Center for Biological Sequence Analysis

  1. 2012
  2. Published

    Partial migration in fishes: definitions, methodologies and taxonomic distribution. / Chapman, B B; Skov, C; Hulthén, K; Brodersen, Jacob; Nilsson, P A; Hansson, L-A; Brönmark, C.

    In: Journal of Fish Biology, Vol. 81, No. 2, 2012, p. 479-499.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  3. Published

    Peptide‐MHC class I stability is a better predictor than peptide affinity of CTL immunogenicity. / Harndahl, Mikkel Nors; Rasmussen, Michael; Roder, Gustav; Dalgaard Pedersen, Ida; Sørensen, Mikael; Nielsen, Morten; Buus, Søren.

    In: European Journal of Immunology, Vol. 42, No. 6, 2012, p. 1405-1416.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  4. Published

    Peptide-MHC class I stability is a stronger predictor of CTL immunogenicity than peptide affinity. / Harndahl, Mikkel Nors; Rasmussen, Michael; Nielsen, Morten; Buus, Soren.

    Molecular Immunology. Vol. 51 Elsevier, 2012. p. 11.

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2012

  5. Published

    Plasmodium falciparum erythrocyte membrane protein 1 domain cassettes 8 and 13 are associated with severe malaria in children. / Lavstsen, Thomas; Turner, Louise; Saguti, Fredy; Magistrado, Pamela Almeida; Rask, Thomas Salhøj; Jespersen, Jakob S.; Wang, Christian W.; Berger, Sanne Schou; Baraka, Vito; Marquard, Andrea M.; Seguin-Orlando, Andaine; Willerslev, Eske; Gilbert, Marcus Thomas Pius; Lusingu, John Peter Andrea; Theander, Thor Grundtvig.

    In: National Academy of Sciences. Proceedings, Vol. 109, No. 26, 2012, p. E1791-E1800.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  6. Published

    Polyclonality of Concurrent Natural Populations of Alteromonas macleodii. / Gonzaga, Aitor; Martin-Cuadrado, Ana-Belen; López-Pérez, Mario; Megumi Mizuno, Carolina; García-Heredia, Inmaculada; Kimes, Nikole E.; Lopez-García, Purificación; Moreira, David; Ussery, David; Zaballos, Mila; Ghai, Rohit; Rodriguez-Valera, Francisco.

    In: Genome Biology and Evolution, Vol. 4, No. 12, 2012, p. 201360-1374.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  7. Published
  8. Published

    Predictions versus high-throughput experiments in T-cell epitope discovery: competition or synergy? / Lundegaard, Claus; Lund, Ole; Nielsen, Morten.

    In: Expert Review of Vaccines, Vol. 11, No. 1, 2012, p. 43.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  9. Published

    Profiles of Genomic Instability in High-Grade Serous Ovarian Cancer Predict Treatment Outcome. / Wang, Zhigang C.; Birkbak, Nicolai Juul; Culhane, Aedín C.; Drapkin, Ronny; Fatima, Aquila; Tian, Ruiyang; Schwede, Matthew; Alsop, Kathryn; Daniels, Kathryn E.; Piao, Huiying; Liu, Joyce; Etemadmoghadam, Dariush; Miron, Alexander; Salvesen, Helga B.; Mitchell, Gillian; DeFazio, Anna; Quackenbush, John; Berkowitz, Ross S.; Iglehart, J. Dirk; Bowtell, David D.L.; Matulonis, Ursula A.

    In: Clinical Cancer Research, Vol. 18, No. 20, 2012, p. 5806-5815.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  10. Published
  11. Published

    Recommendations for Mass Spectrometry Data Quality Metrics for Open Access Data (Corollary to the Amsterdam Principles). / Kinsinger, Christopher R.; Apffel, James; Baker, Mark; Bian, Xiaopeng; Borchers, Christoph H.; Bradshaw, Ralph; Brusniak, Mi-Youn; Chan, Daniel W.; Deutsch, Eric W.; Domon, Bruno; Gorman, Jeff; Grimm, Rudolf; Hancock, William; Hermjakob, Henning; Horn, David; Hunter, Christie; Kolar, Patrik; Kraus, Hans-Joachim; Langen, Hanno; Linding, Rune; Moritz, Robert L.; Omenn, Gilbert S.; Orlando, Ron; Pandey, Akhilesh; Ping, Peipei; Rahbar, Amir; Rivers, Robert; Seymour, Sean L.; Simpson, Richard J.; Slotta, Douglas; Smith, Richard D.; Stein, Stephen E.; Tabb, David L.; Tagle, Danilo; Yates, John R., III; Rodriguez, Henry.

    In: Proteomics, Vol. 12, No. 1, 2012, p. 11-20.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

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