Center for Biological Sequence Analysis

  1. 2016
  2. Published

    MECP2 Is a Frequently Amplified Oncogene with a Novel Epigenetic Mechanism That Mimics the Role of Activated RAS in Malignancy. / Neupane, Manish; Clark, Allison P.; Landini, Serena; Birkbak, Nicolai Juul; Eklund, Aron Charles; Lim, Elgene; Culhane, Aedin C.; Barry, William T.; Schumacher, Steven E.; Beroukhim, Rameen; Szallasi, Zoltan Imre; Vidal, Marc; Hill, David E.; Silver, Daniel P.

    In: Cancer Discovery, Vol. 6, No. 1, 2016, p. 45-58.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  3. Published

    Meta-analysis of proportion estimates of Extended-Spectrum-Beta-Lactamase-producing Enterobacteriaceae in East Africa hospitals. / Sonda, Tolbert; Kumburu, Happiness; van Zwetselaar, Marco; Alifrangis, Michael; Lund, Ole; Kibiki, Gibson; Aarestrup, Frank Møller.

    In: Antimicrobial Resistance and Infection Control, Vol. 5, 18, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  4. E-pub ahead of print
  5. Published

    MicroRNA 486-3P as a stability marker in acute coronary syndrome. / Wei, Tianling; Folkersen, Lasse; Ehrenborg, Ewa; Gabrielsen, Anders.

    In: Bioscience Reports, Vol. 36, No. 3, e00351, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  6. E-pub ahead of print

    Model studies of lipid flip-flop in membranes. / Parisio, Giulia; Ferrarini, Alberta; Sperotto, Maria Maddalena.

    In: International Journal of Advances in Engineering Sciences and Applied Mathematics, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  7. Published

    Molecular characterization of atopic dermatitis : a meta-analysis. / Ewald, David Adrian; Workman, Christopher (Main supervisor); Suárez-Fariñas, Mayte (Supervisor); Guttman-Yassky, Emma (Supervisor); Litman, Thomas (Supervisor).

    Kgs. Lyngby : Department of Systems Biology, DTU, 2016. 143 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2016

  8. Published

    Molecular characterization of irinotecan (SN-38) resistant human breast cancer cell lines. / Jandu, Haatisha; Aluzaite, Kristina; Fogh, Louise; Thrane, Sebastian Wingaard; Noer, Julie B.; Proszek, Joanna; Nguyen Do, Khoa; Hansen, Stine Ninel; Damsgaard, Britt; Nielsen, Signe Lykke; Stougaard, Magnus; Knudsen, Birgitta R.; Moreira, Jose; Hamerlik, Petra; Gajjar, Madhavsai; Smid, Marcel; Martens, John; Foekens, John; Pommier, Yves; Brunner, Nils; Schrohl, Anne-Sofie; Stenvang, Jan.

    In: B M C Cancer, Vol. 16, No. 1, 34, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  9. Published

    Molecular markers for tracking the origin and worldwide distribution of invasive strains of Puccinia striiformis. / Walter, Stephanie; Ali, Sajid; Kemen, Eric; Nazari, Kumarse; Bahri, Bochra A.; Enjalbert, Jérôme; Hansen, Jens G.; Brown, James K.M.; Sicheritz-Pontén, Thomas; Jones, Jonathan; de Vallavieille-Pope, Claude; Hovmøller, Mogens S.; Justesen, Annemarie Fejer.

    In: Ecology and Evolution, Vol. 6, No. 9, 2016, p. 2790-2804.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  10. Published

    Neil3-dependent base excision repair regulates lipid metabolism and prevents atherosclerosis in Apoe-deficient mice. / Skarpengland, Tonje; Holm, Sverre; Scheffler, Katja; Gregersen, Ida; Dahl, Tuva B.; Suganthan, Rajikala; Segers, Filip M.; Østlie, Ingunn; Otten, Jeroen J. T.; Luna, Luisa; Ketelhuth, Daniel F. J.; Lundberg, Anna M.; Neurauter, Christine G.; Hildrestrand, Gunn; Skjelland, Mona; Bjørndal, Bodil; Svardal, Asbjørn M.; Iversen, Per O.; Hedin, Ulf; Nygård, Ståle; Olstad, Ole K.; Krohg-Sorensen, Kirsten; Slupphaug, Geir; Eide, Lars; Kusnierczyk, Anna; Folkersen, Lasse; Ueland, Thor; Berge, Rolf K.; Hansson, Göran K.; Biessen, Erik A. L.; Halvorsen, Bente; Bjørås, Magnar; Aukrust, Pål.

    In: Scientific Reports, Vol. 6, 28337, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  11. Published

    NetMHCpan-3.0; improved prediction of binding to MHC class I molecules integrating information from multiple receptor and peptide length datasets. / Nielsen, Morten; Andreatta, Massimo.

    In: Genome Medicine, Vol. 8, No. 1, 33, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

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