Center for Biological Sequence Analysis

  1. Published

    The effect of maternal Inflammation on foetal programming of metabolic disease. / Ingvorsen, Camilla; Pedersen, Susanne Brix; Ozanne, S. E.; Hellgren, Lars.

    In: Acta Physiologica, Vol. 214, No. 4, 2015, p. 440-449.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  2. Published

    Defining the microbial effluxome in the content of the host-microbiome interaction. / Ioannidis, Anastasios; Magana, Maria; Bologa, Cristian G.; Oprea, Tudor I.; Paulsen, Ian T.; Tegos, George P.

    In: Frontiers in Pharmacology, Vol. 6, 31, 2015.

    Publication: Research - peer-reviewComment/debate – Annual report year: 2015

  3. Published

    Tools and data services registry : a community effort to document bioinformatics resources. / Ison, Jon; Rapacki, Kristoffer; Ménager, Hervé; Kalaš, Matúš; Rydza, Emil Karol; Chmura, Piotr Jaroslaw; Anthon, Christian; Beard, Niall; Berka, Karel; Bolser, Dan; Booth, Tim ; Bretaudeau, Anthony; Brezovsky, Jan; Casadio, Rita; Cesareni, Gianni; Coppens, Frederik; Cornell, Michael; Cuccuru, Gianmauro; Davidsen, Kristian; Vedova, Gianluca Della; Dogan, Tunca; Doppelt-Azeroual, Olivia; Emery, Laura; Gasteiger, Elisabeth; Gatter, Thomas; Goldberg, Tatyana; Grosjean, Marie; Grüning, Björn; Helmer-Citterich, Manuela; Ienasescu, Hans; Ioannidis, Vassilios; Jespersen, Martin Closter; Jimenez, Rafael; Juty, Nick; Juvan, Peter; Koch, Maximilian; Laibe, Camille; Li, Jing-Woei; Licata, Luana; Mareuil, Fabien; Mičetić, Ivan; Friborg, Rune Møllegaard; Moretti, Sebastien; Morris, Chris; Möller, Steffen; Nenadic, Aleksandra; Peterson, Hedi; Profiti, Giuseppe; Rice, Peter; Romano, Paolo; Roncaglia, Paola; Saidi, Rabie; Schafferhans, Andrea; Schwämmle, Veit; Smith, Callum; Sperotto, Maria Maddalena; Stockinger, Heinz; Vařeková, Radka Svobodová; Tosatto, Silvio C. E.; de la Torre, Victor; Uva, Paolo; Via, Allegra; Yachdav, Guy; Zambelli, Federico; Vriend, Gert; Rost, Burkhard; Parkinson, Helen; Løngreen, Peter; Brunak, Søren.

    In: Nucleic Acids Research, Vol. 44, No. D1, gkv1116, 2015, p. D38-D47.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  4. Published

    Towards High-throughput Immunomics for Infectious Diseases: Use of Next-generation Peptide Microarrays for Rapid Discovery and Mapping of Antigenic Determinants. / J. Carmona, Santiago; Nielsen, Morten; Schafer-Nielsen, Claus; Mucci, Juan; Altcheh, Jaime; Balouz, Virginia; Tekiel, Valeria; C. Frasch, Alberto; Campetella, Oscar; A. Buscaglia, Carlos; Agüero, Fernán.

    In: Molecular & Cellular Proteomics, Vol. 14, No. 7, 2015, p. 1871-1884.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  5. Published

    Developing a Molecular Roadmap of Drug-Food Interactions. / Jensen, Kasper; Ni, Yueqiong; Panagiotou, Gianni; Kouskoumvekaki, Irene.

    In: P L o S Computational Biology (Online), Vol. 11, No. 2, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  6. Published

    Distinct inflammatory and cytopathic characteristics of Escherichia coli isolates from inflammatory bowel disease patients. / Jensen, Stina Rikke; Mirsepasi-Lauridsen, Hengameh Chloé; Thysen, Anna Hammerich; Brynskov, Jørn; Krogfelt, Karen Angeliki; Petersen, Andreas Munk; Pedersen, Anders Elm; Brix, Susanne.

    In: International Journal of Medical Microbiology, Vol. 305, No. 8, 2015, p. 925-936.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  7. Published

    Establishment and characterization of models of chemotherapy resistance in colorectal cancer: Towards a predictive signature of chemoresistance. / Jensen, Niels F.; Stenvang, Jan; Beck, Mette Kristina; Hanáková, Barbora; Belling, Kirstine C.; Nguyen Do, Khoa; Viuff, Birgitte; Nygård, Sune B.; Gupta, Ramneek; Rasmussen, Mads H.; Tarpgaard, Line S.; Hansen, Tine P.; Budinská, Eva; Pfeiffer, Per; Bosman, Fred; Tejpar, Sabine; Roth, Arnaud; Delorenzi, Mauro; Andersen, Claus L.; Rømer, Maria U.; Brünner, Nils; Moreira, José M.A.

    In: Molecular Oncology, Vol. 9, No. 6, 2015, p. 1169-1185.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  8. Published

    Long-term risk of cardiovascular and cerebrovascular disease after removal of the colonic microbiota by colectomy: a cohort study based on the Danish National Patient Register from 1996 to 2014. / Jensen, Anders Boeck; Ajslev, Teresa Adeltoft; Brunak, Søren; Sørensen, Thorkild I A.

    In: Open Journal of Ecology, Vol. 5, No. 12, e008702, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

  9. Published

    NutriChem: a systems chemical biology resource to explore the medicinal value of plant-based foods. / Jensen, Kasper; Panagiotou, Gianni; Kouskoumvekaki, Irene.

    In: Nucleic Acids Research, Vol. 43, 2015, p. D940-D945.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  10. Published

    Transcriptome and genome size analysis of the venus flytrap. / Jensen, Michael Krogh; Vogt, Josef Korbinian; Bressendorff, Simon; Seguin-Orlando, Andaine; Petersen, Morten; Sicheritz-Pontén, Thomas; Mundy, John.

    In: P L o S One, Vol. 10, No. 4, e0123887, 2015.

    Publication: Research - peer-reviewJournal article – Annual report year: 2015

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