Center for Biological Sequence Analysis

  1. 2008
  2. Published

    The genome BLASTatlas - a GeneWiz extension for visualization of whole-genome homology. / Hallin, Peter Fischer; Binnewies, Tim Terence; Ussery, David.

    In: Molecular BioSystems, Vol. 4, No. 5, 2008, p. 363-371.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  3. Published

    The genome of the versatile nitrogen fixer Azorhizobium caulinodans ORS571. / Lee, KB; De Backer, P; Aono, T; Liu, CT; Suzuki, S; Suzuki, T; Kaneko, T; Yamada, M; Tabata, S; Kupfer, DM; Najar, FZ; Wiley, GB; Roe, B; Binnewies, Tim Terence; Ussery, David; D'Haeze, WD; Herder, JD; Gevers, D; Vereecke, D; Holsters, M; Oyaizu, H.

    In: BMC Genomics, Vol. 9, 2008, p. 271.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  4. Published

    The minimum information about a genome sequence (MIGS) specification. / Field, D; Garrity, G; Gray, T; Morrison, N; Selengut, J; Sterk, P; Tatusova, T; Thomson, N; Allen, MJ; Angiuolii, SV; Ashburner, M; Axelrod, N; Baldauf, S; Boore, SBJ; Cochrane, G; Cole, J; Dawyndt, P; Vos, PD; dePamphilis, C; Edwards, R; Faruque, N; Feldman, R; Gilbert, J; Gilna, P; Glöckner, FO; Goldstein, P; Guralnick, R; Haft, D; Hancock, D; Hermjakob, H; Hertz-Fowler, C; Hugenholtz, P; Joint, I; Kagan, L; Kane, M; Kennedy, J; Kowalchuk, G; Kottman, R; Kolker, E; Kravitz, S; Kyrpides, N; Leebens-Mack, J; Lewis, SE; Li, K; Lister, A; Lord, P; Maltsev, N; Markowitz, V; Martiny, J; Methe, B; Moxon, R; K, Nelson; Parkhill, J; Proctor, L; Sansone, SA; Spiers, A; Stevens, R; Swift, P; Taylor, C; Tateno, Y; Tett, A; Turner, S; Ussery, David; Vaughan, B; Ward, B; Whetzel, T; Wilson, G; Wipat, A.

    In: Nature Biotechnology, Vol. 26, No. 5, 2008, p. 541-547.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  5. Published

    The peptide-binding specificity of HLA-A*3001 demonstrates membership of the HLA-A3 supertype. / Lamberth, K; Røder, G; Harndahl, M; Nielsen, Morten; Lundegaard, Claus; Schafer-Nielsen, C; Lund, Ole; Buus, Søren.

    In: Immunogenetics, Vol. 60, No. 11, 2008, p. 633-643.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  6. Published
  7. Published

    Toward a Standards-Compliant Genomic and Metagenomic Publication Record. / Garrity, GM; Field, D; Kyrpides, N; Hirschman, L; Sansone, SA; Angiuoli, S; Cole, JR; Glöckner, FO; Kolker, E; Kowalchuk, G; Moran, MA; Ussery, David; White, O.

    In: OMICS: A Journal of Integrative Biology, Vol. 12, No. 2, 2008, p. 157-160.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  8. Published
  9. Published

    Transcriptomics and adaptive genomics of the asymptomatic bacteriuria Escherichia coli strain 83972. / Hancock, Viktoria; Seshasayee, Aswin S.; Ussery, David; Luscombe, Nicholas M.; Klemm, Per.

    In: Molecular Genetics and Genomics, Vol. 279, No. 5, 2008, p. 523-534.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  10. Published

    Upregulation of the miR-515 cluster in the MCF7 breast cancer cell line by epigenetic therapy. / Hother, C.; Cortez, C.; Miranda, T.; Yoo, C.; Workman, Christopher; Jones, P.A.; Gronbak, K.

    In: Apmis, Vol. 116, No. 5, 2008, p. 437-437.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2008

  11. Published

    Viral bioinformatics. / Adams, B.; Carolyn McHardy, A.; Lundegaard, Claus; Lengauer, T.

    Modern Genome Annotation: The Biosapiens Network. Vol. Chapter 8.1 Springer, 2008. p. 429-450.

    Publication: Research - peer-reviewBook chapter – Annual report year: 2008

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