Center for Biological Sequence Analysis

  1. 2016
  2. Published

    A genomic history of Aboriginal Australia. / Malaspinas, Anna-Sapfo; Westaway, Michael C.; Muller, Craig; Sousa, Vitor C.; Lao, Oscar; Alves, Isabel; Bergström, Anders; Athanasiadis, Georgios; Cheng, Jade Y.; Crawford, Jacob E.; Rasmussen, Simon; Albrechtsen, Anders; Margaryan, Ashot; Moltke, Ida; Korneliussen, Thorfinn S.; Moreno-Mayar, J. Víctor; Sikora, Martin; Brunak, Søren; Campos, Paula F.; Schierup, Mikkel H.; Foley, Robert A.; Lahr, Marta Mirazón; Mailund, Thomas; Nielsen, Rasmus; Willerslev, Eske.

    In: Nature, Vol. 538, No. 7624, 2016, p. 207-214.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  3. Published

    A Drosophila Genome-Wide Screen Identifies Regulators of Steroid Hormone Production and Developmental Timing. / Thomas Danielsen, E.; E. Møller, Morten; Yamanaka, Naoki; Ou, Qiuxiang; Laursen, Janne Marie; Soenderholm, Cæcilie; Zhuo, Ran; Phelps, Brian; Tang, Kevin; Zeng, Jie; Kondo, Shu; H. Nielsen, Christian; Harvald, Eva B.; Faergeman, Nils J.; J. Haley, Macy; A. O'Connor, Kyle; King-Jones, Kirst; B. O'Connor, Michael; F. Rewitz, Kim.

    In: Developmental Cell, Vol. 37, No. 6, 2016, p. 558-570.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  4. Published

    Alpha proteobacterial ancestry of the [Fe-Fe]-hydrogenases in anaerobic eukaryotes. / Degli Esposti, Mauro; Cortez, Diego; Lozano, Luis; Rasmussen, Simon; Nielsen, Henrik Bjørn; Martinez Romero, Esperanza.

    In: Biology Direct, Vol. 11, 34, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  5. Published

    Angiotensinogen and HLA class II predict bevacizumab response in recurrent glioblastoma patients. / Urup, Thomas; Michaelsen, Signe Regner; Olsen, Lars Rønn; Toft, Anders; Christensen, Ib Jarle; Grunnet, Kirsten; Winther, Ole; Broholm, Helle; Kosteljanetz, Michael; Issazadeh-Navikas, Shohreh; Poulsen, Hans Skovgaard; Lassen, Ulrik.

    In: Molecular Oncology, Vol. 10, No. 8, 2016, p. 1160-1168.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  6. Published
  7. Published

    Application of WGS data for O-specific antigen analysis and in silico serotyping of Pseudomonas aeruginosa isolates. / Thrane, Sandra Wingaard; Taylor, Véronique L.; Lund, Ole; Lam, Joseph S.; Jelsbak, Lars.

    In: Journal of Clinical Microbiology, Vol. 54, No. 7, 2016, p. 1782-1788.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  8. Published

    A robust prognostic gene expression signature for early stage lung adenocarcinoma. / Krzystanek, Marcin; Moldvay, Judit; Szüts, David; Szallasi, Zoltan Imre; Eklund, Aron Charles.

    In: Biomarker Research, Vol. 4, No. 4, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  9. Published

    Asparaginase-associated pancreatitis: a study on phenotype and genotype in the NOPHO ALL2008 protocol. / Wolthers, B. O.; Frandsen, Thomas L.; Abrahamsson, Jonas; Albertsen, B. K.; Helt, L. R.; Heyman, Mats; Jonsson, Olafur G.; Korgvee, L. T.; Lund, B.; Raja, R. A.; Rasmussen, K. K.; Taskinen, M.; Tulstrup, M.; Vaitkeviciene, G. E.; Yadav, Rachita; Gupta, R.; Schmiegelow, K.

    In: Leukemia, Vol. 31, No. 2, 2016, p. 325-332.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  10. Published

    Automated Clustering Analysis of Immunoglobulin Sequences in Chronic Lymphocytic Leukemia Based on 3D Structural Descriptors. / Marcatili, Paolo; Mochament, Konstantinos; Agathangelidis, Andreas; Moschonas, Panagiotis; Sutton, Lesley-Ann; Yan, Xiao-Jie; Bikos, Vasilis; Vardi, Anna; Chailyan, Anna ; Stavroyianni, Niki ; Jensen, Kamilla Kjærgaard; Anagnostopoulos, Achilles; Chiorazzi, Nicholas; Belessi, Chrysoula ; Rosenquist, Richard; Ghia, Paolo ; Stamatopoulos, Kostas ; Hadzidimitriou, Anastasia ; Tzovaras, Dimitrios .

    In: Blood, Vol. 128, No. 22, 2016, p. 4365.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  11. Published

    BCL9L Dysfunction Impairs Caspase-2 Expression Permitting Aneuploidy Tolerance in Colorectal Cancer. / López-García, Carlos; Sansregret, Laurent; Domingo, Enric; McGranahan, Nicholas; Hobor, Sebastijan; Birkbak, Nicolai Juul; Horswell, Stuart; Grönroos, Eva; Favero, Francesco; Rowan, Andrew J.; Matthews, Nicholas; Begum, Sharmin; Phillimore, Benjamin; Burrell, Rebecca; Oukrif, Dahmane; Spencer-Dene, Bradley; Kovac, Michal; Stamp, Gordon; Stewart, Aengus; Danielsen, Havard; Novelli, Marco; Tomlinson, Ian; Swanton, Charles.

    In: Cancer Cell, Vol. 31, No. 1, 2016, p. 79-93.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

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