Biotechnology and Bioengineering (Print)

ISSNs: 0006-3592, 00063592, 1097-0290

ISSNs (Electronic): 1097-029

John/Wiley & Sons, Inc. John/Wiley & Sons Ltd., United States

ISI indexed (2013): yes, FI (2013): 2

Central database

Journal

  1. 2014
  2. Published
  3. Published

    A model‐driven quantitative metabolomics analysis of aerobic and anaerobic metabolism in E. coli K‐12 MG1655 that is biochemically and thermodynamically consistent. / McCloskey, Douglas; Gangoiti, Jon A.; King, Zachary A.; Naviaux, Robert K.; Barshop, Bruce A.; Palsson, Bernhard; Feist, Adam.

    In: Biotechnology and Bioengineering, Vol. 111, No. 4, 2014, p. 803-815.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  4. Published

    A model to assess the feasibility of shifting reaction equilibrium by acetone removal in the transamination of ketones using 2‐propylamine. / Tufvesson, Pär; Bach, Christian; Woodley, John.

    In: Biotechnology and Bioengineering, Vol. 111, No. 2, 2014, p. 309-319.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  5. Published

    Reflections on the aerobic fermentation stoichiometry of crabtree positive yeasts. / Villadsen, John; Jørgensen, Sten Bay.

    In: Biotechnology and Bioengineering (Print), Vol. 111, No. 3, 2014, p. 632-637.

    Publication: Research - peer-reviewJournal article – Annual report year: 2014

  6. 2013
  7. Published

    Cell mass and cell cycle dynamics of an asynchronous budding yeast population : Experimental observations, flow cytometry data analysis, and multi-scale modeling. / Lencastre Fernandes, Rita; Carlquist, Magnus; Lundin, Luisa; Heins, Anna-Lena; Dutta, Abhishek; Sørensen, Søren J.; Jensen, Anker Degn; Nopens, Ingmar; Eliasson Lantz, Anna; Gernaey, Krist.

    In: Biotechnology and Bioengineering (Print), Vol. 110, No. 3, 2013, p. 812-826.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  8. Published
  9. Published

    Overexpression of O‐methyltransferase leads to improved vanillin production in baker's yeast only when complemented with model‐guided network engineering. / Brochado, Ana Rita; Patil, Kiran R.

    In: Biotechnology and Bioengineering, Vol. 110, No. 2, 2013, p. 656-659.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  10. Regiospecific modifications of naringenin for astragalin production in Escherichia coli. / Malla, Sailesh; Pandey, Ramesh Prasad; Kim, Byung‐Gee; Sohng, Jae Kyung.

    In: Biotechnology and Bioengineering, Vol. 110, No. 9, 2013, p. 2525-2535.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  11. Published
  12. Published

    Scale‐up and intensification of (S)‐1‐(2‐chlorophenyl)ethanol bioproduction: Economic evaluation of whole cell‐catalyzed reduction of o‐Chloroacetophenone. / Eixelsberger, Thomas; Woodley, John; Nidetzky, Bernd; Kratzer, Regina.

    In: Biotechnology and Bioengineering, Vol. 110, No. 8, 2013, p. 2311-2315.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  13. Published

    Semi-continuous in situ magnetic separation for enhanced extracellular protease productionmodeling and experimental validation. / Cerff, M.; Scholz, A.; Käppler, T.; Ottow, Kim Ekelund; Hobley, Timothy John; Posten, C.

    In: Biotechnology and Bioengineering, Vol. 110, No. 8, 2013, p. 2161-2172.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  14. 2012
  15. Published

    An Activated Sludge Modeling Framework for Xenobiotic Trace Chemicals (ASM-X): Assessment of Diclofenac and Carbamazepine. / Plósz, Benedek; Langford, K. H.; Thomas, K. V.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 11, 2012, p. 2757-2769.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  16. Published

    Evaluation of the energy efficiency of enzyme fermentation by mechanistic modeling. / Albaek, Mads O.; Gernaey, Krist V.; Hansen, Morten S.; Stocks, Stuart M.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 4, 2012, p. 950-961.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  17. Published

    Experimental determination of thermodynamic equilibrium in biocatalytic transamination. / Tufvesson, Pär; Jensen, Jacob Skibsted; Kroutil, Wolfgang; Woodley, John M.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 8, 2012, p. 2159-2162.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  18. Published

    Genome-scale metabolic representation of Amycolatopsis balhimycina. / Vongsangnak, Wanwipa; Figueiredo, L. F.; Forster, J.; Weber, Tilmann; Thykær, Jette; Stegmann, E.; Wohlleben, W.; Nielsen, Jens.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 7, 2012, p. 1798-1807.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  19. Published

    Industrial glucoamylase fed‐batch benefits from oxygen limitation and high osmolarity. / Pedersen, Lasse; Hansen, Kim; Nielsen, Jens; Eliasson Lantz, Anna; Thykær, Jette.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 1, 2012, p. 116-124.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  20. Published
  21. Kinetic modeling of free fatty acid production in Escherichia coli based on continuous cultivation of a plasmid free strain. / Youngquist, J. Tyler; Lennen, Rebecca; Ranatunga, Don R.; Bothfeld, William H.; Marner II, Wesley D.; Pfleger, Brian F.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 6, 2012, p. 1518-1527.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  22. The design of long‐term effective uranium bioremediation strategy using a community metabolic model. / Zhuang, Kai; Ma, E.; Lovley, Derek R.; Mahadevan, Radhakrishnan.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 10, 2012, p. 2475-2483.

    Publication: Research - peer-reviewJournal article – Annual report year: 2013

  23. Published

    Tools for characterizing the whole‐cell bio‐oxidation of alkanes at microscale. / Grant, Chris; da Silva Damas Pinto, Ana Catarina; Lui, Hai‐Po; Woodley, John M.; Baganz, Frank.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 9, 2012, p. 2179-2189.

    Publication: Research - peer-reviewJournal article – Annual report year: 2012

  24. 2011
  25. Published
  26. Published

    Modeling enzyme production with Aspergillus oryzae in pilot scale vessels with different agitation, aeration, and agitator types. / Albæk, Mads Orla; Gernaey, Krist; Hansen, Morten S.; Stocks, Stuart M.

    In: Biotechnology and Bioengineering (Print), Vol. 108, No. 8, 2011, p. 1828-1840.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  27. Published
  28. Published

    Simultaneous hydrogen utilization and in situ biogas upgrading in an anaerobic reactor. / Luo, Gang; Johansson, Sara; Boe, Kanokwan; Xie, Li; Zhou, Qi; Angelidaki, Irini.

    In: Biotechnology and Bioengineering (Print), Vol. 109, No. 4, 2011, p. 1088-1094.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  29. Published
  30. Published

    Topology optimized microbioreactors. / Schäpper, Daniel; Lencastre Fernandes, Rita; Eliasson Lantz, Anna; Okkels, Fridolin; Bruus, Henrik; Gernaey, Krist.

    In: Biotechnology and Bioengineering (Print), Vol. 108, No. 4, 2011, p. 786-796.

    Publication: Research - peer-reviewJournal article – Annual report year: 2011

  31. 2010
  32. Published
  33. A process for microbial hydrocarbon synthesis : Overproduction of fatty acids in Escherichia coli and catalytic conversion to alkanes. / Lennen, Rebecca; Braden, Drew J.; West, Ryan M.; Dumesic, James A.; Pfleger, Brian F.

    In: Biotechnology and Bioengineering (Print), Vol. 106, No. 2, 2010, p. 193-202.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  34. Published
  35. Published

    Enhancement of Farnesyl Diphosphate Pool as Direct Precursor of Sesquiterpenes Through Metabolic Engineering of the Mevalonate Pathway in Saccharomyces cerevisiae. / Asadollahi, Mohammadali; Maury, Jerome; Schalk, M.; Clark, A.; Nielsen, J.

    In: Biotechnology and Bioengineering (Print), Vol. 106, No. 1, 2010, p. 86-96.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  36. Published

    Implementation of communication-mediating domains for non-ribosomal peptide production in Saccharomyces cerevisiae. / Siewers, Verena; San-Bento, Rita; Nielsen, Jens.

    In: Biotechnology and Bioengineering (Print), Vol. 106, No. 5, 2010, p. 841-844.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  37. Published
  38. Published

    Substrate uptake, phosphorus repression, and effect of seed culture on glycopeptide antibiotic production : Process model development and experimental validation. / Maiti, Soumen K.; Singh, Kamaleshwar P.; Eliasson Lantz, Anna; Bhushan, Mani; Wangikar, Pramod P.

    In: Biotechnology and Bioengineering (Print), Vol. 105, No. 1, 2010, p. 109-120.

    Publication: Research - peer-reviewJournal article – Annual report year: 2010

  39. 2009
  40. Published

    In Silico Genome-Scale Reconstruction and Validation of the Corynebacterium glutamicum Metabolic Network. / Kjeldsen, Kjeld Raunkjær; Nielsen, J.

    In: Biotechnology and Bioengineering (Print), Vol. 102, No. 2, 2009, p. 583-597.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  41. In silico strategy to rationally engineer metabolite production: A case study for threonine in Escherichia coli. / Rodríguez-Prados, Juan-Carlos; de Atauri, Pedro; Maury, Jerome; Ortega, Fernando; Portais, Jean-Charles; Chassagnole, Christophe; Acerenza, Luis; Lindley, Nic D.; Cascante, Marta.

    In: Biotechnology and Bioengineering, Vol. 103, No. 3, 2009, p. 609-620.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  42. Published

    In Situ Magnetic Separation for Extracellular Protein Production. / Kappler, T.; Cerff, Martin; Ottow, Kim Ekelund; Hobley, Timothy John; Posten, C.

    In: Biotechnology and Bioengineering (Print), Vol. 102, No. 2, 2009, p. 535-545.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  43. Published

    Introduction. / Villadsen, John.

    In: Biotechnology and Bioengineering (Print), Vol. 104, 2009, p. 617-617.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  44. Published

    Physiology of Aspergillus niger in Oxygen-Limited Continuous Cultures: Influence of Aeration, Carbon Source Concentration and Dilution Rate. / Diano, Audrey; Peeters, J.; Dynesen, Jens Østergaard; Nielsen, J.

    In: Biotechnology and Bioengineering (Print), Vol. 103, No. 5, 2009, p. 956-965.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  45. Published

    Selective Bioparticle Retention and Characterization in a Chip-Integrated Confocal Ultrasonic Cavity. / Svennebring, J.; Manneberg, O.; Skafte-Pedersen, Peder; Bruus, Henrik; Wiklund, M.

    In: Biotechnology and Bioengineering (Print), Vol. 103, No. 2, 2009, p. 323-328.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  46. Published

    The effect of hydroxylamine on the activity and aggregate structure of autotrophic nitrifying bioreactor cultures. / Harper, W.F.; Terada, Akihiko; Poly, F.; Le roux, X.; Kristensen, Ken; Mazher, M.; Smets, Barth F.

    In: Biotechnology and Bioengineering (Print), Vol. 102, No. 3, 2009, p. 714-724.

    Publication: Research - peer-reviewJournal article – Annual report year: 2009

  47. 2008
  48. Published

    A critical comparison of extant batch respirometric and substrate depletion assays for estimation of nitrification biokinetics. / Chandran, K.; Hu, Z; Smets, Barth F.

    In: Biotechnology and Bioengineering (Print), Vol. 101, No. 1, 2008, p. 62-72.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  49. Published

    An efficient approach to automate the manual trial and error calibration of activated sludge models. / Sin, Gürkan; Pauw, Dirk J.W. de; Weijers, Stefan; Vanrolleghem, Peter A.

    In: Biotechnology and Bioengineering (Print), Vol. 100, No. 3, 2008, p. 516-528.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  50. Published
  51. Published

    Characterization of enzymatic D-xylulose 5-phosphate synthesis. / Shaeri, J.; Wright, I.; Rathbone, E. B.; Wohlgemuth, R.; Woodley, John.

    In: Biotechnology and Bioengineering (Print), Vol. 101, No. 4, 2008, p. 761-767.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  52. Published

    Comparison of SHF and SSF processes from steam-exploded wheat straw for ethanol production by xylose-fermenting and robust glucose-fermenting Saccharomyces cerevisiae strains. / Tomas Pejo, Elia; Oliva, Jose M.; Ballesteros, Mercedes; Olsson, Lisbeth.

    In: Biotechnology and Bioengineering (Print), Vol. 100, No. 6, 2008, p. 1122-1131.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  53. Published

    Effect of humic acids on electricity generation integrated with xylose degradation in microbial fuel cells. / Huang, Liping; Angelidaki, Irini.

    In: Biotechnology and Bioengineering (Print), Vol. 100, No. 3, 2008, p. 413-422.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  54. Published
  55. Published
  56. Published

    Multivariate models for prediction of rheological characteristics of filamentous fermentation broth from the size distribution. / Petersen, Nanna; Stocks, S.; Gernaey, Krist.

    In: Biotechnology and Bioengineering (Print), Vol. 100, No. 1, 2008, p. 61-71.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  57. Published
  58. Published

    Simultaneous saccharification and fermentation of steam-pretreated bagasse using Saccharomyces cerevisiae TMB3400 and Pichia stipitis CBS6054. / Rudolf, Andreas; Baudel, H.; Zacchi, G.; Hahn-Hagerdal, B.; Liden, G.

    In: Biotechnology and Bioengineering (Print), Vol. 99, No. 4, 2008, p. 783-790.

    Publication: Research - peer-reviewJournal article – Annual report year: 2008

  59. Published
  60. Published
  61. 2007
  62. Published

    A comparison of direct infusion MS and GC-MS for metabolic footprinting of yeast mutants.. / Mass, S.; Villas-Bôas, Silas Granato; Hansen, Michael Adsetts Edberg; Ålesson, M; Nielsen, Jens.

    In: Biotechnology and Bioengineering (Print), Vol. 96, No. 5, 2007, p. 1014-1022.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  63. Published

    Anaerobic digestion of solid material : multidimensional modelling of continuous-flow reactor with non-uniform influent concentration distributions. / Vavilin, V.A.; Lokshina, L.Y.; Flotats, X.; Angelidaki, Irini.

    In: Biotechnology and Bioengineering (Print), Vol. 97, No. 2, 2007, p. 354-366.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  64. Published

    An innovative online VFA monitoring system for the anerobic process, based on headspace gas chromatography. / Boe, Kanokwan; Batstone, Damien J.; Angelidaki, Irini.

    In: Biotechnology and Bioengineering, Vol. 96, No. 4, 2007, p. 712-721.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  65. Published

    A systems biology approach to study glucose repression in the yeast Saccharomyces cerevisiae. / Westergaard, Steen Lund; Soberano de Oliveira, Ana Paula; Bro, Christoffer; Olsson, Lisbeth; Nielsen, Jens.

    In: Biotechnology and Bioengineering (Print), Vol. 96, No. 1, 2007, p. 134-145.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  66. Published
  67. Published
  68. Published

    Effect of compounds released during pretreatment of wheat straw on microbial growth and enzymatic hydrolysis rates. / Panagiotou, Gianni; Olsson, Lisbeth.

    In: Biotechnology and Bioengineering, Vol. 96, No. 2, 2007, p. 250-258.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  69. Published
  70. Published

    Identification of flux regulation coefficients from elementary flux modes: A systems biology tool for analysis of metabolic networks. / Nookaew, Intawat; Meechai, A.; Thammarongtham, C.; Loateng, K.; Ruanglek, V.; Cheevadhanarak, S.; Nielsen, Jens; Bhumiratana, S.

    In: Biotechnology and Bioengineering, Vol. 97, No. 6, 2007, p. 1535-1549.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  71. Published

    Optimal fed-batch cultivation when mass transfer becomes limiting. / Villadsen, John; Patil, Kiran Raosaheb.

    In: Biotechnology and Bioengineering, Vol. 98, No. 3, 2007, p. 706-710.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  72. Published
  73. Published

    Oxidation of lactose to lactobionic acid by a Microdochium nivale carbohydrate oxidase: Kinetics and operational stability. / Nordkvist, Mikkel; Nielsen, Per Munk; Villadsen, John.

    In: Biotechnology and Bioengineering, Vol. 97, No. 4, 2007, p. 694 - 707.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  74. Published
  75. Published
  76. Published

    Scale-up of enzymatic production of lactobionic acid using the rotary jet head system. / Hua, Ling; Nordkvist, Mikkel; Nielsen, P. M.; Villadsen, John.

    In: Biotechnology and Bioengineering (Print), Vol. 97, No. 4, 2007, p. 842-849.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  77. Solvent-Free Enzymatic Synthesis of Fatty Alkanolamides. / Tufvesson, Pär; Annerling, Annika; Hatti-Kaul, Rajni; Adlercreutz, Dietlind.

    In: Biotechnology and Bioengineering (Print), Vol. 97, No. 3, 2007, p. 447-453.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  78. Published

    Understanding signaling in yeast: Insights from network analysis.. / Arga, K.Y; Onsan, Z.I; Kirdar, B.; Ulgen, K.O; Nielsen, Jens.

    In: Biotechnology and Bioengineering (Print), No. 97, 2007, p. 1246-1258.

    Publication: Research - peer-reviewJournal article – Annual report year: 2007

  79. 2006
  80. Published
  81. Mode of action and properties of the ß-xylosidases from Talaromyces emersonii and Trichoderma reesei. / Rasmussen, Louise Enggaard; Sørensen, Hanne; Vind, Jesper; Viksø-Nielsen, Anders.

    In: Biotechnology and Bioengineering, Vol. 94, No. 5, 2006, p. 869-876.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

  82. On oxygen limitation in a whole-cell biocatalytic Baeyer-Villiger oxidation process. / Baldwin, CVF; Woodley, John.

    In: Biotechnology and Bioengineering, Vol. 95, No. 3, 2006, p. 362-369.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

  83. On the influence of oxygen and cell concentration in an SFPR whole-cell biocatalytic Baeyer-Villiger oxidation process. / Hilker, I; Baldwin, C; Alphand, V; Furstoss, R; Woodley, John; Wohlgemuth, R.

    In: Biotechnology and Bioengineering, Vol. 93, No. 6, 2006, p. 1138-1144.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

  84. Published

    Oxidation of aminonitrotoluenes by 2,4-DNT dioxygenase of Burkholderia sp. strain DNT. / Leungsakul, T.; Keenan, B.G.; Mori, M.; Morton, M.D.; Stuart, J.D.; Smets, Barth F.; Wood, T.K.

    In: Biotechnology and Bioengineering, Vol. 93, No. 2, 2006, p. 231-237.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

  85. Published

    Polyol synthesis in Aspergillus niger : influence of oxygen availability, carbon and nitrogen sources on the metabolism.. / Diano, Audrey; Bekker-Jensen, S; Dynesen, Jens Østergaard; Nielsen, Jens.

    In: Biotechnology and Bioengineering (Print), Vol. 94, No. 5, 2006, p. 899-908.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

  86. Published

    Responses of the biogas process to pulses of oleate in reactors treating mixtures of cattle and pig manure. / Nielsen, Henrik Bjørn; Ahring, Birgitte Kiær.

    In: Biotechnology and Bioengineering, Vol. 95, No. 1, 2006, p. 96-105.

    Publication: Research - peer-reviewJournal article – Annual report year: 2006

  87. 2005
  88. Published

    Anaerobic degradation of solid material : Importance of initiation centers for methanogenesis, mixing intensity, and 2D distributed model. / Vavilin, V.A.; Angelidaki, Irini.

    In: Biotechnology and Bioengineering (Print), Vol. 89, No. 1, 2005, p. 113-122.

    Publication: Research - peer-reviewJournal article – Annual report year: 2005

  89. A new approach for modelling simultaneous storage and growth processes for activated sludge systems under aerobic conditions. / Sin, Gürkan; Guisasola, A; de Pauw, DJW; Baeza, JA; Carrera, J; Vanrolleghem, PA.

    In: Biotechnology and Bioengineering, Vol. 92, No. 5, 2005, p. 600-613.

    Publication: Research - peer-reviewJournal article – Annual report year: 2005

  90. Published

    A Novel Process Configuration for Anaerobic Digestion of Source-Sorted Household Waste Using Hyper-Thermophilic Post-Treatment. / Hartmann, H.; Ahring, Birgitte Kiær.

    In: Biotechnology and Bioengineering, Vol. 90, No. 7, 2005, p. 830-837.

    Publication: Research - peer-reviewJournal article – Annual report year: 2005

  91. Published
  92. Published

    A Well-mixed, Polymer-based Microbioreactor with Integrated Optical Measurements. / Zhang, Z.; Szita, Nicolas; Boccazzi, P.; Sinskey, A.J.; Jensen, K.F.

    In: Biotechnology and Bioengineering (Print), Vol. 93, No. 2, 2005, p. 286-296.

    Publication: Research - peer-reviewJournal article – Annual report year: 2005

  93. Published
  94. Published

    Hydraulics of laboratory and full-scale upflow anaerobic sludge blanket (UASB) reactors. / Batstone, Damien J.; Hernandez, J.L.A.; Schmidt, Jens Ejbye.

    In: Biotechnology and Bioengineering (Print), Vol. 91, No. 3, 2005, p. 387-391.

    Publication: Research - peer-reviewJournal article – Annual report year: 2005

  95. Published

    Metabolite profiling for analysis of yeast stress response during very high gravity ethanol fermentations. / Devantier, Rasmus; B. Scheithauer, S.G; Villas-Bôas, Silas Granato; Pedersen, S; Olsson, Lisbeth.

    In: Biotechnology and Bioengineering, Vol. 90, No. 6, 2005, p. 703-714.

    Publication: Research - peer-reviewJournal article – Annual report year: 2005

  96. Published

    Saturation mutagenesis of 2,4-DNT dioxygenase of Burkholderia sp. strain DNT for enhanced dinotrotoluene degradation. / Leungsakul, T.; Keenan, B.G.; Yin, H.; Smets, Barth F.; Wood, T.K.

    In: Biotechnology and Bioengineering (Print), Vol. 92, No. 4, 2005, p. 416-426.

    Publication: Research - peer-reviewJournal article – Annual report year: 2005

  97. Published

    Shikimic acid production by a modified strain of E. coli (W3110.shik1) under phosphate-limited and carbon-limited conditions (p n/a). / Johansson, L; Lindskog, L; Silfversparre, G; Cimander, C; Nielsen, Kristian Fog; Lidén, G.

    In: Biotechnology and Bioengineering, Online, Vol. 92, 2005, p. 541-552.

    Publication: Research - peer-reviewJournal article – Annual report year: 2005

  98. 2004
  99. Published
  100. Published

    Fermentation performance of engineered and evolved xylose-fermenting Saccharomyces cerevisiae strains. / Sonderegger, M.; Jeppsson, M.; Larsson, C.; Gorwa-Grauslund, M.F.; Boles, E.; Olsson, Lisbeth; Spencer-Martins, I.; Hahn-Hagerdal, B.; Sauer, U.

    In: Biotechnology and Bioengineering, Vol. 87, No. 1, 2004, p. 90-98.

    Publication: Research - peer-reviewJournal article – Annual report year: 2004

  101. Published

    Genome-wide transcriptional response of a Saccharomyces cerevisiae strain with an altered redox metabolism. / Bro, Christoffer; Regenberg, Birgitte; Nielsen, Jens.

    In: Biotechnology and Bioengineering, Vol. 85, No. 3, 2004, p. 269-276.

    Publication: Research - peer-reviewJournal article – Annual report year: 2004

  102. Published

    Glucose metabolism in the antibiotic producing actinomycete Nonomuraea sp ATCC 39727. / Gunnarsson, Nina; Bruheim, Per; Nielsen, Jens.

    In: Biotechnology and Bioengineering, Vol. 88, No. 5, 2004, p. 652-663.

    Publication: Research - peer-reviewJournal article – Annual report year: 2004

  103. Published

    High solid simultaneous saccharification and fermentation of wet oxidized corn stover to ethanol. / Varga, E.; Klinke, H.B.; Reczey, K.; Thomsen, A.B.

    In: Biotechnology and Bioengineering, Vol. 88, No. 5, 2004, p. 567-574.

    Publication: Research - peer-reviewJournal article – Annual report year: 2004

  104. Published
  105. Published

    Superparamagnetic adsorbents for high-gradient magnetic fishing of lectins out of legume extracts. / Heebøll-Nielsen, Anders; Dalkiær, M.; Hubbuch, Jürgen; Thomas, Owen R. T.

    In: Biotechnology and Bioengineering, Vol. 87, No. 3, 2004, p. 311-323.

    Publication: Research - peer-reviewJournal article – Annual report year: 2004

  106. Published

    Thermal and enzymatic pretreatment of sludge containing phthalate esters prior to mesophilic anaerobic digestion. / Gavala, Hariklia N.; Yenal, U.; Ahring, Birgitte Kiær.

    In: Biotechnology and Bioengineering, Vol. 85, No. 5, 2004, p. 561-567.

    Publication: Research - peer-reviewJournal article – Annual report year: 2004

  107. Published

    Transient Response of Aerobic and Anoxic Activated Sludge Activities to Sudden Substrate Concentration Changes. / Sin, G.; Vanrolleghem, P.A.; Gernaey, Krist.

    In: Biotechnology and Bioengineering, Vol. 86, No. 3, 2004, p. 277-290.

    Publication: Research - peer-reviewJournal article – Annual report year: 2004

  108. 2003
  109. Published

    A new VFA sensor technique for anaerobic reactor systems. / Pind, Peter Frode; Angelidaki, Irini; Ahring, Birgitte Kiær.

    In: Biotechnology and Bioengineering (Print), Vol. 82, No. 1, 2003, p. 54-61.

    Publication: Research - peer-reviewJournal article – Annual report year: 2003

  110. Published
  111. Published
  112. Published

    Dynamics of the anaerobic process: Effects of volatile fatty acids. / Pind, Peter Frode; Angelidaki, Irini; Ahring, Birgitte Kiær.

    In: Biotechnology and Bioengineering, Vol. 82, No. 7, 2003, p. 791-801.

    Publication: Research - peer-reviewJournal article – Annual report year: 2003

  113. Published

    Effect of deletion of chitin synthase genes on mycelial morphology and culture viscosity in Aspergillus oryzae. / Müller, Christian; Hansen, K.; Szabo, Peter; Nielsen, Jens.

    In: Biotechnology and Bioengineering (Print), Vol. 81, No. 5, 2003, p. 525-534.

    Publication: Research - peer-reviewJournal article – Annual report year: 2003

  114. Published

    Enzymatic hydrolysis of water-soluble wheat arabinoxylan. 1. Synergy between alpha-L-arabinofuranosidases, endo-1,4-beta-xylanases, and beta-xylosidase activities. / Sørensen, H.R.; Meyer, Anne Boye Strunge; Pedersen, S.

    In: Biotechnology and Bioengineering, Vol. 81, No. 6, 2003, p. 726-731.

    Publication: Research - peer-reviewJournal article – Annual report year: 2003

  115. Published
  116. Published
  117. Measurement of strain-dependent toxicity in the indene bioconversion using multi-parameter flow cytometry. / Amanullah, A; Hewitt, CJ; Nienow, AW; Lee, C; Chartrain, M; Buckland, BC; Drew, SW; Woodley, John.

    In: Biotechnology and Bioengineering, Vol. 81, No. 4, 2003, p. 405-420.

    Publication: Research - peer-reviewJournal article – Annual report year: 2003

  118. Published

    Potential inhibitors from wet oxidation of wheat straw and their effect on ethanol production of Saccharomyces cerevisiae : Wet oxidation and fermentation by yeast. / Klinke, H.B.; Olsson, L.; Thomsen, A.B.; Ahring, B.K.

    In: Biotechnology and Bioengineering, Vol. 81, No. 6, 2003, p. 738-747.

    Publication: Research - peer-reviewJournal article – Annual report year: 2003

  119. Published
  120. Published

    Production of savinase and population viability of Bacillus clausii during high-cell-density fed-batch cultivations. / Christiansen, Torben; Michaelsen, S.; Wumpelmann, M.; Nielsen, Jens.

    In: Biotechnology and bioengineering, Vol. 83, No. 3, 2003, p. 344-352.

    Publication: Research - peer-reviewJournal article – Annual report year: 2003

  121. Published
  122. 2002
  123. Published
  124. Published

    A functional genomics approach using metabolomics and in silico pathway analysis. / Förster, Jochen; Gombert, Andreas Karoly; Nielsen, Jens.

    In: Biotechnology and Bioengineering (Print), Vol. 79, No. 7, 2002, p. 703-712.

    Publication: Research - peer-reviewJournal article – Annual report year: 2002

  125. Published
  126. Application of multi-parameter flow cytometry using fluorescent probes to study substrate toxicity in the indene bioconversion. / Amanullah, A; Hewitt, CJ; Nienow, AW; Lee, C; Chartrain, M; Buckland, BC; Drew, SW; Woodley, John.

    In: Biotechnology and Bioengineering, Vol. 80, No. 3, 2002, p. 239-249.

    Publication: Research - peer-reviewJournal article – Annual report year: 2002

  127. Published
  128. Published

    High-gradient magnetic affinity separation of trypsin from porcine pancreatin. / Hubbuch, Jürgen; Thomas, Owen R. T.

    In: Biotechnology and Bioengineering, Vol. 79, No. 3, 2002, p. 301-313.

    Publication: Research - peer-reviewJournal article – Annual report year: 2002

  129. Published

    Modeling Aerobic Carbon Source Degradation Processes using Titrimetric Data and Combined Respirometric-Titrimetric Data: Experimental Data and Model Structure. / Gernaey, Krist; Petersen, B.; Nopens, I.; Comeau, Y.; Vanrolleghem, P.A.

    In: Biotechnology and Bioengineering, Vol. 79, No. 7, 2002, p. 741-753.

    Publication: Research - peer-reviewJournal article – Annual report year: 2002

  130. Published

    Modeling Aerobic Carbon Source Degradation Processes using Titrimetric Data and Combined Respirometric-Titrimetric Data: Structural and Practical Identifiability. / Gernaey, Krist; Petersen, B.; Dochain, D.; Vanrolleghem, P.A.

    In: Biotechnology and Bioengineering, Vol. 79, No. 7, 2002, p. 754-767.

    Publication: Research - peer-reviewJournal article – Annual report year: 2002

  131. Published

    Production of teicoplanin by Actinoplanes teichomyceticus in continuous fermentation. / Vara, A.G.; Hochkoepple, A.; Nielsen, Jens; Villadsen, John.

    In: Biotechnology and Bioengineering, Vol. 77, No. 5, 2002, p. 589-598.

    Publication: Research - peer-reviewJournal article – Annual report year: 2002

  132. Published

    The simultaneous biosynthesis and uptake of amino acids by Lactococcus lactis studied by C-13-labeling experiments. / Jensen, N.B.S.; Christensen, B.; Nielsen, Jette; Villadsen, John.

    In: Biotechnology and bioengineering, Vol. 78, No. 1, 2002, p. 11-16.

    Publication: Research - peer-reviewJournal article – Annual report year: 2002

  133. The use of microscale processing technologies for quantification of biocatalytic Baeyer-Villiger oxidation kinetics. / Doig, GJ; Pickering, SCR; Lye, GJ; Woodley, John.

    In: Biotechnology and Bioengineering, Vol. 80, No. 1, 2002, p. 42-49.

    Publication: Research - peer-reviewJournal article – Annual report year: 2002

  134. Use of isolated cyclohexanone monooxygenase from recombinant Escherichia coli as a biocatalyst for Baeyer-Villiger and sulfide oxidations. / Zambianchi, F; Pasta, P; Carrea, G; Colonna, S; Gaggero, N; Woodley, John.

    In: Biotechnology and Bioengineering (Print), Vol. 78, No. 5, 2002, p. 489-496.

    Publication: Research - peer-reviewJournal article – Annual report year: 2002

  135. 2001
  136. Published
  137. Published

    Glycogen metabolism in aerobic mixed cultures. / Dircks, Klaus; Beun, J.J.; van Loosdrecht, M.C.M.; Heijnen, J.; Henze, Mogens.

    In: Biotechnology and Bioengineering, Vol. 73, No. 2, 2001, p. 85-94.

    Publication: Research - peer-reviewJournal article – Annual report year: 2001

  138. Published

    In vivo dynamics of galactose metabolism in Saccharomyces cerevisiae: Metabolic fluxes and metabolite levels. / Østergaard, Simon; Olsson, Lisbeth; Nielsen, Jens.

    In: Biotechnology and Bioengineering, Vol. 73, No. 5, 2001, p. 412-425.

    Publication: Research - peer-reviewJournal article – Annual report year: 2001

  139. Published

    Possible complication regarding phosphorus removal with a continuous flow biofilm system: Diffusion limitation. / Falkentoft, C.M.; Arnz, P.; Henze, Mogens; Mosbæk, Hans; Müller, E.; Wilderer, P.A.; Harremoës, Poul.

    In: Biotechnology and Bioengineering (Print), Vol. 76, No. 1, 2001, p. 77-85.

    Publication: Research - peer-reviewJournal article – Annual report year: 2001

  140. Published
  141. 2000
  142. Published

    Metabolic network analysis of Penicillium chrysogenum using C-13-labeled glucose. / Christensen, Bjarke; Nielsen, Jens.

    In: Biotechnology and Bioengineering, Vol. 68, No. 6, 2000, p. 652-659.

    Publication: Research - peer-reviewJournal article – Annual report year: 2000

  143. Published
  144. Published

    Role of substrate concentration in mitosis and hyphal extension of Aspergillus. / Müller, Christian; Spohr, Anders Bendsen; Nielsen, Jens.

    In: Biotechnology and Bioengineering, Vol. 67, No. 4, 2000, p. 390-397.

    Publication: Research - peer-reviewJournal article – Annual report year: 2000

  145. 1999
  146. Published

    A comprehensive model of anaerobic bioconversion of complex substrates to biogas. / Angelidaki, Irini; Ellegaard, Lars; Ahring, Birgitte Kiær.

    In: Biotechnology and Bioengineering, Vol. 63, No. 3, 1999, p. 363-372.

    Publication: Research - peer-reviewJournal article – Annual report year: 1999

  147. Alkaline biocatalysis for the direct synthesis of N-acetyl-D-neuraminic acid (Neu5Ac) from N-acetyl-D-glucosamine (GlcNAc). / Blayer, S; Woodley, John; Dawson, MJ; Lilly, MD.

    In: Biotechnology and Bioengineering (Print), Vol. 66, No. 2, 1999, p. 131-136.

    Publication: Research - peer-reviewJournal article – Annual report year: 1999

  148. Published
  149. Published

    Kinetics of alpha-amylase secretion in Aspergillus oryzae. / Henriksen, Anne Laurence Santerre; Carlsen, Morten; Bang de, H.; Nielsen, Jens Bredal.

    In: Biotechnology and Bioengineering, Vol. 65, No. 1, 1999, p. 76-82.

    Publication: Research - peer-reviewJournal article – Annual report year: 1999

  150. Published

    On-line study of growth kinetics of single hyphae of Aspergillus oryzae in a flow-through cell. / Christiansen, Torben; Spohr, Anders Bendsen; Nielsen, Jens Bredal.

    In: Biotechnology and Bioengineering, Vol. 63, No. 2, 1999, p. 147-153.

    Publication: Research - peer-reviewJournal article – Annual report year: 1999

  151. Understanding the influence of temperature and cosolvent addition on the rate of enzymatic suspension reactions based on regime analysis.. / Wolff, Anders; Zhu, L.; Wong, Y.W.; Straathof, A.J.J.; Jongejan, J.A.; Heijnen, J.J.

    In: Biotechnology and Bioengineering (Print), Vol. 62, 1999, p. 125-134.

    Publication: Research - peer-reviewJournal article – Annual report year: 1999

  152. 1998
  153. Published

    Artificial Promoters for Metabolic Optimization. / Jensen, Peter Ruhdal; Hammer, Karin.

    In: Biotechnology and Bioengineering, Vol. 58, No. 2-3, 1998, p. 191-195.

    Publication: Research - peer-reviewJournal article – Annual report year: 1998

  154. Published

    C-13 Tracer experiments and metabolite balancing for metabolic flux analysis : Comparing two approaches. / Schmidt, Karsten; Marx, A.; de Graaf, A. A.; Wiechert, W.; Sahm, H.; Nielsen, Jens Bredal; Villadsen, John.

    In: Biotechnology and Bioengineering, Vol. 58, No. 2-3, 1998, p. 254-257.

    Publication: Research - peer-reviewJournal article – Annual report year: 1998

  155. Published
  156. Published

    Metabolic Engineering: Techniques for analysis of targets for genetic manipulations. / Nielsen, Jens Bredal.

    In: Biotechnology and Bioengineering, Vol. 58, No. 2-3, 1998, p. 125-132.

    Publication: Research - peer-reviewJournal article – Annual report year: 1998

  157. Published
  158. Published

    On-line study of fungal morphology during submerged growth in a small flow-through cell.. / Spohr, Anders Bendsen; Dam Mikkelsen, C.; Carlsen, Morten; Nielsen, Jens Bredal; Villadsen, John.

    In: Biotechnology and Bioengineering, Vol. 58, No. 5, 1998, p. 541-553.

    Publication: Research - peer-reviewJournal article – Annual report year: 1998

  159. Published

    Simple generic model for dynamic experiments with Saccharomyces cerevisiae in continuous culture. Decoupling between anabolism and catabolism.. / Duboc, Philippe Jean; von Stockar, U.; Villadsen, John.

    In: Biotechnology and Bioengineering, Vol. 60, No. 2, 1998, p. 180-189.

    Publication: Research - peer-reviewJournal article – Annual report year: 1998

  160. 1997
  161. Published
  162. Boron based separations for in situ recovery of L-erythrulose from transketolase-catalyzed condensation. / Chauhan, RP; Powell, LW; Woodley, John.

    In: Biotechnology and Bioengineering (Print), Vol. 56, No. 3, 1997, p. 345-351.

    Publication: Research - peer-reviewJournal article – Annual report year: 1997

  163. Published
  164. Published
  165. Simple dissolution‐reaction model for enzymatic conversion of suspension of solid substrate. / Wolff, Anders; Zhu, L.; Kielland, V.; Straathof, A.J.J.; Jongejan, J.A.; Heijnen, J.J.

    In: Biotechnology and Bioengineering (Print), Vol. 56, No. 4, 1997, p. 433-440.

    Publication: Research - peer-reviewJournal article – Annual report year: 1997

  166. 1996
  167. Published

    Correlations for the partition behavior of proteins in aqueous two-phase systems : Effect of overall protein concentration. / Schmidt, A.S.; Andrews, B.A.; Asenjo, J.A.

    In: Biotechnology and Bioengineering, Vol. 50, No. 6, 1996, p. 617-626.

    Publication: ResearchJournal article – Annual report year: 1996

  168. Published

    Granular sludge formation in upflow anaerobic sludge blanket (USAB) reactors. / Schmidt, J.E.; Ahring, B.K.

    In: Biotechnology and Bioengineering (Print), Vol. 49, 1996, p. 229 - 246.

    Publication: Research - peer-reviewJournal article – Annual report year: 1996

  169. Published
  170. Published
  171. Published

    Pathway kinetics and metabolic control analysis of a high-yielding strain of Penicillium chrysogenum during fed-batch cultivations. / Pissarra, Pedro de N.; Nielsen, Jens Bredal; Bazin, M. J.

    In: Biotechnology and Bioengineering, Vol. 51, No. 2, 1996, p. 168-176.

    Publication: Research - peer-reviewJournal article – Annual report year: 1996

  172. Published

    Pretreatment of wheat straw using combined wet oxidation and alkaline hydrolysis resulting in convertible cellulose and hemicellulose. / Bjerre, A.B.; Bjerring Olesen, A.; Fernqvist, T.; Plöger, A.; Schmidt, A.S.

    In: Biotechnology and Bioengineering, Vol. 49, No. 5, 1996, p. 568-577.

    Publication: ResearchJournal article – Annual report year: 1996

  173. Published

    Semi-on-line analysis for fast and precise monitoring of bioreaction processes.. / Christensen, L.H.; Marcher, J.; Schulze, Ulrik; Carlsen, Morten; Min, R.W.; Nielsen, Jens Bredal; Villadsen, John.

    In: Biotechnology and Bioengineering, Vol. 52, No. 2, 1996, p. 237-247.

    Publication: Research - peer-reviewJournal article – Annual report year: 1996

  174. 1993
  175. Published

    A Mathematical Model for Dynamic Simulation of Anaerobic Digestion of Complex Substrates : Focusing on Ammonia Inhibition. / Angelidaki, Irini; Ellegaard, L.; Ahring, Birgitte Kiær.

    In: Biotechnology and Bioengineering (Print), Vol. 42, 1993, p. 159-166.

    Publication: Research - peer-reviewJournal article – Annual report year: 1993

  176. Published

    Rheological characterization of media containing Penicillium chrysogenum. / Pedersen, Annemarie Gade; Bundgaard-Nielsen, Mikael; Nielsen, Jens; Villadsen, John; Hassager, Ole.

    In: BIOTECHNOLOGY AND BIOENGINEERING, Vol. 41, No. 1, 1993, p. 162-164.

    Publication: Research - peer-reviewJournal article – Annual report year: 1993

  177. 1991
  178. Lewis cell studies to determine reactor design data for two-liquid phase bacterial and enzymatic reactions. / Woodley, John; Brazier, AJ; Lilly, MD.

    In: Biotechnology and Bioengineering (Print), Vol. 37, No. 2, 1991, p. 133-140.

    Publication: Research - peer-reviewJournal article – Annual report year: 1991

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