Center for Biological Sequence Analysis

  1. 2016
  2. E-pub ahead of print

    15-year follow-up of the Second Nordic Mantle Cell Lymphoma trial (MCL2) : prolonged remissions without survival plateau. / Eskelund, Christian W.; Kolstad, Arne; Jerkeman, Mats; Räty, Riikka; Laurell, Anna; Eloranta, Sandra; Smedby, Karin E.; Husby, Simon; Pedersen, Lone B.; Andersen, Niels S.; Eriksson, Mikael; Kimby, Eva; Bentzen, Hans; Kuittinen, Outi; Lauritzsen, Grete F.; Nilsson-Ehle, Herman; Ralfkiaer, Elisabeth; Ehinger, Mats; Sundström, Christer; Delabie, Jan; Karjalainen-Lindsberg, Marja-Liisa; Workman, Christopher; Garde, Christian; Elonen, Erkki; Brown, Peter; Grønbaek, Kirsten; Geisler, Christian H.

    In: British Journal of Haematology, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  3. Published
  4. Published

    A combined prediction strategy increases identification of peptides bound with high affinity and stability to porcine MHC class I molecules SLA-1*04:01, SLA-2*04:01, and SLA-3*04:01. / Pedersen, Lasse Eggers; Rasmussen, Michael; Harndahl, Mikkel; Nielsen, Morten; Buus, Søren; Jungersen, Gregers.

    In: Immunogenetics, Vol. 68, No. 2, 2016, p. 157-165.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  5. E-pub ahead of print

    A comprehensive profile of recurrent glioblastoma. / Campos, B.; Olsen, Lars Rønn; Urup, T.; Poulsen, H. S.

    In: Oncogene, 2016.

    Publication: Research - peer-reviewReview – Annual report year: 2016

  6. Published

    A comprehensive survey of the mutagenic impact of common cancer cytotoxics. / Szikriszt, Bernadett; Poti, Adam; Pipek, Orsolya; Krzystanek, Marcin; Kanu, Nnennaya; Molnar, Janos; Ribli, Dezso; Szeltner, Zoltan; Tusnady, Gabor E.; Csabai, Istvan; Szallasi, Zoltan Imre; Swanton, Charles; Szuts, David.

    In: Genome Biology, Vol. 17, 99, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  7. Published

    A fast and robust method for whole genome sequencing of the Aleutian Mink Disease Virus (AMDV) genome. / Hagberg, Emma Elisabeth; Krarup, Anders; Fahnøe, Ulrik; Larsen, Lars Erik; Dam-Tuxen, Rebekka; Pedersen, Anders Gorm.

    In: Journal of Virological Methods, Vol. 234, 2016, p. 43-51.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  8. Published

    A Drosophila Genome-Wide Screen Identifies Regulators of Steroid Hormone Production and Developmental Timing. / Thomas Danielsen, E.; E. Møller, Morten; Yamanaka, Naoki; Ou, Qiuxiang; Laursen, Janne Marie; Soenderholm, Cæcilie; Zhuo, Ran; Phelps, Brian; Tang, Kevin; Zeng, Jie; Kondo, Shu; H. Nielsen, Christian; Harvald, Eva B.; Faergeman, Nils J.; J. Haley, Macy; A. O'Connor, Kyle; King-Jones, Kirst; B. O'Connor, Michael; F. Rewitz, Kim.

    In: Developmental Cell, Vol. 37, No. 6, 2016, p. 558-570.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  9. Accepted/In press

    Angiotensinogen and HLA class II predict bevacizumab response in recurrent glioblastoma patients. / Urup, Thomas; Michaelsen, Signe Regner; Olsen, Lars Rønn; Toft, Anders; Christensen, Ib Jarle; Grunnet, Kirsten; Winther, Ole; Broholm, Helle; Kosteljanetz, Michael; Issazadeh-Navikas, Shohreh; Poulsen, Hans Skovgaard; Lassen, Ulrik.

    In: Molecular Oncology, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  10. Accepted/In press

    Application of WGS data for O-specific antigen analysis and in silico serotyping of Pseudomonas aeruginosa isolates. / Thrane, Sandra Wingaard; Taylor, Véronique L.; Lund, Ole; Lam, Joseph S.; Jelsbak, Lars.

    In: Journal of Clinical Microbiology, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

  11. Published

    A robust prognostic gene expression signature for early stage lung adenocarcinoma. / Krzystanek, Marcin; Moldvay, Judit; Szüts, David; Szallasi, Zoltan Imre; Eklund, Aron Charles.

    In: Biomarker Research, Vol. 4, No. 4, 2016.

    Publication: Research - peer-reviewJournal article – Annual report year: 2016

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