Center for Biological Sequence Analysis

  1. Published

    CoreFlow: A computational platform for integration, analysis and modeling of complex biological data. / Pasculescu, Adrian; Schoof, Erwin; Creixell, Pau; Zheng, Yong; Olhovsky, Marina; Tian, Ruijun; So, Jonathan; Vanderlaan, Rachel D.; Pawson, Tony; Linding, Rune; Colwill, Karen.

    In: Journal of Proteomics, Vol. 100, 2014, p. 167-173.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  2. Published

    Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans. / Raghavan, Maanasa; Skoglund, Pontus; Graf, Kelly E.; Metspalu, Mait; Albrechtsen, Anders; Moltke, Ida; Rasmussen, Simon; Stafford jr., Thomas; Orlando, Ludovic Antoine Alexandre; Metspalu, Ene; Karmin, Monika; Tambets, Kristiina; Rootsi, Siiri; Mägi, Reedik; Campos, Paula; Balanovska, Elena; Balanovsky, Oleg; Khusnutdinova, Elza; Litvinov, Sergey; Osipova, Ludmila P; Fedorova, Sardana A; Voevoda, Mikhail I; Degiorgio, Michael; Sicheritz-Pontén, Thomas; Brunak, Søren; Demeshchenko, Svetlana; Kivisild, Toomas; Villems, Richard; Nielsen, Rasmus; Jakobsson, Mattias; Willerslev, Eske.

    In: Nature, Vol. 505, No. 7481, 2014, p. 87–91.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  3. Published

    The genome of a Late Pleistocene human from a Clovis burial site in western Montana.. / Rasmussen, Morten; Anzick, Sarah L.; Waters, Michael R; Skoglund, Pontus; DeGiorgio, Michael; Stafford, Thomas W, Jr; Rasmussen, Simon; Moltke, Ida; Albrechtsen, Anders; Doyle, Shane M; Poznik, G David; Gudmundsdottir, Valborg; Yadav, Rachita; Malaspinas, Anna Sapfo; White, Samuel Stockton, 5th; Allentoft, Morten Erik; Cornejo, Omar E.; Tambets, Kristiina; Eriksson, Anders; Heintzman, Peter D.; Karmin, Monika; Korneliussen, Thorfinn Sand; Meltzer, David J.; Pierre, Tracey Lynn; Stenderup, Jesper; Saag, Lauri; Warmuth, Vera M; Lopes, Margarida C; Malhi, Ripan S.; Brunak, Søren; Sicheritz-Pontén, Thomas; Barnes, Ian; Collins, Matthew; Orlando, Ludovic Antoine Alexandre; Balloux, Francois; Manica, Andrea; Gupta, Ramneek; Metspalu, Mait; Bustamante, Carlos D; Jakobsson, Mattias; Nielsen, Rasmus; Willerslev, Eske.

    In: Nature, Vol. 506, No. 7487, 2014, p. 225-229.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  4. Published

    RNA-protein interactions: an overview.. / Re, Angela; Joshi, Tejal; Kulberkyte, Eleonora; Morris, Quaid; Workman, Christopher.

    RNA Sequence, Structure, and Function: Computational and Bioinformatic Methods: Springer Protocols. Vol. 1097 2014. p. 491-521 (Methods in Molecular Biology, Vol. 1097).

    Publication: Research - peer-reviewBook chapter – Annual report year: 2014

  5. Published

    The effect of a short-term high-fat overfeeding on plasma levels of amino acids in young, healthy men with low or normal birth weight. / Ribel-Madsen, Amalie; Hellgren, Lars; Brøns , Charlotte; Ribel-Madsen , Rasmus; B. Newgard , Christopher; A. Vaag , Allan.

    2014. Abstract from The 11th Biennial ISSFAL Congress 2014, Stockholm, Sweden.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2014

  6. Published

    The effect of a short-term high-fat overfeeding on plasma levels of amino acids in young, healthy men with low or normal birth weight. / Ribel-Madsen, Amalie; Hellgren, Lars; Brøns , Charlotte; Ribel-Madsen , Rasmus; B. Newgard , Christopher; A. Vaag , Allan.

    2014. Abstract from The Power of Programming Conference, Munich, Germany.

    Publication: Research - peer-reviewConference abstract for conference – Annual report year: 2014

  7. Published

    DNA secondary structures are associated with recombination in major Plasmodium falciparum variable surface antigen gene families. / Sander, Adam F.; Lavstsen, Thomas; Rask, Thomas Salhøj; Lisby, Michael; Salanti, Ali; Fordyce, Sarah L.; Jespersen, Jakob S.; Carter, Richard; Deitsch, Kirk W.; Theander, Thor G.; Pedersen, Anders Gorm; Arnot, David E.

    In: Nucleic Acids Research, Vol. 42, No. 4, 2014, p. 202270-2281.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  8. Published

    Experimental and computational tools for analysis of signaling networks in primary cells. / Schoof, Erwin M; Linding, Rune.

    In: Current Protocols in Immunology, Vol. 104, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  9. Published

    Effect of subinhibitory concentrations of four commonly used biocides on the conjugative transfer of Tn916 in Bacillus subtilis. / Seier-Petersen, Maria Amalie; Jasni, A.; Aarestrup, Frank Møller; Vigre, Håkan; Mullany, P.; Roberts, A. P.; Agersø, Yvonne.

    In: Journal of Antimicrobial Chemotherapy, Vol. 69, No. 2, 2014, p. 343-348.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  10. Published

    Natural mannosylation of HIV-1 gp120 imposes no immunoregulatory effects in primary human plasmacytoid dendritic cells. / Søndergaard, Jonas Nørskov; Vinner, Lasse; Pedersen, Susanne Brix.

    In: Molecular Immunology, Vol. 59, No. 2, 2014, p. 180-187.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

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