Center for Biological Sequence Analysis

  1. 2015
  2. Published

    Identification of possible adverse drug reactions in clinical notes : The case of glucose-lowering medicines. / Warrer, Pernille; Jensen, Peter Bjødstrup; Aagaard, Lise; Jensen, Lars Juhl; Brunak, Søren; Krag, Malene Hammer; Rossing, Peter; Almdal, Thomas; Andersen, Henrik Ullits; Hansen, Ebba Holme.

    In: Journal of Research in Pharmacy Practice, Vol. 4, No. 2, 2015, p. 64-72.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  3. Published

    Identifying transcripts associated with aggressiveness in wheat yellow rust by transcriptomic sequencing. / Chen, Yan-Jun; Vogt, Josef Korbinian; Sørensen, Chris Khadgi; Rodriguez-Algaba, Julian; Sicheritz-Pontén, Thomas; Hovmøller, Mogens S.; Justesen, Annemarie Fejer.

    Abstracts : 14th International Cereal Rusts and Powdery Mildews Conference 2015. 2015. p. 106-106 (ARO Abstracts).

    Publication: Research - peer-reviewConference abstract in proceedings – Annual report year: 2015

  4. Published

    Individualization of treatments with drugs metabolized by CES1 : combining genetics and metabolomics. / Rasmussen, Henrik B.; Bjerre, Ditte; Linnet, Kristian; Juergens, Gesche; Dalhoff, Kim; Stefansson, Hreinn; Hankemeier, Thomas; Kaddurah-Daouk, Rima; Taboureau, Olivier ; Brunak, Søren; Houmann, Tine; Jeppesen, Pia; Pagsberg, Anne Katrine; Plessen, Kerstin; Dyrborg, Jorgen; Hansen, Peter R.; Hansen, Poul Erik; Hughes, Tim; Werge, Thomas.

    In: Pharmacogenomics, Vol. 16, No. 6, 2015, p. 649-665.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  5. Published

    Inherited coding variants at the CDKN2A locus influence susceptibility to acute lymphoblastic leukaemia in children. / Xu, Heng; Zhang, Hui; Yang, Wenjian; Yadav, Rachita; Morrison, Alanna C.; Qian, Maoxiang; Devidas, Meenakshi; Liu, Yu; Perez-Andreu, Virginia; Zhao, Xujie; Hansen, Torben; Holm, Jens-Christian; Gupta, Ramneek.

    In: Nature Communications, Vol. 6, 7553, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  6. Published

    Insights from 20 years of bacterial genome sequencing. / Land, Miriam; Hauser, Loren; Jun, Se-Ran; Nookaew, Intawat; Leuze, Michael R.; Ahn, Tae-Hyuk; Karpinets, Tatiana; Lund, Ole; Kora, Guruprased; Wassenaar, Trudy; Poudel, Suresh; Ussery, David.

    In: Functional & Integrative Genomics, Vol. 15, No. 2, 2015, p. 141-161.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  7. Published

    Integrative analysis of kinase networks in TRAIL-induced apoptosis provides a source of potential targets for combination therapy. / So, Jonathan; Pasculescu, Adrian; Dai, Anna Y.; Williton, Kelly; James, Andrew; Nguyen, Vivian; Creixell, Pau; Schoof, Erwin M.; Sinclair, John; Barrios-Rodiles, Miriam; Gu, Jun; Krizus, Aldis; Williams, Ryan; Olhovsky, Marina; Dennis, James W.; Wrana, Jeffrey L.; Linding, Rune; Jørgensen, Claus; Pawson, Tony; Colwill, Karen.

    In: Science Signaling, Vol. 8, No. 371, rs3, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  8. Published

    Investigation of Human Cancers for Retrovirus by Low-Stringency Target Enrichment and High-Throughput Sequencing. / Vinner, Lasse ; Mourier, Tobias ; Friis-Nielsen, Jens; Gniadecki, Robert; Dybkaer, Karen; Rosenberg, Jacob; Levin Langhof, Jill; Flores Santa Cruz, David; Fonager, Jannik; Gonzalez-Izarzugaza, Jose Maria; Gupta, Ramneek; Sicheritz-Pontén, Thomas; Brunak, Søren; Willerslev, Eske; Nielsen, Lars Peter; Hansen, Anders Johannes .

    In: Scientific Reports, Vol. 5, 13201, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  9. Published

    Lactococcus lactis Thioredoxin Reductase Is Sensitive to Light Inactivation. / Björnberg, Olof; Viennet, Thibault; Skjoldager, Nicklas; Curovic, Aida; Nielsen, Kristian Fog; Svensson, Birte; Hagglund, P.

    In: Biochemistry, Vol. 54, No. 8, 2015, p. 1628-1637.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  10. E-pub ahead of print
  11. Published

    LYRA, a webserver for lymphocyte receptor structural modeling.. / Schantz Klausen, Michael; Anderson, Mads Valdemar; Jespersen, Martin Closter; Nielsen, Morten; Marcatili, Paolo.

    In: Nucleic Acids Research, Vol. 43, No. W1, 2015, p. W349-W355.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

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