Center for Biological Sequence Analysis

  1. 2017
  2. Published

    Chromosome-wise Protein Interaction Patterns and Their Impact on Functional Implications of Large-Scale Genomic Aberrations. / Kirk, Isa Kristina; Weinhold, Nils; Belling, Kirstine González-Izarzugaza; Skakkebæk, Niels Erik; Jensen, Thomas Skøt; Leffers, Henrik; Juul, Anders ; Brunak, Søren.

    In: Cell Systems, Vol. 4, No. 3, 2017, p. 357-364.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  3. Published

    Combined immunodeficiency and Epstein-Barr virus-induced B cell malignancy in humans with inherited CD70 deficiency. / Abolhassani, Hassan; Edwards, Emily S. J.; Ikinciogullari, Aydan; Jing, Huie; Borte, Stephan; Buggert, Marcus; Du, Likun; Matsuda-Lennikov, Mami; Romano, Rosa; Caridha, Rozina; Bade, Sangeeta; Zhang, Yu; Frederiksen, Juliet Wairimu; Fang, Mingyan; Bal, Sevgi Kostel; Haskologlu, Sule; Dogu, Figen; Tacyildiz, Nurdan; Matthews, Helen F.; McElwee, Joshua J; Gostick, Emma; Price, David A.; Palendira, Umaimainthan; Aghamohammadi, Asghar; Boisson, Bertrand; Rezaei, Nima; Karlsson, Annika C; Lenardo, Michael J.; Casanova, Jean-Laurent; Hammarström, Lennart; Tangye, Stuart G.; Su, Helen C; Pan-Hammarström, Qiang.

    In: The Journal of Experimental Medicine, Vol. 214, No. 1, 2017, p. 91-106.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  4. Published

    Contribution of copy number variants to schizophrenia from a genome-wide study of 41,321 subjects. / Marshall, Christian R.; Howrigan, Daniel P.; Merico, Daniele; Thiruvahindrapuram, Bhooma; Wu, Wenting; Greer, Douglas S.; Antaki, Danny; Shetty, Aniket; Holmans, Peter A.; Pinto, Dalila; Gujral, Madhusudan; Brandler, William M.; Malhotra, Dheeraj; Wang, Zhouzhi; Fuentes Fajarado, Karin V.; Maile, Michelle S.; Ripke, Stephan; Agartz, Ingrid; Albus, Margot; Alexander, Madeline; Amin, Farooq; Atkins, Joshua; Bacanu, Silviu A.; Belliveau, Richard A.; Bergen, Sarah E.; Bertalan, Marcelo; Bevilacqua, Elizabeth; Bigdeli, Tim B.; Black, Donald W.; Bruggeman, Richard; Buccola, Nancy G.; Buckner, Randy L.; Bulik-Sullivan, Brendan; Byerley, William; Cahn, Wiepke; Cai, Guiqing; Cairns, Murray J.; Campion, Dominique; Cantor, Rita M.; Carr, Vaughan J.; Carrera, Noa; Catts, Stanley V.; Chambert, Kimberley D.; Cheng, Wei; Cloninger, C. Robert; Cohen, David; Cormican, Paul; Craddock, Nick; Crespo-Facorro, Benedicto; Crowley, James J.; Curtis, David; Davidson, Michael; Davis, Kenneth L.; Degenhardt, Franziska; Del Favero, Jurgen; DeLisi, Lynn E.; Dikeos, Dimitris; Dinan, Timothy; Djurovic, Srdjan; Donohoe, Gary; Drapeau, Elodie; Duan, Jubao; Dudbridge, Frank; Eichhammer, Peter; Eriksson, Johan; Escott-Price, Valentina; Essioux, Laurent; Fanous, Ayman H.; Farh, Kai How; Farrell, Martilias S.; Frank, Josef; Franke, Lude; Freedman, Robert; Freimer, Nelson B.; Friedman, Joseph I.; Forstner, Andreas J.; Fromer, Menachem; Genovese, Giulio; Georgieva, Lyudmila; Gershon, Elliot S.; Giegling, Ina; Giusti-Rodríguez, Paola; Godard, Stephanie; Goldstein, Jacqueline I.; Gratten, Jacob; De Haan, Lieuwe; Hamshere, Marian L.; Hansen, Mark; Hansen, Thomas; Haroutunian, Vahram; Hartmann, Annette M.; Henskens, Frans A.; Herms, Stefan; Hirschhorn, Joel N.; Hoffmann, Per; Hofman, Andrea; Huang, Hailiang; Ikeda, Masashi; Joa, Inge; Kähler, Anna K.; Kahn, René S.; Kalaydjieva, Luba; Karjalainen, Juha; Kavanagh, David; Keller, Matthew C.; Kelly, Brian J.; Kennedy, James L.; Kim, Yunjung; Knowles, James A.; Konte, Bettina; Laurent, Claudine; Lee, Phil; Lee, S. Hong; Legge, Sophie E.; Lerer, Bernard; Levy, Deborah L.; Liang, Kung Yee; Lieberman, Jeffrey; Lönnqvist, Jouko; Loughland, Carmel M.; Magnusson, Patrik K E; Maher, Brion S.; Maier, Wolfgang; Mallet, Jacques; Mattheisen, Manuel; Mattingsdal, Morten; McCarley, Robert W.; McDonald, Colm; McIntosh, Andrew M.; Meier, Sandra; Meijer, Carin J.; Melle, Ingrid; Mesholam-Gately, Raquelle I.; Metspalu, Andres; Michie, Patricia T.; Milani, Lili; Milanova, Vihra; Mokrab, Younes; Morris, Derek W.; Müller-Myhsok, Bertram; Murphy, Kieran C.; Murray, Robin M.; Myin-Germeys, Inez; Nenadic, Igor; Nertney, Deborah A.; Nestadt, Gerald; Nicodemus, Kristin K.; Nisenbaum, Laura; Nordin, Annelie; O'Callaghan, Eadbhard; O'Dushlaine, Colm; Oh, Sang Yun; Olincy, Ann; Olsen, Line; O'Neill, F. Anthony; Van Os, Jim; Pantelis, Christos; Papadimitriou, George N.; Parkhomenko, Elena; Pato, Michele T.; Paunio, Tiina; Perkins, Diana O.; Pers, Tune Hannes; Pietiläinen, Olli; Pimm, Jonathan; Pocklington, Andrew J.; Powell, John; Price, Alkes; Pulver, Ann E.; Purcell, Shaun M.; Quested, Digby; Rasmussen, H. B.; Reichenberg, Abraham; Reimers, Mark A.; Richards, Alexander L.; Roffman, Joshua L.; Roussos, Panos; Ruderfer, Douglas M.; Salomaa, Veikko; Sanders, Alan R.; Savitz, Adam; Schall, Ulrich; Schulze, Thomas G.; Schwab, Sibylle G.; Scolnick, Edward M.; Scott, Rodney J.; Seidman, Larry J.; Shi, Jianxin; Silverman, Jeremy M.; Smoller, Jordan W.; Söderman, Erik; Spencer, Chris C A; Stahl, Eli A.; Strengman, Eric; Strohmaier, Jana; Stroup, T. Scott; Suvisaari, Jaana; Svrakic, Dragan M.; Szatkiewicz, Jin P.; Thirumalai, Srinivas; Tooney, Paul A.; Veijola, Juha; Visscher, Peter M.; Waddington, John; Walsh, Dermot; Webb, Bradley T.; Weiser, Mark; Wildenauer, Dieter B.; Williams, Nigel M.; Williams, Stephanie; Witt, Stephanie H.; Wolen, Aaron R.; Wormley, Brandon K.; Wray, Naomi R.; Wu, J. Q.; Zai, Clement C.; Adolfsson, Rolf; Andreassen, Ole A.; Blackwood, Douglas H R; Bramon, Elvira; Buxbaum, Joseph D.; Cichon, Sven; Collier, David A.; Corvin, Aiden; Daly, Mark J.; Darvasi, Ariel; Domenici, Enrico; Esko, Tõnu; Gejman, Pablo V.; Gill, Michael; Gurling, Hugh; Hultman, Christina M.; Iwata, Nakao; Jablensky, Assen V.; Jönsson, Erik G.; Kendler, Kenneth S.; Kirov, George; Knight, Jo; Levinson, Douglas F.; Li, Qingqin S.; McCarroll, Steven A.; McQuillin, Andrew; Moran, Jennifer L.; Mowry, Bryan J.; Nöthen, Markus M.; Ophoff, Roel A.; Owen, Michael J.; Palotie, Aarno; Pato, Carlos N.; Petryshen, Tracey L.; Posthuma, Danielle; Rietschel, Marcella; Riley, Brien P.; Rujescu, Dan; Sklar, Pamela; St Clair, David; Walters, James T R; Werge, Thomas; Sullivan, Patrick F.; O'Donovan, Michael C.; Scherer, Stephen W.; Neale, Benjamin M.; Sebat, Jonathan.

    In: Nature Genetics, Vol. 49, No. 1, 2017, p. 27-35.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  5. Published

    Distinct roles for the IIId2 sub-domain in pestivirus and picornavirus internal ribosome entry sites. / Willcocks, Margaret M.; Zaini, Salmah; Chamond, Nathalie; Ulryck, Nathalie; Allouche, Delphine; Rajagopalan, Noemie; Davids, Nana A; Fahn E, Ulrik; Hadsbjerg, Johanne; Rasmussen, Thomas Bruun; Roberts, Lisa O.; Sargueil, Bruno; Belsham, Graham J; Locker, Nicolas.

    In: Nucleic Acids Research, Vol. 2017, gkx991, 2017.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  6. Published

    Dynamic Rearrangement of Cell States Detected by Systematic Screening of Sequential Anticancer Treatments. / Koplev, Simon; Longden, James; Ferkinghoff-Borg, Jesper; Blicher Bjerregård, Mathias; Cox, Thomas R.; Erler, Janine T.; Pedersen, Jesper T.; Voellmy, Franziska; Sommer, Morten Otto Alexander; Linding, Rune.

    In: Cell Reports, Vol. 20, No. 12, 2017, p. 2784-2791.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  7. Published

    Evolutionary analysis of whole-genome sequences confirms inter-farm transmission of Aleutian mink disease virus. / Hagberg, Emma Elisabeth; Pedersen, Anders Gorm; Larsen, Lars E; Krarup, Anders.

    In: Journal of General Virology, Vol. 98, No. 6, 2017, p. 1360-1371.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  8. Published
  9. Published
  10. Published

    Hierarchical Sets: Analyzing Pangenome Structure through Scalable Set Visualizations. / Pedersen, Thomas Lin.

    In: Bioinformatics, Vol. 33, No. 11, 2017, p. 1604-1612.

    Publication: Research - peer-reviewJournal article – Annual report year: 2017

  11. Published

    Light Sensitivity of Lactococcus lactis Thioredoxin Reductase. / Skjoldager, Nicklas; Hägglund, Per (Main supervisor); Svensson, Birte (Supervisor).

    Technical University of Denmark (DTU), 2017. 213 p.

    Publication: ResearchPh.D. thesis – Annual report year: 2017

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