Center for Biological Sequence Analysis

  1. 2017
  2. Published

    Obesity is associated with depot-specific alterations in adipocyte DNA methylation and gene expression. / Sonne, Si Brask; Yadav, Rachita; Yin, Guangliang; Dalgaard, Marlene Danner; Myrmel, Lene Secher; Gupta, Ramneek; Wang, Jun; Madsen, Lise; Kajimura, Shingo; Kristiansen, Karsten.

    In: Adipocyte (Philadelphia), Vol. 6, No. 2, 2017, p. 124-133.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  3. Published

    Oscillospira and related bacteria - from metagenomics species to metabolic features. / Gophna, Uri; Konikoff, Tom; Nielsen, Henrik Bjørn.

    In: Environmental Microbiology, Vol. 19, No. 3, 2017, p. 835-841.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  4. Published

    PanViz: interactive visualization of the structure of functionally annotated pangenomes. / Pedersen, Thomas Lin; Nookaew, Intawat; Wayne Ussery, David; Månsson, Maria.

    In: Bioinformatics, Vol. 33, No. 7, btw761, 2017, p. 1081-1082.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  5. Published

    Phase behavior of supported lipid bilayers: A systematic study by coarse-grained molecular dynamics simulations. / Poursoroush, Asma; Sperotto, Maria Maddalena; Laradji, Mohamed.

    In: Journal of Chemical Physics, Vol. 146, No. 15, 154902, 2017.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  6. Published
  7. Published

    Positive diversifying selection is a pervasive adaptive force throughout the Drosophila radiation. / Cicconardi, Francesco; Marcatili, Paolo; Arthofer, Wolfgang; Schlick-Steiner, Birgit C; Steiner, Florian M.

    In: Molecular Phylogenetics and Evolution, Vol. 112, 2017, p. 230-243.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  8. Published

    Proteomic approaches for quantitative cancer cell signaling. / Voellmy, Franziska; Sommer, Morten Otto Alexander (Main supervisor); Linding, Rune (Supervisor).

    Kgs. Lyngby : Novo Nordisk Foundation Center for Biosustainability, 2017. 150 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2018

  9. Published

    Quantification of within-sample genetic heterogeneity from SNP-array data. / Martinez, Pierre; Kimberley, Christopher; Birkbak, Nicolai Juul; Marquard, Andrea Marion; Szallasi, Zoltan Imre; A. Graham, Trevor.

    In: Scientific Reports, Vol. 7, 3248, 2017.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  10. Published

    Sequencing and de novo assembly of 150 genomes from Denmark as a population reference. / Maretty, Lasse; Jensen, Jacob Malte; Petersen, Bent; Sibbesen, Jonas Andreas; Liu, Siyang; Villesen, Palle ; Skov, Laurits; Belling, Kirstine González-Izarzugaza; Theil Have, Christian; Gonzalez-Izarzugaza, Jose Maria; Grosjean, Marie; Bork-Jensen, Jette; Grove, Jakob; Als, Thomas D.; Huang, Shujia; Chang, Yuqi; Xu, Ruiqi; Ye, Weijian ; Rao, Junhua ; Guo, Xiaosen; Sun, Jihua; Cao, Hongzhi; Ye, Chen; van Beusekom, Johan; Espeseth, Thomas; Flindt, Esben N.; Friborg, Rune M. ; Halager, Anders E.; Le Hellard, Stephanie; Hultman, Christina M.; Lescai, Francesco; Li, Shengting; Lund, Ole; Løngreen, Peter; Mailund, Thomas; Matey-Hernandez, María Luisa; Mors, Ole; Pedersen, Christian N. S.; Sicheritz-Pontén, Thomas; Sullivan, Patrick F.; Syed, Ali; Westergaard, David ; Yadav, Rachita; Li, Ning; Xu, Xun; Hansen, Torben; Krogh, Anders; Bolund, Lars; Sørensen, Thorkild I. A.; Pedersen, Oluf; Gupta, Ramneek; Rasmussen, Simon; Besenbacher, Søren; Börglum, Anders D.; Wang, Jun; Eiberg, Hans; Kristiansen, Karsten; Brunak, Søren; Schierup, Mikkel Heide.

    In: Nature, Vol. 548, 2017, p. 87-91.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  11. Published

    Spontaneous Lipid Flip-Flop in Membranes: A Still Unsettled Picture from Experiments and Simulations. / Sperotto, Maria Maddalena; Ferrarini, Alberta.

    The Biophysics of Cell Membranes: Biological Consequences. ed. / Richard M. Epand; Jean-Marie Ruysschaert. Vol. 19 Springer, 2017. p. 29-60 (Springer Series in Biophysics, Vol. 19).

    Publication: Research - peer-reviewBook chapter – Annual report year: 2017

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