P L o S One

ISSNs: 1932-6203, 19326203

Public Library of Science, United States

ISI indexed (2013): yes, FI (2013): 1

Central database

Journal

  1. 2014
  2. Published

    Acetate Kinase Isozymes Confer Robustness in Acetate Metabolism. / Chan, Siu Hung Joshua; Nørregaard, Lasse; Solem, Christian; Jensen, Peter Ruhdal.

    In: PLOS ONE, Vol. 9, No. 3, e92256, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  3. Published
  4. Published
  5. Published

    A Model of Proteostatic Energy Cost and Its Use in Analysis of Proteome Trends and Sequence Evolution.. / Kepp, Kasper Planeta.

    In: PLoS ONE, Vol. 9, No. 2, e90504, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  6. An Eye-Tracking Paradigm for Analyzing the Processing Time of Sentences with Different Linguistic Complexities. / Wendt, Dorothea; Brand, Thomas; Kollmeier, Birger.

    In: PLoS ONE, Vol. 9, No. 6, e100186, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  7. Published

    A resolution to the blue whiting (Micromesistius poutassou) population paradox?. / Pointin, Fabien; Payne, Mark R.

    In: P L o S One, Vol. 9, No. 9, e106237, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  8. Published

    Assessment of the Sensitizing Potential of Processed Peanut Proteins in Brown Norway Rats: Roasting Does Not Enhance Allergenicity. / Kroghsbo, Stine; Rigby, Neil M.; Johnson, Philip L F; Adel-Patient, Karine; Bøgh, Katrine Lindholm; Salt, Louise J.; Mills, E. N. Clare; Madsen, Charlotte Bernhard.

    In: P L o S One, Vol. 9, No. 5, e96475, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  9. Published
  10. Published
  11. Published

    Bacteria and fungi respond differently to multifactorial climate change in a temperate heathland, traced with 13C-Glycine and FACE CO2. / Andresen, Louise C.; Dungait, Jennifer A.J.; Bol, Roland; Selsted, Merete Bang; Ambus, Per; Michelsen, Anders.

    In: P L o S One, Vol. 9, No. 1, e85070, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  12. Published

    Characterization of an Alkali- and Halide-Resistant Laccase Expressed in E. coli: CotA from Bacillus clausii. / Brander, Søren; Mikkelsen, Jørn Dalgaard; Kepp, Kasper Planeta.

    In: P L o S One, Vol. 9, No. 6, e99402, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  13. Published
  14. Published

    Coping with unpredictability: Dopaminergic and neurotrophic responses to omission of expected reward in Atlantic salmon (Salmo salar L.).. / Vindas, Marco A; Sørensen, Christina; Johansen, Ida; Folkedal, Ole; Höglund, Erik; Khan, Uniza W; Stien, Lars H; Kristiansen, Tore; Braastad, Bjarne O; Overli, Oyvind.

    In: PloS one., Vol. 9, No. 1, 2014, p. e85543.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  15. Published

    Evaluation of whole genome sequencing for outbreak detection of Salmonella enterica. / Leekitcharoenphon, Pimlapas; Nielsen, Eva M.; Kaas, Rolf Sommer; Lund, Ole; Aarestrup, Frank Møller.

    In: P L o S One, Vol. 9, No. 2, e87991, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  16. Published

    Extended-Spectrum-Beta-Lactamases, AmpC Beta-Lactamases and Plasmid Mediated Quinolone Resistance in Klebsiella spp. from Companion Animals in Italy. / Donati, Valentina; Feltrin, Fabiola; Hendriksen, Rene S.; Svendsen, Christina Aaby; Cordaro, Gessica; Garcia-Fernandez, Aurora; Lorenzetti, Serena; Lorenzetti, Raniero; Battisti, Antonio; Franco, Alessia.

    In: PLOS ONE, Vol. 9, No. 3, e90564, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  17. Published

    Fixed and flexible: coexistence of obligate and facultative migratory strategies in a freshwater fish. / Hansson, Lars-Anders; Brönmark, Christer; Nilsson, Anders; Chapman, Ben; Skov, Christian.

    In: PLoS ONE, Vol. 9, No. 3, e90294, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  18. Published
  19. Published

    How Fitness Reduced, Antimicrobial Resistant Bacteria Survive and Spread : A Multiple Pig - Multiple Bacterial Strain Model. / Græsbøll, Kaare; Nielsen, Søren Saxmose; Toft, Nils; Christiansen, Lasse Engbo.

    In: P L o S One, Vol. 9, No. 7, e100458, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  20. Published

    Human Intestinal Cells Modulate Conjugational Transfer of Multidrug Resistance Plasmids between Clinical Escherichia coli Isolates.. / Machado, Ana Manuel; Sommer, Morten.

    In: P L o S One, Vol. 9, No. 6, 2014, p. e100739.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  21. Published

    Identification and HLA-Tetramer-Validation of Human CD4(+) and CD8(+) T Cell Responses against HCMV Proteins IE1 and IE2. / Braendstrup, Peter; Mortensen, Bo Kok; Justesen, Sune Frederik Lamdahl; Osterby, Thomas; Rasmussen, Michael; Hansen, Andreas Martin; Christiansen, Claus Bohn; Hansen, Morten Bagge; Nielsen, Morten; Vindelov, Lars; Buus, Søren; Stryhn, Anette.

    In: PLOS ONE, Vol. 9, No. 4, e94892, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  22. Published

    Identification of Metabolic Pathways Essential for Fitness of Salmonella Typhimurium In Vivo. / Jelsbak, Lotte; Hartman, Hassan ; Schroll, Casper; Rosenkrantz, Jesper Tjørnholt; Lemire, Sebastien; Wallrodt, Inke; Thomsen, Line Elnif; Poolman, Mark ; Kilstrup, Mogens; Jensen, Peter Ruhdal; Olsen, John E.

    In: P L o S One, Vol. 9, No. 7, e101869, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  23. Published

    Identification of Odorant-Receptor Interactions by Global Mapping of the Human Odorome. / Audouze, Karine Marie Laure; Tromelin, Anne; Le Bon, Anne Marie; Belloir, Christine; Petersen, Rasmus Koefoed; Kristiansen, Karsten; Brunak, Søren; Taboureau, Olivier .

    In: PLOS ONE, Vol. 9, No. 4, e93037, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  24. Improved lanthipeptide detection and prediction for antiSMASH. / Blin, Kai; Kazempour, Daniyal; Wohlleben, Wolfgang; Weber, Tilmann.

    In: P L o S One, Vol. 9, No. 2, e89420, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  25. Published

    Inferring fish escape behaviour in trawls based on catch comparison data: Model development and evaluation based on data from Skagerrak, Denmark. / Krag, Ludvig Ahm; Herrmann, Bent; Karlsen, Junita Diana.

    In: PLoS ONE, Vol. 9, No. 2, e88819, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  26. Published

    Local adaptation at the transcriptome level in brown trout: Evidence from early life history temperature genomic reaction norms. / Meier, Kristian; Hansen, Michael Møller; Normandeau, Eric.

    In: PLoS ONE, Vol. 9, No. 1, e85171, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  27. Published

    Loss of Social Behaviours in Populations of Pseudomonas aeruginosa Infecting Lungs of Patients with Cystic Fibrosis. / Jiricny, Natalie; Molin, Søren; Foster, Kevin; Diggle, Stephen P.; Scanlan, Pauline D.; Ghoul, Melanie; Johansen, Helle Krogh; Santorelli, Lorenzo A.; Popat, Roman; West, Stuart A.; Griffin, Ashleigh S.

    In: P L o S One, Vol. 9, No. 1, 2014, p. Article No.: e83124.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  28. Published

    Low Physical Activity Level and Short Sleep Duration Are Associated with an Increased Cardio-Metabolic Risk Profile: A Longitudinal Study in 8-11 Year Old Danish Children. / Hjorth, Mads F.; Chaput, Jean-Philippe; Damsgaard, Camilla T.; Dalskov, Stine-Mathilde; Andersen, Rikke; Astrup, Arne; Michaelsen, Kim F.; Tetens, Inge; Ritz, Christian; Sjodin, Anders.

    In: PLOS ONE, Vol. 9, No. 8, e104677, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  29. Published

    Measuring Large-Scale Social Networks with High Resolution. / Stopczynski, Arkadiusz; Sekara, Vedran; Sapiezynski, Piotr; Cuttone, Andrea; Madsen, Mette My; Larsen, Jakob Eg; Lehmann, Sune .

    In: PLOS ONE, Vol. 9, No. 4, e95978, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  30. Published

    Phylogenetic Analysis of Staphylococcus aureus CC398 Reveals a Sub-Lineage Epidemiologically Associated with Infections in Horses. / Abdelbary, Mohamed M. H.; Wittenberg, Anne; Cuny, Christiane; Layer, Franziska; Kurt, Kevin; Wieler, Lothar H.; Walther, Birgit; Skov, Robert; Larsen, Jesper; Hasman, Henrik; Fitzgerald, J. Ross; Smith, Tara C.; Wagenaar, J. A.; Pantosti, Annalisa; Hallin, Marie; Struelens, Marc J.; Edwards, Giles; Boese, R.; Nuebel, Ulrich; Witte, Wolfgang.

    In: PLOS ONE, Vol. 9, No. 2, e88083, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  31. Published
  32. Published

    Secondary Progressive and Relapsing Remitting Multiple Sclerosis Leads to Motor-Related Decreased Anatomical Connectivity. / Lyksborg, Mark; Siebner, Hartwig R.; Sørensen, Per S.; Blinkenberg, Morten; Parker, Geoff J. M.; Dogonowski, Anne-Marie; Garde, Ellen; Larsen, Rasmus; Dyrby, Tim B.

    In: P L o S One, Vol. 9, No. 4, e95540, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  33. Published
  34. Published

    Solonamide B Inhibits Quorum Sensing and Reduces Staphylococcus aureus Mediated Killing of Human Neutrophils. / Nielsen, Anita; Månsson, Maria; Bojer, Martin S.; Gram, Lone; Larsen, Thomas Ostenfeld; Novick, Richard P.; Frees, Dorte; Frøkiær, Hanne; Ingmer, Hanne.

    In: P L o S One, Vol. 9, No. 1, e84992, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  35. Published

    The Application of New Molecular Methods in the Investigation of a Waterborne Outbreak of Norovirus in Denmark, 2012. / van Alphen, Lieke B.; Dorleans, Frederique; Schultz, Anna Charlotte; Fonager, Jannik; Ethelberg, Steen; Dalgaard, Camilla; Adelhardt, Marianne; Engberg, Jørgen; Kølsen Fischer, Thea.

    In: P L o S One, Vol. 9, No. 9, e105053, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  36. Published

    The Fire-Walker’s High: Affect and Physiological Responses in an Extreme Collective Ritual. / Fischer, Ronald; Xygalatas, Dimitris; Mitkidis, Panagiotis; Reddish, Paul; Tok, Penny; Konvalinka, Ivana; Bulbulia, Joseph.

    In: P L o S One, Vol. 9, No. 2, e88355, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  37. Published

    The Impact of Resources for Clinical Surveillance on the Control of a Hypothetical Foot-and-Mouth Disease Epidemic in Denmark.. / Hisham Beshara Halasa, Tariq; Boklund, Anette .

    In: PLoS ONE, Vol. 9, No. 7, e102480, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  38. Published

    The Role of the st313-td Gene in Virulence of Salmonella Typhimurium ST313. / Herrero-Fresno, Ana; Wallrodt, Inke; Leekitcharoenphon, Pimlapas; Olsen, John Elmerdahl; Aarestrup, Frank Møller; Hendriksen, Rene S.

    In: PLOS ONE, Vol. 9, No. 1, e84566, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  39. Published

    The Smartphone Brain Scanner: A Portable Real-Time Neuroimaging System. / Stopczynski, Arkadiusz; Stahlhut, Carsten; Larsen, Jakob Eg; Petersen, Michael Kai; Hansen, Lars Kai.

    In: P L o S One, Vol. 9, No. 2, e86733, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  40. Published

    The Strength of Friendship Ties in Proximity Sensor Data. / Sekara, Vedran; Jørgensen, Sune Lehmann.

    In: P L o S One, Vol. 9, No. 7, e100915, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  41. Published

    Thyroid Function and Body Weight: A Community-Based Longitudinal Study. / Bjergved, Lena; Jørgensen, Torben; Perrild, Hans; Laurberg, Peter; Krejbjerg, Anne; Ovesen, Lars; Rasmussen, Lone Banke; Knudsen, Nils.

    In: PLOS ONE, Vol. 9, No. 4, e93515, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  42. Published

    Vitamin D Binding Protein Genotype Is Associated with Serum 25-Hydroxyvitamin D and PTH Concentrations, as Well as Bone Health in Children and Adolescents in Finland. / Pekkinen, Minna; Saarnio, Elisa; Viljakainen, Heli T.; Kokkonen, Elina; Jakobsen, Jette; Cashman, Kevin; Makitie, Outi; Lamberg-Allardt, Christel.

    In: PLOS ONE, Vol. 9, No. 1, e87292, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  43. Submitted

    When push comes to shove verbs literally shake due to latent semantic parameters of size and intensity. / Petersen, Michael Kai.

    In: P L o S One, 2014.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  44. Published
  45. 2013
  46. Published

    Adaptive Evolution of Escherichia coli to an α-Peptide/β-Peptoid Peptidomimetic Induces Stable Resistance.. / Hein-Kristensen, Line; Franzyk, Henrik; Holch, Anne; Gram, Lone.

    In: PloS one., Vol. 8, No. 9, e73620, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  47. Published

    A foraging cost of migration for a partially migratory cyprinid fish. / Chapman, Ben B; Eriksen, Anders; Baktoft, Henrik; Brodersen, Jakob; Nilsson, P Anders; Hulthen, Kaj; Brönmark, Christer; Hansson, Lars-Anders; Grønkjær, Peter; Skov, Christian.

    In: P L o S One, Vol. 8, No. 5, 2013, p. e61223.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  48. Published

    A Loss-of-Function Screen for Phosphatases that Regulate Neurite Outgrowth Identifies PTPN12 as a Negative Regulator of TrkB Tyrosine Phosphorylation. / Ambjørn, Malene; Dubreuil, Véronique; Miozzo, Federico; Nigon, Fabienne; Møller, Bente; Issazadeh-Navikas, Shohreh; Berg, Jacob; Lees, Michael; Sap, Jan.

    In: PloS one., Vol. 8, No. 6, e65371, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  49. Published

    Amino Acid Usage Is Asymmetrically Biased in AT- and GC-Rich Microbial Genomes.. / Bohlin, Jon; Brynildsrud, Ola Brønstad; Vesth, Tammi Camilla; Skjerve, Eystein; Ussery, David.

    In: PLoS ONE, Vol. 8, No. 7, e69878, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  50. An optimized histochemical method to assess skeletal muscle glycogen and lipid stores reveals two metabolically distinct populations of type I muscle fibers.. / Prats, Clara; Gomez-Cabello, Alba; Nordby, Pernille; Andersen, Jesper L; Helge, Jørn W.; Dela, Flemming; Baba, Otto; Ploug, Thorkil.

    In: PloS one., Vol. 8, No. 10, 2013, p. e77774.

    Publication: ResearchJournal article – Annual report year: 2013

  51. Published

    Association between Polymorphisms in Glutathione Peroxidase and Selenoprotein P Genes, Glutathione Peroxidase Activity, HRT Use and Breast Cancer Risk.. / Méplan, Catherine; Dragsted, Lars Ove; Ravn-Haren, Gitte; Tjønneland, Anne; Vogel, Ulla; Hesketh, John.

    In: PloS one., Vol. 8, No. 9, e73316, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  52. Published

    A Step Forward in Molecular Diagnostics of Lyssaviruses – Results of a Ring Trial among European Laboratories. / Fischer, Melina; Wernike, Kerstin; Freuling, Conrad M.; Müller, Thomas ; Aylan, Orhan; Brochier, Bernard; Cliquet, Florence; Vázquez-Morón, Sonia; Hostnik, Peter; Huovilainen, Anita; Isaksson, Mats; Kooi, Engbert A.; Mooney, Jean; Turcitu, Mihai; Rasmussen, Thomas Bruun; Revilla-Fernández, Sandra; Smreczak, Marcin; Fooks, Anthony R.; Marston, Denise A.; Beer, Martin; Hoffmann, Bernd.

    In: P L o S One, Vol. 8, No. 3, 2013, p. e58372.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  53. Published

    A Unified Model of the GABA(A) Receptor Comprising Agonist and Benzodiazepine Binding Sites. / Kongsbak, Kristine Grønning; Bergmann, Rikke; Sørensen, Pernille Louise; Sander, Tommy; Balle, Thomas.

    In: P L o S One, Vol. 8, No. 1, 2013, p. e52323.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  54. Published

    Biasogram: visualization of confounding technical bias in gene expression data.. / Krzystanek, Marcin; Szallasi, Zoltan Imre; Eklund, Aron Charles.

    In: P L o S One, Vol. 8, No. 4, 2013, p. e61872.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  55. Published

    Blood-Brain Barrier Permeability of Normal Appearing White Matter in Relapsing-Remitting Multiple Sclerosis. / Lund, Henrik; Krakauer, Martin; Skimminge, Arnold; Sellebjerg, Finn; Garde, Ellen; Siebner, Hartwig R.; Paulson, Olaf B. ; Hesse, Dan; Hanson, Lars G. .

    In: P L o S One, Vol. 8, No. 2, e56375, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  56. Published

    Characterisation of Gut Microbiota in Ossabaw and Göttingen Minipigs as Models of Obesity and Metabolic Syndrome. / Pedersen, Rebecca; Ingerslev, Hans-Christian; Sturek, Michael; Alloosh, Mouhamad; Cirera, Susanna; Christoffersen, Berit Ø.; Moesgaard, Sophia G.; Larsen, Niels; Boye, Mette.

    In: P L o S One, Vol. 8, No. 2, 2013, p. e56612.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  57. Published
  58. Published

    CMG-Biotools, a Free Workbench for Basic Comparative Microbial Genomics.. / Vesth, Tammi Camilla; Lagesen, Karin; Acar, Öncel; Ussery, David.

    In: P L o S One, Vol. 8, No. 4, 2013, p. e60120.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  59. Published

    Complete genes may pass from food to human blood. / Spisák, Sándor; Solymosi, Norbert; Ittzés, Péter; Bodor, András; Kondor, Dániel; Vattay, Gábor; Barták, Barbara K; Sipos, Ferenc; Galamb, Orsolya; Tulassay, Zsolt; Szállási, Zoltán; Rasmussen, Simon; Sicheritz-Ponten, Thomas; Brunak, Søren; Molnár, Béla; Csabai, István.

    In: PloS one., Vol. 8, No. 7, e69805, 2013, p. 11.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  60. Published
  61. Published

    Conserving the birds of Uganda's Banana-Coffee Arc: Land Sparing and Land Sharing Compared. / Hulme, Mark F.; Vickery, Juliet A.; Green, Rhys E.; Phalan, Ben; Chamberlain, Dan E.; Pomeroy, Derek E.; Nalwanga, Dianah; Mushabe, David; Katebaka, Raymond; Bolwig, Simon; Atkinson, Philip W.

    In: P L o S One, Vol. 8, No. 2, 2013, p. e54597.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  62. Dynamics of specific anti-Mycobacterium avium subsp. paratuberculosis antibody response through age. / Nielsen, Søren Saxmose; Toft, Nils; Okura, Hisako.

    In: P L o S One, Vol. 8, No. 4, e63009, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  63. Published

    Effect of Hydrogen Peroxide on Immersion Challenge of Rainbow Trout Fry with Flavobacterium psychrophilum. / Henriksen, Maya Maria Mihályi; Madsen, Lone; Dalsgaard, Inger.

    In: P L o S One, Vol. 8, No. 4, 2013, p. e62590.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  64. Published

    Effect of type and concentration of ballasting particles on sinking rate of marine snow produced by the Appendicularian Oikopleura dioica. / Lombard, Fabien; Guidi, L.; Kiørboe, Thomas.

    In: PLoS ONE, Vol. 8, No. 9, e75676, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  65. Published

    Aspergillus luchuensis, an industrially important black Aspergillus in East Asia. / Hong, Seung-Beom ; Lee, Mina; Kim, Dae-Ho ; Varga, J.; Frisvad, Jens Christian; Perrone, G.; Gomi, K.; Yamada, O.; Machida, M.; Houbraken, J.; Samson, Robert A.

    In: PLoS ONE, Vol. 8, No. 5, e63769, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  66. Published
  67. Published

    Enterococcus faecalis Infection Causes Inflammation, Intracellular Oxphos-Independent ROS Production, and DNA Damage in Human Gastric Cancer Cells. / Strickertsson, Jesper A. B; Desler, Claus; Martin-Bertelsen, Tomas; Machado, Ana Manuel; Wadstrøm, Torkel; Winther, Ole; Rasmussen, Lene Juel; Friis-Hansen, Lennart.

    In: P L o S One, Vol. 8, No. 4, e63147, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  68. Published

    Establishment of Stably Transfected Cells Constitutively Expressing the Full-Length and Truncated Antigenic Proteins of Two Genetically Distinct Mink Astroviruses. / Bidokhti, Mehdi R. M.; Ullman, Karin; Jensen, Trine Hammer; Chriél, Mariann; Mottahedin, Amin; Munir, Muhammad; Andersson, Anna Maria; Detournay, Olivier; Hammer , Anne Sofie ; Baule, Claudia.

    In: PLOS ONE, Vol. 8, No. 12, e82978, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  69. Published

    Genome-scale modeling of the protein secretory machinery in yeast. / Feizi, Amir; Österlund, Tobias; Petranovic, Dina; Bordel, Sergio; Nielsen, Jens.

    In: PloS one., Vol. 8, No. 5, 2013, p. e63284.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  70. Published
  71. Published

    Industrial Systems Biology of Saccharomyces cerevisiae Enables Novel Succinic Acid Cell Factory.. / Otero, José Manuel; Cimini, Donatella; Patil, Kiran Raosaheb; Poulsen, Simon Guldberg; Olsson, Lisbeth; Nielsen, Jens.

    In: P L o S One, Vol. 8, No. 1, e54144, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  72. Published

    Interactions between Diet, Lifestyle and IL10, IL1B, and PTGS2/COX-2 Gene Polymorphisms in Relation to Risk of Colorectal Cancer in a Prospective Danish Case-Cohort Study.. / Andersen, Vibeke; Holst, René; Kopp, Tine Iskov; Tjønneland, Anne; Vogel, Ulla Birgitte.

    In: PloS one., Vol. 8, No. 10, e78366, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  73. Published
  74. Published

    Low-Bandwidth and Non-Compute Intensive Remote Identification of Microbes from Raw Sequencing Reads. / Gautier, Laurent; Lund, Ole.

    In: P L o S One, Vol. 8, No. 12, e83784, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  75. Published
  76. Modulating Membrane Composition Alters Free Fatty Acid Tolerance in Escherichia coli. / Lennen, Rebecca M; Pfleger, Brian F.

    In: P L o S One, Vol. 8, No. 1, e54031, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  77. Published

    Organization and Biology of the Porcine Serum Amyloid A (SAA) Gene Cluster: Isoform Specific Responses to Bacterial Infection.. / Olsen, Helle G; Skovgaard, Kerstin; Nielsen, Ole L; Leifsson, Páll S.; Jensen, Henrik E.; Iburg, Tine; Heegaard, Peter M. H.

    In: PloS one., Vol. 8, No. 10, e76695, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  78. Published

    Particle-induced pulmonary acute phase response correlates with neutrophil influx linking inhaled particles and cardiovascular risk. / Saber, Anne Thoustrup; Lamson, Jacob Stuart; Jacobsen, Nicklas Raun; Ravn-Haren, Gitte; Hougaard, Karin Sørig; Nyendi, Allen Njimeri; Wahlberg, Pia; Madsen, Anne Mette; Jackson, Petra; Wallin, Håkan; Vogel, Ulla Birgitte.

    In: PloS one., Vol. 8, No. 7, e69020, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  79. Published

    PathogenFinder - Distinguishing Friend from Foe Using Bacterial Whole Genome Sequence Data.. / Cosentino, Salvatore; Larsen, Mette Voldby; Aarestrup, Frank Møller; Lund, Ole.

    In: PloS one., Vol. 8, No. 10, 2013, p. e77302.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  80. Published

    Pig α1-Acid Glycoprotein: Characterization and First Description in Any Species as a Negative Acute Phase Protein.. / Heegaard, Peter M. H.; Miller, Ingrid; Sørensen, Nanna Skall; Søerensen, Karen Elisabeth; Skovgaard, Kerstin.

    In: P L o S One, Vol. 8, No. 7, e68110, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  81. Published

    Polarisation of Major Histocompatibility Complex II Host Genotype with Pathogenesis of European Brown Hare Syndrome Virus.. / Iacovakis, Christos; Mamuris, Zissis; Moutou, Katerina A; Touloudi, Antonia; Hammer , Anne Sofie ; Valiakos, George; Giannoulis, Themis; Stamatis, Costas; Spyrou, Vassiliki; Athanasiou, Labrini V; Kantere, Maria; Asferg, Tommy; Giannakopoulos, Alexios; Salomonsen, Charlotte Mark; Bogdanos, Dimitrios; Birtsas, Periklis; Petrovska, Liljana; Hannant, Duncan; Billinis, Charalambos.

    In: P L o S One, Vol. 8, No. 9, e74360, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  82. Published

    Poly(Dimethylsiloxane) (PDMS) Affects Gene Expression in PC12 Cells Differentiating into Neuronal-Like Cells. / Lopacinska, Joanna M.; Emnéus, Jenny; Dufva, Martin.

    In: P L o S One, Vol. 8, No. 1, 2013, p. e53107.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  83. Published

    Population structure of Atlantic Mackerel (Scomber scombrus). / Jansen, Teunis; Gislason, Henrik.

    In: PLoS ONE, Vol. 8, No. 5, 2013, p. e64744.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  84. Published

    Pre- and early-postnatal nutrition modify gene and protein expressions of muscle energy metabolism markers and phospholipid fatty acid composition in a muscle type specific manner in sheep.. / Hou, Lei; Kongsted, Alice; Ghoreishi, S. M.; Takhtsabzy, T. K.; Friedrichsen, Martin; Hellgren, Lars; Kadarmideen, Haja; Vaag, Allan; Nielsen, Mette O.

    In: PLoS ONE, Vol. 8, No. 6, 2013, p. e65452 .

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  85. Published
  86. Published

    Proteome Regulation during Olea europaea Fruit Development. / Bianco, Linda; Alagna, Fiammetta; Baldoni, Luciana; Finnie, Christine; Svensson, Birte; Perrotta, Gaetano.

    In: P L o S One, Vol. 8, No. 1, 2013, p. e53563.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  87. Published

    Pseudomonas aeruginosa adaptation to lungs of cystic fibrosis patients leads to lowered resistance to phage and protist enemies.. / Friman, Ville-Petri; Ghoul, Melanie; Molin, Søren; Johansen, Helle Krogh; Buckling, Angus.

    In: PloS one., Vol. 8, No. 9, 2013, p. e75380.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  88. Published
  89. Published

    Recombinant Production of Human Aquaporin-1 to an Exceptional High Membrane Density in Saccharomyces cerevisiae.. / Bomholt, Julie; Helix Nielsen, Claus; Scharff-Poulsen, Peter; Pedersen, Per Amstrup.

    In: PLoS ONE, Vol. 8, No. 2, 2013, p. 1-9.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  90. Published

    Residential Radon and Brain Tumour Incidence in a Danish Cohort. / Bräuner, Elvira V. ; Andersen, Zorana J. ; Andersen, Claus Erik; Pedersen, Camilla; Gravesen, Peter; Ulbak, Kaare; Hertel, Ole; Loft, Steffen; Raaschou-Nielsen, Ole.

    In: P L o S One, Vol. 8, No. 9, e74435, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  91. Published

    Ribbon Crystals. / Bohr, Jakob; Markvorsen, Steen.

    In: P L o S One, Vol. 8, No. 10, e74932, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  92. Published

    Saccharomyces cerevisiae–Based Platform for Rapid Production and Evaluation of Eukaryotic Nutrient Transporters and Transceptors for Biochemical Studies and Crystallography. / Scharff-Poulsen, Peter; Pedersen, Per Amstrup.

    In: P L o S One, Vol. 8, No. 10, e76851, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  93. Published

    SOX2 and OCT4 mRNA-Expressing Cells, Detected by Molecular Beacons, Localize to the Center of Neurospheres during Differentiation. / Ilieva, Mirolyuba; Dufva, Martin.

    In: PloS one., Vol. 8, No. 8, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  94. Published

    Spatial segregation within the spawning migration of North Eastern Atlantic mackerel (Scomber scombrus) as indicated by juvenile growth patterns. / Jansen, Teunis; Campbell, Andrew; Brunel, Thomas; Worsøe Clausen, Lotte.

    In: P L o S One, Vol. 8, No. 2, 2013, p. e58114.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  95. Published

    Stability mechanisms of a thermophilic laccase probed by molecular dynamics.. / Christensen, Niels Johan; Kepp, Kasper Planeta.

    In: P L o S One, Vol. 8, No. 4, 2013, p. e61985.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  96. Published

    Talaromyces atroroseus, a new species efficiently producing industrially relevant red pigments. / Frisvad, Jens Christian; Yilmaz, Neriman; Thrane, Ulf; Rasmussen, Kasper Bøwig; Houbraken, Jos; Samson, Robert A.

    In: P L o S One, Vol. 8, No. 12, e84102, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  97. Published

    The CIN4 chromosomal instability qPCR classifier defines tumor aneuploidy and stratifies outcome in grade 2 breast cancer.. / Szász, Attila Marcell; Li, Qiyuan; Eklund, Aron Charles; Sztupinszki, Zsófia; Rowan, Andrew; Tőkés, Anna-Mária; Székely, Borbála; Kiss, András; Szendrői, Miklós; Győrffy, Balázs; Szallasi, Zoltan Imre; Swanton, Charles; Kulka, Janina.

    In: PloS one., Vol. 8, No. 2, 2013, p. e56707.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  98. Published

    The putative thiosulfate sulfurtransferases PspE and GlpE contribute to virulence of Salmonella Typhimurium in the mouse model of systemic disease.. / Wallrodt, Inke; Jelsbak, Lotte; Thorndahl, Lotte; Thomsen, Line Elnif; Lemire, Sebastien; Olsen, John E.

    In: PLoS ONE, Vol. 8, No. 8, e70829, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  99. Published
  100. Published
  101. Published

    The Transcriptional and Gene Regulatory Network of Lactococcus lactis MG1363 during Growth in Milk. / de Jong, Anne; Hansen, Morten Ejby; Kuipers, Oscar P.; Kilstrup, Mogens; Kok, Jan.

    In: P L o S One, Vol. 8, No. 1, 2013, p. -.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  102. Published

    The Transcriptional Repressor TupA in Aspergillus niger Is Involved in Controlling Gene Expression Related to Cell Wall Biosynthesis, Development, and Nitrogen Source Availability.. / Schachtschabel, Doreen; Arentshorst, Mark; Nitsche, Benjamin M; Morris, Sam; Nielsen, Kristian Fog; van den Hondel, Cees A M J J; Klis, Frans M; Ram, Arthur F J.

    In: PloS one., Vol. 8, No. 10, 2013, p. e78102.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  103. Published

    Transcriptomic Analysis Reveals Novel Mechanistic Insight into Murine Biological Responses to Multi-Walled Carbon Nanotubes in Lungs and Cultured Lung Epithelial Cells. / Poulsen, Sarah Søs; Jacobsen, Nicklas R.; Labib, Sarah; Wu, Dongmei; Husain, Mainul; Williams, Andrew ; Bøgelund, Jesper P.; Andersen, Ole; Købler, Carsten; Mølhave, Kristian; Kyjovska, Zdenka O.; Saber, Anne T.; Wallin, Håkan; Yauk, Carole L.; Vogel, Ulla Birgitte; Halappanavar, Sabina.

    In: P L o S One, Vol. 8, No. 11, 2013, p. Article No.: e80452.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  104. Published

    Tumor Mutation Burden Forecasts Outcome in Ovarian Cancer with BRCA1 or BRCA2 Mutations. / Birkbak, Nicolai Juul; Kochupurakkal, Bose; Gonzalez-Izarzugaza, Jose Maria; Eklund, Aron Charles; Li, Yang; Liu, Joyce; Szallasi, Zoltan Imre; Matulonis, Ursula A. ; Richardson, Andrea L. ; Iglehart, J. Dirk ; Wang, Zhigang C.

    In: P L o S One, Vol. 8, No. 11, e80023, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  105. Published
  106. Published

    Whey protein reduces early life weight gain in mice fed a high-fat diet.. / Tranberg, Britt; Hellgren, Lars; Lykkesfeldt, Jens; Sejrsen, Kristen; Jeamet, Aymeric; Rune, Ida; Ellekilde, Merete; Nielsen, Dennis Sandris; Hansen, Axel Kornerup.

    In: PloS one., Vol. 8, No. 8, e71439, 2013.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  107. 2012
  108. [18F]FLT PET for non-invasive assessment of tumor sensitivity to chemotherapy: studies with experimental chemotherapy TP202377 in human cancer xenografts in mice. / Munk Jensen, Mette; Erichsen, Kamille Dumong; Björkling, Fredrik; Madsen, Jacob; Jensen, Peter Buhl; Sehested, Maxwell; Højgaard, Liselotte; Kjær, Andreas.

    In: P L o S One, Vol. 7, No. 11, 2012, p. e50618.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  109. Antibiotics Increase Gut Metabolism and Antioxidant Proteins and Decrease Acute Phase Response and Necrotizing Enterocolitis in Preterm Neonates. / Jiang, Pingping; Jensen, Michael Ladegaard; Cilieborg, Malene Skovsted; Thymann, Thomas; Wan, Jennifer Man-Fan; Sit, Wai-Hung; Tipoe, George L.; Sangild, Per Torp.

    In: P L o S One, Vol. 7, No. 9, 2012, p. e44929.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  110. Published

    Aspergillus bertholletius sp. nov. from Brazil Nuts. / Taniwaki, Marta H.; Pitt, John I.; Iamanaka, Beatriz T.; Sartori, Daniele; Copetti, Marina V.; Balajee, Arun; Fungaro, Maria Helena P.; Frisvad, Jens Christian.

    In: P L o S One, Vol. 7, No. 8, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  111. Published

    A Steered Molecular Dynamics Study of Binding and Translocation Processes in the GABA Transporter. / Skovstrup, Soren; David, Laurent; Taboureau, Olivier; Jorgensen, Flemming Steen.

    In: P L o S One, Vol. 7, No. 6, 2012, p. -.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  112. Published

    Automated Solid-Phase Subcloning Based on Beads Brought into Proximity by Magnetic Force. / Hudson, Elton P.; Nikoshkov, Andrej; Uhlén, Mathias; Rockberg, Johan.

    In: P L o S One, Vol. 7, No. 5, 2012, p. -.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  113. Published

    Baltic Salmon, Salmo salar, from Swedish River Lule Älv Is More Resistant to Furunculosis Compared to Rainbow Trout.. / Holten-Andersen, Lars; Dalsgaard, Inger; Buchmann, Kurt.

    In: P L o S One, Vol. 7, No. 1, 2012, p. e29571.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  114. Published

    Characterization of HIV-Specific CD4+T Cell Responses against Peptides Selected with Broad Population and Pathogen Coverage. / Buggert, Marcus; Norstrom, Melissa M.; Czarnecki, Chris; Tupin, Emmanuel; Luo, Ma; Gyllensten, Katarina; Sonnerborg, Anders; Lundegaard, Claus; Lund, Ole; Nielsen, Morten; Karlsson, Annika C.

    In: P L o S One, Vol. 7, No. 7, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  115. Published

    Common and Distant Structural Characteristics of Feruloyl Esterase Families from Aspergillus oryzae. / Udatha, D. B. R. K. Gupta; Mapelli, Valeria; Panagiotou, Gianni; Olsson, Lisbeth.

    In: P L o S One, Vol. 7, No. 6, 2012, p. e39473.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  116. Published

    Determining Vaccination Frequency in Farmed Rainbow Trout Using Vibrio anguillarum O1 Specific Serum Antibody Measurements. / Holten-Andersen, Lars; Dalsgaard, Inger; Nylén, Jørgen; Lorenzen, Niels; Buchmann, Kurt.

    In: P L o S One, Vol. 7, No. 11, 2012, p. e49672.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  117. Diagnosis of Bladder Cancer Recurrence Based on Urinary Levels of EOMES, HOXA9, POU4F2, TWIST1, VIM, and ZNF154 Hypermethylation. / Reinert, Thomas; Borre, Michael Skov; Christiansen, Anders; Hermann, Gregers; Orntoft, Torben F.; Dyrskjot, Lars.

    In: P L o S One, Vol. 7, No. 10, 2012, p. Article No.: e46297.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  118. Published
  119. Published

    Early detection of ecosystem regime shifts : A multiple method evaluation for management application. / Lindegren, Martin; Dakos, Vasilis; Groeger, Joachim P.; Gardmark, Anna; Kornilovs, Georgs; Otto, Saskia A.; Moellmann, Christian.

    In: PLoS ONE, Vol. 7, No. 7, 2012, p. e38410.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  120. Ecological determinants of highly pathogenic avian influenza (H5N1) outbreaks in Bangladesh. / Ahmed, Syed S. U.; Ersbøll, Annette K.; Biswas, Paritosh K.; Christensen, Jens P.; Hannan, Abu S. M. A.; Toft, Nils.

    In: P L o S One, Vol. 7, No. 3, e33938, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  121. Published

    Effects of hypoxic exposure during feeding on SDA and postprandial cardiovascular physiology in the Atlantic cod, Gadus morhua. / Behrens, Jane; Axelsson, Michael; Neuenfeldt, Stefan; Seth, Henrik.

    In: PLOS ONE, Vol. 7, No. 9, 2012, p. e46227.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  122. Published

    Efficient reverse transcription using locked nucleic acid nucleotides towards the evolution of nuclease resistant RNA aptamers.. / Crouzier, Lucile; Dubois, Camille; Edwards, Stacey L; Lauridsen, Lasse H; Wengel, Jesper; Veedu, Rakesh N.

    In: P L o S One, Vol. 7, No. 4, 2012, p. e35990.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  123. Published

    Fishery discards: Factors affecting their variability within a demersal trawl fishery. / Feekings, Jordan P.; Bartolino, Valerio; Madsen, Niels; Catchpole, Tom.

    In: PLoS ONE, Vol. 7, No. 4, 2012, p. e36409.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  124. Published
  125. Published

    Linking personality to larval energy reserves in rainbow trout (Oncorhynchus mykiss).. / Andersson, Madelene Åberg; Höglund, Erik.

    In: P L o S One, Vol. 7, No. 11, 2012, p. e49247.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  126. Published

    Long-term retrospective analysis of mackerel spawning in the North Sea : A new time series and modeling approach to CPR data. / Jansen, Teunis; Kristensen, Kasper; Payne, Mark; Edwards, Martin; Schrum, Corinna; Pitois, Sophie.

    In: PLoS ONE, Vol. 7, No. 6, 2012, p. Art. no. e38758.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  127. Published

    Migration and fisheries of North East Atlantic mackerel (Scomber scombrus) in autumn and winter. / Jansen, Teunis; Campbell, A.; Kelly, C.; Hatun, H.; Payne, Mark.

    In: PLOS ONE, Vol. 7, No. 12, 2012, p. e51541.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  128. Published

    Multiple kisspeptin receptors in early Osteichthyans provide new insights into the evolution of this receptor family. / Pasquier, J.; Lafont, A._G.; Jeng, S.-R.; Morini, M.; Dirks, R.; van den Thillart, G.; Tomkiewicz, Jonna; Tostivint, H.; Chang, C.-F.; Rousseau, K.; Dufour, S.

    In: PLoS ONE, Vol. 7, No. 11, 2012, p. Article number e48931.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  129. Natural Transformation of Campylobacter jejuni Occurs Beyond Limits of Growth. / Vegge, Christina S.; Brøndsted, Lone; Ligowska-Marzeta, Malgorzata Anna; Ingmer, Hanne.

    In: P L o S One, Vol. 7, No. 9, 2012, p. Article No.: e45467.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  130. Published

    Parallel Evolution under Chemotherapy Pressure in 29 Breast Cancer Cell Lines Results in Dissimilar Mechanisms of Resistance. / Tegze, Balint; Szallasi, Zoltan Imre; Haltrich, Iren; Penzvalto, Zsofia; Toth, Zsuzsa; Liko, Istvan; Gyoerffy, Balazs.

    In: P L o S One, Vol. 7, No. 2, 2012, p. e30804.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  131. Published

    Paraoxonase 1 Polymorphism and Prenatal Pesticide Exposure Associated with Adverse Cardiovascular Risk Profiles at School Age. / Andersen, Helle R.; Wohlfahrt-Veje, Christine; Dalgard, Christine; Christiansen, Lene; Main, Katharina M.; Nellemann, Christine Lydia; Murata, Katsuyuki; Jensen, Tina K.; Skakkebaek, Niels E.; Grandjean, Philippe.

    In: P L o S One, Vol. 7, No. 5, 2012, p. e36830.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  132. Published

    Phaeobacter gallaeciensis Reduces Vibrio anguillarum in Cultures of Microalgae and Rotifers, and Prevents Vibriosis in Cod Larvae. / D'Alvise, Paul; Lillebø, Siril; Prol García, María Jesús; Wergeland, Heidrun I; Nielsen, Kristian Fog; Bergh, Oivind; Gram, Lone.

    In: P L o S One, Vol. 7, No. 8, 2012, p. e43996.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  133. Published

    Polyamines Are Required for Virulence in Salmonella enterica Serovar Typhimurium. / Jelsbak, Lotte; Thomsen, Line Elnif; Wallrodt, Inke; Jensen, Peter Ruhdal; Olsen, John Elmerdahl.

    In: P L o S One, Vol. 7, No. 4, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  134. Published

    Potential Role of Specific Antibodies as Important Vaccine Induced Protective Mechanism against Aeromonas salmonicida in Rainbow Trout.. / Rømer Villumsen, Kasper; Dalsgaard, Inger; Holten-Andersen, Lars; Raida, Martin Kristian.

    In: P L o S One, Vol. 7, No. 10, 2012, p. e46733.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  135. Published

    Prey detection and prey capture in copepod nauplii. / Bruno, Eleonora; Borg, Marc Andersen; Kiørboe, Thomas.

    In: PLOS ONE, Vol. 7, No. 10, 2012, p. e47906.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  136. Published

    Rapid enzymatic response to UV stress in zooplankton. / Souza, M.S.; Hansson, L.-A.; Hylander, Samuel; Modenutti, B.; Balseiro, E.

    In: PLoS ONE, Vol. 7, No. 2, 2012, p. e32046.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  137. Published

    Rapid One-Step Selection Method for Generating Nucleic Acid Aptamers: Development of a DNA Aptamer against alpha-Bungarotoxin. / Lauridsen, Lasse Holm; Shamaileh, Hadi A.; Edwards, Stacey L.; Taran, Elena; Veedu, Rakesh N.

    In: P L o S One, Vol. 7, No. 7, 2012, p. e41702.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  138. Published

    Reconstruction of the Transmission History of RNA Virus Outbreaks Using Full Genome Sequences: Foot-and-Mouth Disease Virus in Bulgaria in 2011. / Valdazo-González, Begoña; Polihronova, Lilyana; Alexandrov, Tsviatko; Normann, Preben; Knowles, Nick J.; Hammond, Jef M.; Georgiev, Georgi K.; Ozyörük, Fuat; Sumption, Keith J.; Belsham, Graham; King, Donald P.

    In: P L o S One, Vol. 7, No. 11, 2012, p. e49650.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  139. Published

    Scale-free behaviour of amino acid pair interactions in folded proteins. / Petersen, Steffen B. ; Neves-Petersen, Maria Teresa; Mortensen, Rasmus J. ; Henriksen, Svend B. ; Geertz-Hansen, Henrik Marcus.

    In: P L o S One, Vol. 7, No. 7, 2012, p. e41322-e41322.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  140. Published

    Shark predation on migrating adult american eels (Anguilla rostrata) in the Gulf of St. Lawrence.. / Béguer-Pon, Mélanie; Benchetrit, José; Castonguay, Martin; Aarestrup, Kim; Campana, Steven E.; Stokesbury, Michael J. W.; Dodson, Julian J.

    In: P L o S One, Vol. 7, No. 10, 2012, p. 1.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  141. Published

    Simultaneous simulations of uptake in plants and leaching to groundwater of cadmium and lead for arable land amended with compost or farmyard manure.. / Legind, Charlotte Nielsen; Rein, Arno; Serre, Jeanne; Brochier, Violaine; Haudin, Claire-Sophie; Cambier, Philippe; Houot, Sabine; Trapp, Stefan.

    In: P L o S One, Vol. 7, No. 10, 2012, p. e47002.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  142. Published

    Single Nucleotide Polymorphisms in IL1B and the Risk of Acute Coronary Syndrome: A Danish Case-Cohort Study. / Stegger, Jakob Gerhard; Schmidt, Erik Berg; Tjonneland, Anne; Kopp, Tine Iskov; Sorensen, Thorkild I. A.; Vogel, Ulla; Overvad, Kim.

    In: P L o S One, Vol. 7, No. 6, 2012, p. e36829.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  143. Published

    SNP discovery using next generation transcriptomic sequencing in Atlantic herring (Clupea harengus). / Helyar, Sarah J; Limborg, Morten; Bekkevold, Dorte; Babbucci, Massimiliano; van Houdt, Jeroen; Maes, Gregory E; Bargelloni, Luca; Nielsen, Rasmus O.; Taylor, Martin I; Ogden, Rob; Cariani, Alessia; Carvalho, Gary R; Consortium, Fishpoptrace; Panitz, Frank.

    In: PLOS ONE, Vol. 7, No. 8, 2012, p. e42089.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  144. Published

    Spawning of bluefin tuna in the black sea: historical evidence, environmental constraints and population plasticity. / Mackenzie, Brian R; Mariani, Patrizio.

    In: PLoS ONE, Vol. 7, No. 7, 2012, p. e39998.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  145. Published

    Synthesis and Antiangiogenic Activity of N-Alkylated Levamisole Derivatives. / Hansen, Anders N.; Bendiksen, Christine D.; Sylvest, Lene; Friis, Tina; Staerk, Dan; Jorgensen, Flemming Steen; Olsen, Christian A.; Houen, Gunnar.

    In: P L o S One, Vol. 7, No. 9, 2012, p. Article No.: e45405.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  146. Published
  147. Published

    The effect of selected synbiotics on microbial composition and short-chain Fatty Acid production in a model system of the human colon.. / van Zanten, Gabriella C; Knudsen, Anne; Röytiö, Henna; Forssten, Sofia; Lawther, Mark; Blennow, Per Gunnar Andreas; Lahtinen, Sampo J; Jakobsen, Mogens; Svensson, Birte; Jespersen, Lene.

    In: P L o S One, Vol. 7, No. 10, 2012, p. e47212.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  148. Published

    The kinematics of swimming and relocation jumps in copepod nauplii. / Borg, Marc Andersen; Bruno, Eleonora; Kiørboe, Thomas.

    In: PLOS ONE, Vol. 7, No. 10, 2012, p. e47486.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  149. The Proteasome System in Infection: Impact of β5 and LMP7 on Composition, Maturation and Quantity of Active Proteasome Complexes.. / Joeris, Thorsten; Schmidt, Nicole; Ermert, David; Krienke, Petra; Visekruna, Alexander; Kuckelkorn, Ulrike; Kaufmann, Stefan H. E.; Steinhoff, Ulrich.

    In: PLoS ONE, Vol. 7, No. 6, e39827, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  150. Published

    The Transcriptional Heat Shock Response of Salmonella Typhimurium Shows Hysteresis and Heated Cells Show Increased Resistance to Heat and Acid Stress. / Pin, C.; Hansen, Trine; Munoz-Cuevas, M.; de Jonge, R.; Rosenkrantz, J. T.; Löfström, Charlotta; Aarts, H.; Olsen, J. E.

    In: P L o S One, Vol. 7, No. 12, 2012, p. e51196.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  151. Three-Dimensional Imaging of Prox1-EGFP Transgenic Mouse Gonads Reveals Divergent Modes of Lymphangiogenesis in the Testis and Ovary. / François, Mathias; Koopman, Peter; Wilhelm, Dagmar; Svingen, Terje.

    In: PLoS ONE, Vol. 7, No. 12, e52620, 2012.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  152. Published

    TLR2 Controls Intestinal Carcinogen Detoxication by CYP1A1.. / Do, Khoa; Fink, Lisbeth Nielsen; Jensen, Thomas Elbenhardt; Gautier, Laurent; Parlesak, Alexandr.

    In: P L o S One, Vol. 7, No. 3, 2012, p. e32309.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  153. Published

    Transcriptional Analysis of Prebiotic Uptake and Catabolism by Lactobacillus acidophilus NCFM.. / Andersen, Joakim Mark; Barrangou, Rodolphe; Abou Hachem, Maher ; Lahtinen, Sampo J; Goh, Yong-Jun; Svensson, Birte; Klaenhammer, Todd R.

    In: P L o S One, Vol. 7, No. 9, 2012, p. e44409.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  154. Published
  155. Published

    Uncovering the Molecular Machinery of the Human Spindle-An Integration of Wet and Dry Systems Biology. / Rojas, Ana M.; Santamaria, Anna; Malik, Rainer; Jensen, Thomas Skot; Korner, Roman; Morilla, Ian; de Juan, David; Krallinger, Martin; Hansen, Daniel Aaen; Hoffmann, Robert Daniel; Lees, Jonathan; Reid, Adam; Yeats, Corin; Wehner, Anja; Elowe, Sabine; Clegg, Andrew B.; Brunak, Soren; Nigg, Erich A.; Orengo, Christine; Valencia, Alfonso; Ranea, Juan A. G.

    In: P L o S One, Vol. 7, No. 3, 2012, p. e31813.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  156. 2011
  157. Published

    Could seals prevent cod recovery in the Baltic Sea?. / MacKenzie, Brian; Eero, Margit; Ojaveer, Henn.

    In: PLoS ONE, Vol. 6, No. 5, 09.05.2011, p. e18998.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  158. Published

    Bacillus subtilis Two-Component System Sensory Kinase DegS Is Regulated by Serine Phosphorylation in Its Input Domain. / Jers, Carsten; Kobir, Ahasanul; Søndergaard, Elsebeth Oline; Jensen, Peter Ruhdal; Mijakovic, Ivan.

    In: P L o S One, Vol. 6, No. 2, 2011, p. e14653.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  159. Published

    Bioinformatics-Driven Identification and Examination of Candidate Genes for Non-Alcoholic Fatty Liver Disease. / Banasik, Karina; Justesen, Johanne M.; Hornbak, Malene; Krarup, Nikolaj T.; Gjesing, Anette P.; Sandholt, Camilla H.; Jensen, Thomas Skøt; Grarup, Niels; Andersson, Åsa; Jørgensen, Torben; Witte, Daniel R.; Sandbaek, Annelli; Lauritzen, Torsten; Thorens, Bernard; Brunak, Søren; Sørensen, Thorkild I. A.; Pedersen, Oluf; Hansen, Torben.

    In: P L o S One, Vol. 6, No. 1, 2011, p. e16542.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  160. CAF01 Potentiates Immune Responses and Efficacy of an Inactivated Influenza Vaccine in Ferrets. / Martel, Cyril Jean-Marie; Agger, Else Marie; Poulsen, Julie Juul; Jensen, Trine Hammer; Andresen, Lars; Christensen, Dennis; Nielsen, Lars Peter; Blixenkrone-Moller, Merete; Andersen, Peter; Aasted, Bent.

    In: PLOS ONE, Vol. 6, No. 8, e22891, 2011.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  161. Published

    Characterization of Salmonella Occurring at High Prevalence in a Population of the Land Iguana Conolophus subcristatus in Galapagos Islands, Ecuador. / Franco, Alessia; Hendriksen, Rene S.; Lorenzetti, Serena; Onorati, Roberta; Gentile, Gabriele; Dell'Omo, Giacomo; Aarestrup, Frank Møller; Battisti, Antonio.

    In: P L o S One, Vol. 6, No. 8, 2011, p. -.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  162. Dengue Virus Activates Polyreactive, Natural IgG B Cells After Primary and Secondary Infection. / Balakrishnan, Thavamalar; Bela-Ong, Dennis; Toh, Ying Xiu; Flamand, Marie; Devi, Shamala; Koh, Mickey B.; Hibberd, Martin L.; Ooi, Eng Eong; Low, Jenny G.; Leo, Yee Sin; Gu, Feng; Fink, Katja.

    In: P L o S One, Vol. 6, No. 12, 2011, p. 1-12.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  163. Establishment of normal gut microbiota is compromised under excessive hygiene conditions.. / Schmidt, Bettina; Mulder, Imke E; Musk, Corran C; Aminov, Rustam; Lewis, Marie; Stokes, Christopher R; Bailey, Mick; Prosser, James I; Gill, Bhupinder P; Pluske, John R; Kelly, Denise.

    In: PloS one., Vol. 6, No. 12, e28284, 2011.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  164. Published

    Evolution and Adaptation in Pseudomonas aeruginosa Biofilms Driven by Mismatch Repair System-Deficient Mutators. / Luján, Adela M.; Maciá, María D.; Yang, Liang; Molin, Søren; Oliver, Antonio; Smania, Andrea M.

    In: P L o S One, Vol. 6, No. 11, 2011, p. e27842.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  165. Published

    Expression of Enzymatically Inactive Wasp Venom Phospholipase A1 in Pichia pastoris. / Borodina, Irina; Jensen, Bettina M.; Wagner, Tim; Abou Hachem, Maher; Søndergaard, Ib; Poulsen, Lars Kærgaard.

    In: P L o S One, Vol. 6, No. 6, 2011, p. e21267.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  166. Published

    Four regional marine biodiversity studies: Approaches and contributions to ecosystem-based management. / Ellis, Sara L.; Incze, Lewis S.; Lawton, Peter; Ojaveer, Henn; MacKenzie, Brian; Pitcher, Roland C.; Shirley, Thomas C.; Eero, Margit; Tunnell, John W. Jr.; Doherty, Peter J.; Zeller, Brad M.

    In: PLoS ONE, Vol. 6, No. 4, 2011, p. e18997.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  167. Published

    Fumonisin and Ochratoxin Production in Industrial Aspergillus niger Strains. / Frisvad, Jens Christian; Larsen, Thomas Ostenfeld; Thrane, Ulf; Meijer, Martin; Varga, Janos; Samson, Robert A.; Nielsen, Kristian Fog.

    In: P L o S One, Vol. 6, No. 8, 2011, p. e23496.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  168. Published

    Human Leukocyte Antigen (HLA) Class I Restricted Epitope Discovery in Yellow Fewer and Dengue Viruses: Importance of HLA Binding Strength.. / Lund, Ole; Nascimento, Eduardo J. M.; Maciel, Milton, Jr; Nielsen, Morten; Larsen, Mette Voldby; Lundegaard, Claus; Harndahl, Mikkel; Lamberth, Kasper; Buus, Søren; Salmon, Jérôme; August, Thomas J.; Marques, Ernesto T A, Jr.

    In: P L o S One, Vol. 6, No. 10, 2011, p. e26494.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  169. Published

    Identification of Novel Functional Inhibitors of Acid Sphingomyelinase. / Kornhuber, Johannes; Muehlbacher, Markus; Trapp, Stefan; Pechmann, Stefanie; Friedl, Astrid; Reichel, Martin; Muehle, Christiane; Terfloth, Lothar; Groemer, Teja W.; Spitzer, Gudrun M.; Liedl, Klaus R.; Gulbins, Erich; Tripal, Philipp.

    In: P L o S One, Vol. 6, No. 8, 2011, p. e23852.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  170. Published

    Image Analysis of Pellet Size for a Control System in Industrial Feed Production. / Ljungqvist, Martin Georg; Nielsen, Michael Engelbrecht; Ersbøll, Bjarne Kjær; Frosch, Stina.

    In: P L o S One, Vol. 6, No. 10, 2011, p. e26492.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  171. Published

    Investigation of Parameters that Affect the Success Rate of Microarray-Based Allele-Specific Hybridization Assays. / Poulsen, Lena; Søe, Martin Jensen; Moller, Lisbeth Birk; Dufva, Martin.

    In: P L o S One, Vol. 6, No. 3, 2011, p. e14777.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  172. Published

    Linking fearfulness and coping styles in fish. / Martins, Catarina I.M.; Silva, Patricia I.M.; Conceicao, Luis E.C.; Costas, Benjamin; Höglund, Erik; Øverli, Øyvind; Schrama, Johan W.

    In: PLoS ONE, Vol. 6, No. 11, 2011, p. Art. no. e28084.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  173. Published

    Linking Genotype and Phenotype of Saccharomyces cerevisiae Strains Reveals Metabolic Engineering Targets and Leads to Triterpene Hyper-Producers. / Madsen, Karina Marie; Udatha, Gupta D. B. R. K.; Semba, Saori; Otero, Jose M.; Koetter, Peter; Nielsen, Jens; Ebizuka, Yutaka; Kushiro, Tetsuo; Panagiotou, Gianni.

    In: P L o S One, Vol. 6, No. 3, 2011, p. e14763.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  174. Published

    Methodological challenges in assessing the environmental status of a marine ecosystem: Case study of the Baltic Sea. / Ojaveer, Henn; Eero, Margit.

    In: PLoS ONE, Vol. 6, No. 4, 2011, p. e19231.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  175. Published

    MMP Mediated Degradation of Type VI Collagen Is Highly Associated with Liver Fibrosis - Identification and Validation of a Novel Biochemical Marker Assay. / Veidal, Sanne Skovgard; Karsdal, Morten Asser; Vassiliadis, Efstathios; Nawrocki, Arkadiusz; Larsen, Martin Rossel; Quoc, HTN; Hägglund, Per; Luo, Yunyun; Zheng, Qinlong; Vainer, Ben; Leeming, Diana Julie.

    In: P L o S One, Vol. 6, No. 9, 2011, p. e24753.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  176. Published

    Multispectral Imaging for Determination of Astaxanthin Concentration in Salmonids. / Dissing, Bjørn Skovlund; Nielsen, Michael Engelbrecht; Ersbøll, Bjarne Kjær; Frosch, Stina.

    In: P L o S One, Vol. 6, No. 5, 2011, p. e19032.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  177. Published

    NNAlign: A Web-Based Prediction Method Allowing Non-Expert End-User Discovery of Sequence Motifs in Quantitative Peptide Data. / Andreatta, Massimo; Schafer-Nielsen, Claus; Lund, Ole; Buus, Søren; Nielsen, Morten.

    In: P L o S One, Vol. 6, No. 11, 2011, p. e26781.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  178. Published

    Optimal Homogenization of Perfusion Flows in Microfluidic Bio-Reactors: A Numerical Study. / Okkels, Fridolin; Dufva, Martin; Bruus, Henrik.

    In: P L o S One, Vol. 6, No. 1, 2011, p. e14574.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  179. Published

    Oxygen sensitivity of anammox and coupled N-cycle processes in oxygen minimum zones. / Kalvelage, Tim; Jensen, Marlene Mark; Contreras, Sergio; Revsbech, Niels Peter; Lam, Phyllis; Günter, Marcel; LaRoche, Julie; Lavik, Gaute; Kuypers, Marcel M. M.

    In: P L o S One, Vol. 6, No. 12, 2011, p. e29299.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  180. Perceiving a stranger's voice as being one's own: a 'rubber voice' illusion?. / Zheng, Zane Z; MacDonald, Ewen; Munhall, Kevin G; Johnsrude, Ingrid S.

    In: P L o S One, Vol. 6, No. 4, 2011, p. e18655.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  181. Published

    Phenotypes of Non-Attached Pseudomonas aeruginosa Aggregates Resemble Surface Attached Biofilm. / Alhede, Morten; Kragh, Kasper Nørskov; Qvortrup, Klaus; Allesen-Holm, Marie; van Gennip, Maria; Christensen, Louise D.; Jensen, Peter Østrup; Nielsen, Anne K.; Parsek, Matt; Wozniak, Dan; Molin, Søren; Tolker-Nielsen, Tim; Høiby, Niels; Givskov, Michael; Bjarnsholt, Thomas.

    In: P L o S One, Vol. 6, No. 11, 2011, p. e27943.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  182. Published

    Pop up satellite tags impair swimming performance and energetics of the European eel (Anguilla anguilla). / Methling, Caroline; Tudorache, Christian; Skov, Peter Vilhelm; Steffensen, John Fleng.

    In: PLoS ONE, Vol. 6, No. 6, 2011, p. e20797.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  183. Published
  184. Restricting Microbial Exposure in Early Life Negates the Immune Benefits Associated with Gut Colonization in Environments of High Microbial Diversity. / Mulder, Imke E.; Schmidt, Bettina; Lewis, Marie; Delday, Margaret; Stokes, Christopher R.; Bailey, Mick; Aminov, Rustam; Gill, Bhupinder P.; Pluske, John R.; Mayer, Claus-Dieter; Kelly, Denise.

    In: P L o S One, Vol. 6, No. 12, e28279, 2011.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  185. Published

    Salinity gradient of the Baltic Sea limits the reproduction and population expansion of the newly invaded comb jelly Mnemiopsis leidyi. / Jaspers, Cornelia; Møller, Lene Friis; Kiørboe, Thomas.

    In: PLoS ONE, Vol. 6, No. 8, 2011, p. e24065.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  186. Published

    Senescence and sexual selection in a pelagic copepod. / Ceballos, Sara; Kiørboe, Thomas.

    In: PLoS ONE, Vol. 6, No. 4, 2011, p. e18870.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  187. Published

    Shedding light on fish otolith biomineralization using a bioenergetic approach. / Fablet, R.; Pecquerie, L.; de Pontual, H.; Høie, H.; Millner, R.; Mosegaard, Henrik; Sebastiaan, A.; Kooijman, S.A.L.M.

    In: PLoS ONE, Vol. 6, No. 11, 2011, p. art. no. e27055.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  188. Spatio-temporal magnitude and direction of highly pathogenic avian influenza (H5N1) outbreaks in Bangladesh. / Ahmed, Syed S. U.; Ersbøll, Annette K.; Biswas, Paritosh K.; Christensen, Jens P.; Toft, Nils.

    In: P L o S One, Vol. 6, No. 9, e24324, 2011.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  189. Published

    Stable isotope evidence for late medieval (14th-15th C) origins of the eastern Baltic cod (Gadus morhua) fishery. / Orton, D.C.; Makowiecki, D.; de Roo, T.; Johnstone, C.; Harland, J.; Jonsson, L.; Heinrich, D.; Enghoff, I.B.; Lougas, L.; van Neer, W.; Ervynck, A.; Hufthammer, A.K.; Amundsen, C.; Jones, A.K.G.; Locker, A.; Hamilton-Dyer, S.; Pope, P.; MacKenzie, Brian; Richards, M.; O'Connell, T.C.; Barrett, J.H.

    In: PLoS ONE, Vol. 6, No. 11, 2011, p. art. no. e27568.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  190. Published

    Structure and Stability of the Spinach Aquaporin SoPIP2;1 in Detergent Micelles and Lipid Membranes. / Plasencia, Ines; Survery, Sabeen; Ibragimova, Sania; Hansen, Jesper Søndergaard; Kjellbom, Per; Helix Nielsen, Claus; Johanson, Urban; Mouritsen, Ole G.

    In: P L o S One, Vol. 6, No. 2, 2011, p. e14674.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  191. Published

    The Gut as Reservoir of Antibiotic Resistance: Microbial Diversity of Tetracycline Resistance in Mother and Infant. / de Vries, Lisbeth Elvira; Valles, Yvonne; Agersø, Yvonne; Vaishampayan, Parag A.; Garcia-Montaner, Andrea; Kuehl, Jennifer V.; Christensen, Henrik; Barlow, Miriam; Francino, M. Pilar.

    In: P L o S One, Vol. 6, No. 6, e21644, 2011.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  192. Published

    Thioredoxin 80-Activated-Monocytes (TAMs) Inhibit the Replication of Intracellular Pathogens. / Cortes-Bratti, Ximena; Brasseres, Eugenie; Herrera-Rodriquez, Fabiola; Botero-Kleiven, Silvia; Coppotelli, Giuseppe; Andersen, Jens Bo; G. Masucci, Maria; Holmgren, Arne; Chaves-Olarte, Esteban; Frisan, Teresa; Avila-Carino, Javier.

    In: P L o S One, Vol. 6, No. 2, 2011.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  193. Variation in NOD2 Augments Th2-and Th17 Responses to Myelin Basic Protein in Multiple Sclerosis. / Hedegaard, Chris Juul; Enevold, Christian; Sellebjerg, Finn ; Bendtzen, Klaus; Nielsen, Claus Henrik.

    In: P L o S One, Vol. 6, No. 5, 2011, p. e20253.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  194. Published

    Vesicular Stomatitis Virus Infection Promotes Immune Evasion by Preventing NKG2D-Ligand Surface Expression. / Jensen, Helle; Andresen, Lars; Nielsen, Jens; Christensen, Jan Pravsgaard; Skov, Søren.

    In: P L o S One, Vol. 6, No. 8, 2011, p. e23023.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  195. 2010
  196. An Incomplete TCA Cycle Increases Survival of Salmonella Typhimurium during Infection of Resting and Activated Murine Macrophages. / Bowden, Steven D.; Ramachandran, Vinoy K.; Knudsen, Gitte Maegaard; Hinton, Jay C. D.; Thompson, Arthur.

    In: P L o S One, Vol. 5, No. 11, 2010, p. e13871.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  197. Published
  198. Published
  199. Published

    Computational Immunology Meets Bioinformatics: The Use of Prediction Tools for Molecular Binding in the Simulation of the Immune System. / Rapin, N.; Lund, Ole; Bernaschi, M.; Castiglione, F.

    In: P L o S One, Vol. 5, No. 4, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  200. Published

    Equitoxic Doses of 5-Azacytidine and 5-Aza-2 ′ Deoxycytidine Induce Diverse Immediate and Overlapping Heritable Changes in the Transcriptome. / Qiu, X.; Hother, C.; Ralfkiær, U. M.; Søgaard, A.; Lu, Q.; Workman, Christopher; Liang, G.; Jones, P.A.; Grønbæk, K.

    In: P L o S One, Vol. 5, No. 9, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  201. Published

    Fibroblasts Express Immune Relevant Genes and Are Important Sentinel Cells during Tissue Damage in Rainbow Trout (Oncorhynchus mykiss). / Ingerslev, Hans-Christian; Ossum, Carlo Gunnar; Lindenstrom, Thomas; Nielsen, Michael Engelbrecht.

    In: P L o S One, Vol. 5, No. 2, 2010, p. e9304.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  202. Published

    Genomic Characterization of Campylobacter jejuni strain M1. / Friis, Carsten; Wassenaar, Gertrude Maria; Javed, Muhammad A.; Snipen, Lars; Lagesen, Karin; Hallin, Peter Fischer; Newell, Diane G.; Toszeghy, Monique; Ridley, Anne; Manning, Georgia; Ussery, David.

    In: P L o S One, Vol. 5, No. 8, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  203. Published

    HLA Class I Binding 9mer Peptides from Influenza A Virus Induce CD4(+) T Cell Responses. / Wang, M. J.; Larsen, Mette Voldby; Nielsen, Morten; Harndahl, M.; Justesen, S.; Dziegiel, M.H.; Buus, S.; Tang, Sheila Tuyet; Lund, Ole; Claesson, M.H.

    In: P L o S One, Vol. 5, No. 5, 2010, p. e10533.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  204. Published

    Identification of CD8(+) T Cell Epitopes in the West Nile Virus Polyprotein by Reverse-Immunology Using NetCTL. / Larsen, Mette Voldby; Lelic, A.; Parsons, R.; Nielsen, Morten; Hoof, I.; Lamberth, K.; Loeb, M.B.; Buus, S.; Bramson, J.; Lund, Ole.

    In: P L o S One, Vol. 5, No. 9, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  205. Published

    Insight into Antigenic Diversity of VAR2CSA-DBL5 epsilon Domain from Multiple Plasmodium falciparum Placental Isolates. / Gnidehou, Sedami; Jessen, Leon Ivar; Gangnard, Stephane; Ermont, Caroline; Triqui, CHoukri; Quiviger, Mickael; Guitard, Juliette; Lund, Ole; Deloron, Philippe; Ndam, Nicaise Tuikue.

    In: P L o S One, Vol. 5, No. 10, 2010, p. e13105.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  206. Published

    In Silico Prediction of Human Pathogenicity in the gamma-Proteobacteria. / Andreatta, Massimo; Nielsen, Morten; Aarestrup, Frank Møller; Lund, Ole.

    In: P L o S One, Vol. 5, No. 10, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  207. Published

    Lazarus1, a DUF300 Protein, Contributes to Programmed Cell Death Associated with Arabidopsis acd11 and the Hypersensitive Response. / Malinovsky, F.G.; Brodersen, P.; Fiil, B.K.; McKinney, L.V.; Thorgrimsen, S.; Beck, M.; Nielsen, Henrik Bjørn; Pietra, S.; Zipfel, C.; Robatzek, S.; Petersen, M.; Hofius, D.; Mundy, J.

    In: P L o S One, Vol. 5, No. 9, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  208. Published

    Limitations of Ab Initio Predictions of Peptide Binding to MHC Class II Molecules. / Zhang, Hao; Lund, Ole; Nielsen, Morten; Wang, P; Papangelopoulos, N; Xu, Y; Sette, A; Bourne, PE; Ponomarenko, J; Peters, B.

    In: P L o S One, Vol. 5, No. 2, 2010, p. e9272.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  209. Metagenomes from High-Temperature Chemotrophic Systems Reveal Geochemical Controls on Microbial Community Structure and Function. / Inskeep, William P.; Rusch, Douglas B.; Jay, Zackary J.; Herrgard, Markus J.; Kozubal, Mark A.; Richardson, Toby H.; Macur, Richard E.; Hamamura, Natsuko; Jennings, Ryan deM.; Fouke, Bruce W.; Reysenbach, Anna-Louise; Roberto, Frank; Young, Mark; Schwartz, Ariel; Boyd, Eric S.; Badger, Jonathan H.; Mathur, Eric J.; Ortmann, Alice C.; Bateson, Mary; Geesey, Gill; Frazier, Marvin.

    In: P L o S One, Vol. 5, No. 3, 2010, p. Article No.: e9773.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  210. Published

    Minimising Immunohistochemical False Negative ER Classification Using a Complementary 23 Gene Expression Signature of ER Status. / Li, Qiyuan; Eklund, Aron Charles; Birkbak, Nicolai Juul; Haibe-Kains, B.; Workman, Christopher; Richardson, A.L.; Szallasi, Zoltan Imre; Swanton, C.

    In: P L o S One, Vol. 5, No. 12, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  211. Published
  212. Published

    Non-invasive bleaching of the human lens by femtosecond laser photolysis. / Kessel, L.; Eskildsen, Lars; Poel, Mike van der; Larsen, M.

    In: P L o S One, Vol. 5, No. 3, 2010, p. e9711.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  213. On the Mechanism of Chloroquine Resistance in Plasmodium falciparum. / Chinappi, Mauro; Via, Allegra; Marcatili, Paolo; Tramontano, Anna.

    In: P L o S One, Vol. 5, No. 11, e14064, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  214. Published

    Quorum Sensing and Virulence of Pseudomonas aeruginosa during Lung Infection of Cystic Fibrosis Patients. / Bjarnsholt, T.; Jensen, P.O.; Jakobsen, T.H.; Phipps, Richard Kerry; Nielsen, A.K.; Rybtke, M.T.; Tolker-Nielsen, T.; Givskov, M.; Hoiby, N.; Ciofu, O.

    In: P L o S One, Vol. 5, No. 4, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  215. Published

    Replication, Pathogenesis and Transmission of Pandemic (H1N1) 2009 Virus in Non-Immune Pigs. / Brookes, Sharon M; Nunez, Alejandor; Choudhury, Bhudipa; Matrosovich, Mikhail; Essen, Stephen C; Clifford, Derek; Slomka, Marek J; Kuntz-Simon, Gaélle; Garcon, Fanny; Nash, Bethany; Hanna, Amanda; Heegaard, Peter M. H.; Queguiner, Stéphane; Bublot, Michel; Garcia, Jaime Maldonado; Gardner, Rebecca; Foni, Emanuela; Loeffen, Willie; Larsen, Lars Erik; Reeth, Kristien Van; Banks, Jill; Irvine, Richard M.; Brown, Ian H.

    In: P L o S One, Vol. 5, No. 2, 2010, p. 1 - 9.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  216. Published

    Status of biodiversity in the Baltic Sea. / Ojaveer, Henn; Jaanus, Andres; MacKenzie, Brian; Martin, Georg; Olenin, Sergej; Radziejewska, Teresa; Telesh, Irena; Zettler, Michael L.; Zaiko, Anastasija.

    In: PLOS ONE, Vol. 5, No. 9, 2010, p. e12467.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  217. Published

    Structural Properties of MHC Class II Ligands, Implications for the Prediction of MHC Class II Epitopes. / Jørgensen, Kasper Winther; Buus, Søren; Nielsen, Morten.

    In: P L o S One, Vol. 5, No. 12, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  218. Published

    The Type 1 Diabetes - HLA Susceptibility Interactome - Identification of HLA Genotype-Specific Disease Genes for Type 1 Diabetes. / Brorsson, C.; Hansen, Niclas Tue; Bergholdt, R.; Brunak, Søren; Pociot, F.

    In: P L o S One, Vol. 5, No. 3, 2010, p. e9576.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  219. Published

    Yeast Biological Networks Unfold the Interplay of Antioxidants, Genome and Phenotype, and Reveal a Novel Regulator of the Oxidative Stress Response. / Otero, José Manuel; Papadakis, M.A.; Udatha, D.B.R.K.G.; Nielsen, J.; Panagiotou, Gianni.

    In: P L o S One, Vol. 5, No. 10, 2010.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  220. 2009
  221. Published

    Comparative Pathogenesis of an Avian H5N2 and a Swine H1N1 Influenza Virus in Pigs. / De Vleeschauwer, Annebel; Atanasova, Kalina; Van Borm, Steven; van den Berg, Thierry; Rasmussen, Thomas Bruun; Uttenthal, Åse; Van Reeth, Kristien.

    In: P L o S One, Vol. 4, No. 8, 2009, p. e6662.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  222. Published

    Evaluation of Microarray Preprocessing Algorithms Based on Concordance with RT-PCR in Clinical Samples. / Hansen, Kasper Lage; Szallasi, Zoltan Imre; Eklund, Aron Charles; Gyorffy, B; Molnar, B.

    In: P L o S One, Vol. 4, No. 5, 2009, p. e5645.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  223. Published

    Expression Profiling of Human Genetic and Protein Interaction Networks in Type 1 Diabetes. / Brunak, Søren; Bergholdt, R; Brorsson, C; Nielsen, JH; Pociot, F; Hansen, Kasper Lage.

    In: P L o S One, Vol. 4, No. 7, 2009, p. e6250.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  224. Published

    Fatness-Associated FTO Gene Variant Increases Mortality Independent of Fatness - in Cohorts of Danish Men. / Zimmermann, E; Kring, SI; Berentzen, TL; Holst, C; Pers, Tune Hannes; Hansen, T; Pedersen, O; Sørensen, TI; Jess, T.

    In: P L o S One, Vol. 4, No. 2, 2009, p. e4428.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  225. Published

    Similarity measures for protein ensembles. / Lindorff-Larsen, Kresten; Ferkinghoff-Borg, Jesper.

    In: PLoS ONE, Vol. 4, No. 1, 2009, p. e4203.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  226. Published
  227. Published

    The Type 2 Diabetes Associated Minor Allele of rs2237895 KCNQ1 Associates with Reduced Insulin Release Following an Oral Glucose Load. / Brunak, Søren; Holmkvist, J; Banasik, K; Andersen, G; Unoki, H; Jensen, Thomas Skøt; Pisinger, C; Borch-Johnsen, K; Sandbaek, A; Lauritzen, T; Maeda, S; Hansen, T; Pedersen, O.

    In: P L o S One, Vol. 4, No. 6, 2009, p. e5872.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  228. Published

    The validation and assessment of machine learning: a game of prediction from high-dimensional data. / Pers, Tune Hannes; Albrechtsen, A; Holst, C; Sørensen, TI; Gerds, TA.

    In: P L o S One, Vol. 4, No. 8, 2009.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  229. 2008
  230. Published

    Amino acid similarity accounts for T cell cross-reactivity and for "holes" in the T cell repertoire. / Pletscher-Frankild, Sune; de Boer, Rob J.; Lund, Ole; Nielsen, Morten; Kesmir, Can.

    In: PLoS ONE, Vol. 3, No. 3, 2008, p. e1831.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  231. Published

    Biofilm Induced Tolerance Towards Antimicrobial Peptides. / Folkesson, Anders; Haagensen, Janus Anders Juul; Zampaloni, Claudia; Sternberg, Claus; Molin, Søren.

    In: PL o S One, Vol. 3, No. 4, 2008, p. e1891.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  232. Published

    DnaC inactivation in Escherichia coli K-12 induces the SOS response and expression of nucleotide biosynthesis genes.. / Løbner-Olesen, Anders; Slominska-Wojewodzka, Monika; Hansen, Flemming G.; Marinus, Martin G.

    In: P L o S One, Vol. 3, No. 8, 2008, p. e2984.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  233. Elevated Systemic Antibodies towards Commensal Gut Microbiota in Autoinflammatory Condition. / Manukyan, Gayane P.; Ghazaryan, Karine A.; Ktsoyan, Zhanna A.; Khachatryan, Zaruhi A.; Arakelova, Karine A.; Kelly, Denise; Grant, George; Aminov, Rustam.

    In: PLOS ONE, Vol. 3, No. 9, e3172, 2008.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  234. Published

    Optimal swimming speed in head currents and effects on distance movement of winter-migrating fish. / Brodersen, J.; Nilsson, P.A.; Ammitzbøl, J.; Hansson, L.A.; Skov, Christian; Brönmark, C.

    In: PLoS ONE, Vol. 3, No. 5, 2008, p. 1-7.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  235. Predominant Role of Host Genetics in Controlling the Composition of Gut Microbiota. / Khachatryan, Zaruhi A.; Ktsoyan, Zhanna A.; Manukyan, Gayane P.; Kelly, Denise; Ghazaryan, Karine A.; Aminov, Rustam.

    In: P L o S One, Vol. 3, No. 8, e3064, 2008.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  236. Published

    Seasonal migration determined by a trade-off between predator avoidance and growth. / Brönmark, C.; Skov, Christian; Brodersen, J.; Nilsson, P.A.; Hansson, L.A.

    In: PLoS ONE, Vol. 3, No. 4, 2008, p. 1-6.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  237. Published
  238. Published

    Tyrosine Phosphorylation of the UDP-Glucose Dehydrogenase of Escherichia coli Is at the Crossroads of Colanic Acid Synthesis and Polymyxin Resistance. / Lacour, S.; Bechet, E.; Cozzone, A.J.; Mijakovic, Ivan; Grangeasse, C.

    In: P L o S One, Vol. 3, No. 8, 2008.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  239. When the genome plays dice: Circumvention of the spindle assembly checkpoint and near-random chromosome segregation in multipolar cancer cell mitoses. / Gisselsson, David; Håkanson, Ulf; Stoller, Patrick; Marti, Dominik; Jin, Yuesheng; Rosengren, Anders H.; Stewénius, Ylva; Kahl, Fredrik; Panagopoulos, Ioannis.

    In: PLoS ONE, Vol. 3, No. 4, e1871, 2008.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  240. 2007
  241. Published

    Functional Associations by Response Overlap (FARO), a functional genomics approach matching gene expression phenotypes. / Nielsen, Henrik Bjørn; Mundy, J.; Willenbrock, Hanni.

    In: PLoS ONE, No. 7, 2007, p. 676.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  242. Published

    HLA Alleles Associated with Slow Progression to AIDS Truly Prefer to Present HIV-1 p24. / Borghans, J. A.; Molgaard, A.; Boer, R. J. de; Kesmir, Can.

    In: PLoS ONE, No. 9, 2007, p. e920.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  243. Published

    NetMHCpan, a method for quantitative predictions of peptide binding to any HLA-A and -B locus protein of known sequence. / Nielsen, Morten; Lundegaard, Claus; Blicher, Thomas; Lamberth, K.; Harndahl, M.; Justesen, S.; Roder, G.; Peters, B.; Sette, A.; Lund, Ole; Buus, S.

    In: PLoS ONE, No. 8, 2007, p. e796.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  244. 2006
  245. Identification of genome-scale metabolic network models using experimentally measured flux profiles. / Herrgard, Markus; Fong, Stephen S.; Palsson, Bernhard Ø.

    In: P L o S One, Vol. 2, No. 7, 2006, p. e72.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

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