, Thomas (Inventor); Jakobsen, Tim Holm (Inventor); Christensen, Louise Dahl (Inventor); Shanmugham, Meenakshi Sundaram (Inventor); Phipps, Richard Kerry (Inventor); Tanner, David Ackland (Inventor); Høiby, Niels (Inventor); Jensen, Peter Østrup (Inventor).

    IPC No.: A61K31/105. Patent No.: WO2012076016. Jun 14, 2012.

    Publication: ResearchPatent – Annual report year: 2012

  96. Published

    Production of Monascus-like pigments. / Frisvad, Jens Christian (Inventor); Meyer, Anne S. (Inventor); Mapari, Sameer Shamsuddin (Inventor); Thrane, Ulf (Inventor).

    IPC No.: A23L1/275. Patent No.: WO2012022765. Feb 23, 2012.

    Publication: ResearchPatent – Annual report year: 2012

  97. Published

    Production of novel fusarielins by ectopic activation of the polyketide synthase 9 cluster in Fusarium graminearum. / Sørensen, Jens Laurids; Hansen, Frederik Teilfeldt; Sondergaard, Teis Esben; Staerk, Dan; Lee, T. Verne; Wimmer, Reinhard; Klitgaard, Louise Graabæk; Purup, Stig; Giese, Henriette; Frandsen, Rasmus John Normand.

    In: Environmental Microbiology, Vol. 14, No. 5, 2012, p. 1159-1170.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  98. Published

    Quick guide to polyketide synthase and nonribosomal synthetase genes in Fusarium. / Hansen, Jørgen T.; Sørensen, Jens L.; Giese, Henriette; Sondergaard, Teis E.; Frandsen, Rasmus J.N.

    In: International Journal of Food Microbiology, Vol. 155, No. 3, 2012, p. 128-136.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  99. Published
  100. Published

    Redirection of pigment biosynthesis to isocoumarins in Fusarium. / Sørensen, Jens Laurids; Nielsen, Kristian Fog; Sondergaard, Teis Esben.

    In: Fungal Genetics and Biology, Vol. 49, No. 8, 2012, p. 613-618.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  101. Published

    Regulatory processes in Aspergillus niger. / Poulsen, Lars; Thykær, Jette (Supervisor); Eliasson Lantz, Anna (Supervisor).

    Department of Systems Biology, DTU, 2012. 271 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2012

  102. Published

    Robust, small-scale cultivation platform for Streptomyces coelicolor. / Sohoni, Sujata Vijay; Bapat, Prashant Madhusudan; Lantz, Anna Eliasson.

    In: Microbial Cell Factories, Vol. 11, No. 1, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  103. Published

    Screening of Aspergillus nidulans metabolites from habitat mimicking media using LC-DAD-TOFMS system. / Klitgaard, Andreas; Holm, Dorte Koefoed; Frisvad, Jens Christian; Nielsen, Kristian Fog.

    In: Planta Medica, Vol. 78, No. P167, 2012.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

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