Center for Biological Sequence Analysis

  1. 2011
  2. Published

    Metatranscriptomics of the human gut microbiome. / Sicheritz-Pontén, Thomas (Invited author).

    In: Genome Biology (Online Edition), Vol. 12 Suppl 1, 2011, p. I15.

    Publication: ResearchConference abstract in journal – Annual report year: 2011

  3. Published

    Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene. / Bowman, Jeff S.; Rasmussen, Simon; Blom, Nikolaj; Deming, Jody W; Rysgaard, Søren; Sicheritz-Pontén, Thomas.

    In: I S M E Journal, 2011, p. 1-10.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  4. Published

    MicroRNA-130a–mediated down-regulation of Smad4 contributes to reduced sensitivity to TGF-β1 stimulation in granulocytic precursors. / Häger, Mattias; Pedersen, Corinna Cavan; Larsen, Maria Torp; Andersen, Mette Klarskov; Hother, Christoffer; Grønbæk, Kirsten; Jarmer, Hanne Østergaard; Borregaard, Niels; Cowland, Jack Bernard.

    In: Blood, Vol. 118, No. 25, 2011, p. 6649-6659.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  5. Published

    Mir-130a-Mediated Downregulation of SMAD4 Contributes to Reduced Sensitivity to TGE beta Stimulation in Promyelocytic Cells. / Hager, Mattias; Pedersen, Corinna Cavan; Larsen, Maria Torp; Andersen, Mette Klarskov; Hother, Christoffer; Gronbaek, Kirsten; Jarmer, Hanne; Borregaard, Niels; Cowland, Jack B.

    In: Blood, Vol. 118, No. 21, 2011, p. 1450-1451.

    Publication: Research - peer-reviewConference abstract in journal – Annual report year: 2012

  6. Published

    MULTIPRED2: A computational system for large-scale identification of peptides predicted to bind to HLA supertypes and alleles. / Zhang, Guang Lan; DeLuca, David S.; Keskin, Derin B.; Chitkushev, Lou; Zlateva, Tanya; Lund, Ole; Reinherz, Ellis L.; Brusic, Vladimir.

    In: Journal of Immunological Methods, Vol. 374, No. 1-2, 2011, p. 53-61.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  7. Published

    Mycobacterial species as case-study of comparative genome analysis. / Zakham, F.; Belayachi, L.; Ussery, David; Akrim, M.; Benjouad, A.; El Aouad, R.; Ennaji, M. M.

    In: Cellular and Molecular Biology, Vol. 57, 2011, p. 1462-1469.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  8. Published

    Natural genetic engineering: intelligence & design in evolution? / Ussery, David.

    In: Microbial Informatics and Experimentation, Vol. 1, No. 11, 2011.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  9. Published

    Next-generation QSAR. / Oprea, Tudor.

    In: Molecular Informatics, Vol. 30, No. 2-3, 2011, p. 89.

    Publication: Research - peer-reviewEditorial – Annual report year: 2011

  10. Published

    NNAlign: A Web-Based Prediction Method Allowing Non-Expert End-User Discovery of Sequence Motifs in Quantitative Peptide Data. / Andreatta, Massimo; Schafer-Nielsen, Claus; Lund, Ole; Buus, Søren; Nielsen, Morten.

    In: P L o S One, Vol. 6, No. 11, 2011, p. e26781.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  11. Published

    OpenFreezer: a reagent information management software system. / Olhovsky, Marina; Williton, Kelly; Dai, Anna Yue; Pasculescu, Adrian; Lee, John Paul; Goudreault, Marilyn; Wells, Clark D; Park, Jin Gyoon; Gingras, Anne-Claude; Linding, Rune; Pawson, Tony; Colwill, Karen.

    In: Nature Methods, Vol. 8, No. 8, 2011, p. 612-613.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

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